Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004235g0010 Nicotiana tabacum HOM05D005370 ORTHO05D006659 6.5e-38 160.2 81 100.0
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 1.6e-23 112.5 62 93.5
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 3.5e-23 111.3 62 91.9
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.7e-22 109.0 62 88.7
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.7e-22 109.0 62 88.7
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 2.3e-22 108.6 62 88.7
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 3.9e-22 107.8 71 74.6
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 3.9e-22 107.8 62 87.1
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 3.9e-22 107.8 62 87.1
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 3.9e-22 107.8 62 88.7
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 5.0e-22 107.5 62 87.1
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 6.6e-22 107.1 62 88.7
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 6.6e-22 107.1 62 88.7
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 6.6e-22 107.1 62 88.7
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 1.1e-21 106.3 62 85.5
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 1.1e-21 106.3 62 85.5
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 1.5e-21 105.9 62 85.5
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 1.9e-21 105.5 62 83.9
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 1.9e-21 105.5 62 85.5
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 2.5e-21 105.1 62 85.5
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 2.5e-21 105.1 62 83.9
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 5.6e-21 104.0 62 82.3
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 5.6e-21 104.0 62 85.5
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 5.6e-21 104.0 62 83.9
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 5.6e-21 104.0 62 83.9
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 5.6e-21 104.0 62 82.3
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 7.3e-21 103.6 62 82.3
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 9.5e-21 103.2 62 80.6
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 9.5e-21 103.2 62 80.6
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 9.5e-21 103.2 62 83.9
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 9.5e-21 103.2 62 82.3
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 1.2e-20 102.8 62 82.3
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.2e-20 102.8 62 82.3
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 1.2e-20 102.8 62 82.3
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 2.1e-20 102.1 62 80.6
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 2.1e-20 102.1 62 82.3
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 2.1e-20 102.1 62 82.3
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 2.1e-20 102.1 62 83.9
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 2.8e-20 101.7 62 80.6
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 2.8e-20 101.7 62 80.6
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 2.8e-20 101.7 62 83.9
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 3.6e-20 101.3 62 80.6
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 3.6e-20 101.3 62 80.6
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 4.7e-20 100.9 62 79.0
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 4.7e-20 100.9 62 80.6
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 4.7e-20 100.9 63 79.4
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 6.2e-20 100.5 62 77.4
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 6.2e-20 100.5 62 80.6
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 8.0e-20 100.1 62 77.4
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 8.0e-20 100.1 62 77.4
Cc01_g05510 Coffea canephora HOM05D005370 ORTHO05D006659 8.0e-20 100.1 59 84.7
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 8.0e-20 100.1 62 79.0
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 8.0e-20 100.1 62 77.4
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 1.1e-19 99.8 62 79.0
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 1.4e-19 99.4 63 77.8
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.4e-19 99.4 63 77.8
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.4e-19 99.4 63 77.8
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 1.4e-19 99.4 62 79.0
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 1.8e-19 99.0 62 79.0
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 1.8e-19 99.0 62 77.4
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 2.3e-19 98.6 62 79.0
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 2.3e-19 98.6 62 77.4
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 3.1e-19 98.2 62 75.8
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 3.1e-19 98.2 62 75.8
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 4.0e-19 97.8 62 75.8
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 4.0e-19 97.8 63 76.2
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 5.2e-19 97.4 71 73.2
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 8.9e-19 96.7 62 79.0
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 1.2e-18 96.3 62 75.8
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 2.0e-18 95.5 62 77.4
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 2.6e-18 95.1 62 72.6
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 4.4e-18 94.4 77 67.5
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 4.4e-18 94.4 62 74.2
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 5.8e-18 94.0 62 74.2
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 1.3e-17 92.8 61 75.4
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 1.3e-17 92.8 61 75.4
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 1.7e-17 92.4 62 71.0
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 4.9e-17 90.9 80 63.8
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 1.9e-16 89.0 62 67.7
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 2.4e-16 88.6 62 66.1
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 4.1e-16 87.8 62 66.1
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 7.0e-16 87.0 62 67.7
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 2.0e-15 85.5 62 62.9
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 2.0e-15 85.5 62 62.9
Solyc01g098540.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 1.0e-14 83.2 64 75.0
SEGI_11901 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 3.0e-14 81.6 62 62.9
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 3.9e-14 81.3 62 58.1
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 3.9e-14 81.3 62 58.1
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 3.9e-14 81.3 62 58.1
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 3.9e-14 81.3 62 58.1
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 3.9e-14 81.3 62 58.1
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 3.9e-14 81.3 62 58.1
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 5.0e-14 80.9 62 59.7
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 5.0e-14 80.9 62 59.7
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 8.6e-14 80.1 62 56.5
Psat3g119360 Pisum sativum HOM05D005370 ORTHO05D006659 1.1e-13 79.7 53 73.6
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 2.5e-13 78.6 62 54.8
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 4.3e-13 77.8 62 54.8
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 1.2e-12 76.3 43 86.0
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 1.2e-12 76.3 51 70.6
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 2.8e-12 75.1 62 51.6
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 8.1e-12 73.6 41 82.9
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 8.1e-12 73.6 62 66.1
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 1.4e-11 72.8 47 72.3
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 6.8e-11 70.5 62 51.6
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 1.2e-10 69.7 46 69.6
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 1.2e-10 69.7 62 61.3
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 1.5e-10 69.3 64 56.2
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 1.3e-09 66.2 45 68.9
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 1.1e-08 63.2 62 50.0
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 1.4e-08 62.8 58 48.3
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 4.6e-07 57.8 38 81.6
AagrBONN_evm.TU.Sc2ySwM_228.5248 Anthoceros agrestis HOM05D005370 ORTHO05D006659 1.7e-06 55.8 62 38.7
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 2.3e-06 55.5 62 43.5
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 3.9e-06 54.7 43 69.8


User provided reference genes

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