Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004233g0050 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.1e-74 283.1 132 100.0
Nitab4.5_0001463g0090 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.5e-68 262.7 129 93.0
Nitab4.5_0014265g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 9.3e-66 253.4 132 90.2
Nitab4.5_0004323g0060 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.7e-64 249.2 132 87.9
Nitab4.5_0007033g0040 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.7e-64 249.2 132 87.9
Nitab4.5_0000016g0600 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.3e-64 248.8 132 87.9
Nitab4.5_0008734g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 5.6e-63 244.2 132 87.9
Nitab4.5_0000016g0620 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.2e-57 226.5 125 84.8
Nitab4.5_0011488g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.3e-56 222.2 125 83.2
Nitab4.5_0001463g0100 Nicotiana tabacum HOM05D007636 ORTHO05D003796 5.8e-52 207.6 129 76.7
Nitab4.5_0000016g0520 Nicotiana tabacum HOM05D007636 ORTHO05D003796 3.0e-48 195.3 132 74.2
Nitab4.5_0008055g0030 Nicotiana tabacum HOM05D007636 ORTHO05D003796 4.0e-45 184.9 129 69.8
Nitab4.5_0012115g0020 Nicotiana tabacum HOM05D007636 ORTHO05D003796 7.6e-44 180.6 135 65.9
Nitab4.5_0006771g0030 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.5e-39 165.6 134 65.7
Nitab4.5_0002723g0030 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.2e-38 162.5 134 62.7
PGSC0003DMG400031146 Solanum tuberosum HOM05D007636 ORTHO05D003796 5.3e-37 157.9 129 58.9
CAN.G358.103 Capsicum annuum HOM05D007636 ORTHO05D003796 5.9e-36 154.5 133 60.9
PGSC0003DMG400025062 Solanum tuberosum HOM05D007636 ORTHO05D003796 1.7e-35 152.9 132 58.3
PGSC0003DMG400031147 Solanum tuberosum HOM05D007636 ORTHO05D003796 3.8e-35 151.8 130 57.7
PGSC0003DMG400025061 Solanum tuberosum HOM05D007636 ORTHO05D003796 6.5e-35 151.0 131 60.3
PGSC0003DMG400025060 Solanum tuberosum HOM05D007636 ORTHO05D003796 1.4e-34 149.8 129 58.1
Sopen04g028280 Solanum pennellii HOM05D007636 ORTHO05D003796 2.7e-33 145.6 130 56.9
Sopen04g028020 Solanum pennellii HOM05D007636 ORTHO05D003796 3.6e-33 145.2 130 56.9
Solyc01g021730.2 Solanum lycopersicum HOM05D007636 ORTHO05D003796 6.1e-33 144.4 132 55.3
Sopen01g016580 Solanum pennellii HOM05D007636 ORTHO05D003796 6.1e-33 144.4 132 55.3
Sopen04g028210 Solanum pennellii HOM05D007636 ORTHO05D003796 1.8e-32 142.9 132 56.1
Nitab4.5_0005616g0040 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.3e-32 142.5 69 91.3
Sopen04g028190 Solanum pennellii HOM05D007636 ORTHO05D003796 1.5e-31 139.8 130 55.4
Peaxi162Scf00688g00041 Petunia axillaris HOM05D007636 ORTHO05D003796 7.4e-31 137.5 133 58.6
Peaxi162Scf00688g00314 Petunia axillaris HOM05D007636 ORTHO05D003796 7.4e-31 137.5 133 58.6
Nitab4.5_0001463g0070 Nicotiana tabacum HOM05D007636 ORTHO05D003796 9.7e-31 137.1 132 57.6
Peaxi162Scf00811g00013 Petunia axillaris HOM05D007636 ORTHO05D003796 4.8e-30 134.8 133 58.6
Peaxi162Scf00811g00023 Petunia axillaris HOM05D007636 ORTHO05D003796 4.8e-30 134.8 133 58.6
Peaxi162Scf02167g00001 Petunia axillaris HOM05D007636 ORTHO05D003796 4.8e-30 134.8 133 58.6
Peaxi162Scf68101g00002 Petunia axillaris HOM05D007636 ORTHO05D003796 6.3e-30 134.4 133 57.9
CAN.G895.29 Capsicum annuum HOM05D007636 ORTHO05D003796 4.5e-28 128.3 132 51.5
Nitab4.5_0009572g0010 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.9e-27 125.6 115 53.9
CAN.G895.31 Capsicum annuum HOM05D007636 ORTHO05D003796 3.6e-25 118.6 133 51.1
Peaxi162Scf00269g00151 Petunia axillaris HOM05D007636 ORTHO05D003796 3.7e-22 108.6 134 47.8
CAN.G1453.5 Capsicum annuum HOM05D007636 ORTHO05D003796 1.4e-21 106.7 124 51.6
Nitab4.5_0008734g0020 Nicotiana tabacum HOM05D007636 ORTHO05D003796 1.8e-21 106.3 83 68.7
PGSC0003DMG400040167 Solanum tuberosum HOM05D007636 ORTHO05D017739 1.2e-20 103.6 134 47.0
Solyc08g028850.1 Solanum lycopersicum HOM05D007636 ORTHO05D003796 7.7e-20 100.9 82 61.0
CAN.G1574.1 Capsicum annuum HOM05D007636 ORTHO05D003796 1.0e-19 100.5 129 46.5
CAN.G308.28 Capsicum annuum HOM05D007636 ORTHO05D017739 3.8e-19 98.6 147 43.5
Sopen11g011520 Solanum pennellii HOM05D007636 ORTHO05D003796 5.0e-19 98.2 131 42.7
Solyc11g022480.1 Solanum lycopersicum HOM05D007636 ORTHO05D003796 3.2e-18 95.5 126 42.1
CAN.G298.56 Capsicum annuum HOM05D007636 ORTHO05D017739 4.2e-18 95.1 147 43.5
CAN.G1453.2 Capsicum annuum HOM05D007636 ORTHO05D003796 7.2e-18 94.4 133 42.9
Solyc06g063380.1 Solanum lycopersicum HOM05D007636 ORTHO05D017739 6.1e-17 91.3 131 42.0
Nitab4.5_0000016g0480 Nicotiana tabacum HOM05D007636 ORTHO05D003796 8.0e-17 90.9 128 43.0
Sopen06g022850 Solanum pennellii HOM05D007636 ORTHO05D017739 1.0e-16 90.5 131 42.0
Nitab4.5_0003273g0030 Nicotiana tabacum HOM05D007636 ORTHO05D003796 5.2e-16 88.2 57 78.9
CAN.G1453.7 Capsicum annuum HOM05D007636 ORTHO05D003796 1.5e-15 86.7 87 54.0
Nitab4.5_0001463g0110 Nicotiana tabacum HOM05D007636 ORTHO05D003796 2.0e-15 86.3 39 92.3
Sopen11g011600 Solanum pennellii HOM05D007636 ORTHO05D003796 1.3e-14 83.6 126 36.5
CAN.G1574.3 Capsicum annuum HOM05D007636 ORTHO05D003796 4.1e-13 78.6 133 36.8
Thecc.10G133400 Theobroma cacao HOM05D002630 ORTHO05D000952 6.5e-11 71.2 114 39.5
FAN01G3145 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.5e-10 70.1 133 35.3
Thecc.10G132400 Theobroma cacao HOM05D002630 ORTHO05D000952 1.9e-10 69.7 116 37.9
FAN03G2513 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.2e-10 68.9 125 35.2
RcHm_v2.0_Chr7g0231191 Rosa chinensis HOM05D002630 ORTHO05D000952 7.2e-10 67.8 132 32.6
FvH4_7g11470 Fragaria vesca HOM05D002630 ORTHO05D000952 1.2e-09 67.0 125 35.2
FAN06G2160 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.2e-09 67.0 125 35.2
FAN06G5033 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.2e-09 67.0 125 35.2
FAN11G3586 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.2e-09 67.0 135 33.3
RcHm_v2.0_Chr7g0211251 Rosa chinensis HOM05D002630 ORTHO05D000952 1.2e-09 67.0 132 33.3
Thecc.10G134900 Theobroma cacao HOM05D002630 ORTHO05D000952 1.6e-09 66.6 109 38.5
Peaxi162Scf00027g00162 Petunia axillaris HOM05D010426 ORTHO05D003796 2.7e-09 65.9 129 35.7
FAN25G2891 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.6e-09 65.5 137 34.3
Peaxi162Scf01327g00121 Petunia axillaris HOM05D003646 ORTHO05D004503 3.6e-09 65.5 129 32.6
Actinidia00474 Actinidia chinensis HOM05D007636 ORTHO05D000952 4.7e-09 65.1 119 41.2
COL.COLO4_18802 Corchorus olitorius HOM05D002630 ORTHO05D000952 4.7e-09 65.1 118 34.7
FvH4_3g18930 Fragaria vesca HOM05D002630 ORTHO05D000952 4.7e-09 65.1 132 32.6
FAN11G3152 Fragaria x ananassa HOM05D002630 ORTHO05D000952 4.7e-09 65.1 132 32.6
FAN21G2732 Fragaria x ananassa HOM05D002630 ORTHO05D000952 4.7e-09 65.1 135 31.9
FAN21G0085 Fragaria x ananassa HOM05D002630 ORTHO05D000952 6.1e-09 64.7 135 32.6
Peaxi162Scf00692g00052 Petunia axillaris HOM05D010426 ORTHO05D003796 6.1e-09 64.7 129 32.6
FAN04G1225 Fragaria x ananassa HOM05D002630 ORTHO05D000952 8.0e-09 64.3 132 32.6
FAN21G1107 Fragaria x ananassa HOM05D002630 ORTHO05D000952 8.0e-09 64.3 132 34.1
FAN18G2012 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.0e-08 63.9 132 32.6
FAN18G3393 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.0e-08 63.9 132 32.6
FAN25G2554 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.0e-08 63.9 135 31.1
FvH4_3g25560 Fragaria vesca HOM05D002630 ORTHO05D000952 1.4e-08 63.5 135 31.1
FvH4_5g25360 Fragaria vesca HOM05D002630 ORTHO05D000952 1.4e-08 63.5 132 32.6
FAN16G2543 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.4e-08 63.5 137 32.1
COL.COLO4_33115 Corchorus olitorius HOM05D002630 ORTHO05D000952 1.8e-08 63.2 131 34.4
Actinidia18621 Actinidia chinensis HOM05D007636 ORTHO05D000952 2.3e-08 62.8 120 39.2
FvH4_5g25510 Fragaria vesca HOM05D002630 ORTHO05D000952 3.0e-08 62.4 132 31.8
FAN02G4413 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.0e-08 62.4 132 32.6
FAN18G3807 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.0e-08 62.4 132 31.8
FAN21G0380 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.0e-08 62.4 132 32.6
Peaxi162Scf00244g00076 Petunia axillaris HOM05D008050 ORTHO05D003796 3.0e-08 62.4 126 34.9
RcHm_v2.0_Chr6g0271921 Rosa chinensis HOM05D002630 ORTHO05D000952 3.0e-08 62.4 105 38.1
Actinidia18619 Actinidia chinensis HOM05D002630 ORTHO05D000952 4.0e-08 62.0 120 39.2
FvH4_3g18460 Fragaria vesca HOM05D002630 ORTHO05D000952 4.0e-08 62.0 132 32.6
FAN11G1828 Fragaria x ananassa HOM05D002630 ORTHO05D000952 4.0e-08 62.0 132 32.6
FAN16G0446 Fragaria x ananassa HOM05D002630 ORTHO05D000952 4.0e-08 62.0 132 32.6
FvH4_6g39190 Fragaria vesca HOM05D002630 ORTHO05D000952 5.2e-08 61.6 132 32.6
FvH4_6g39200 Fragaria vesca HOM05D002630 ORTHO05D000952 5.2e-08 61.6 132 32.6
FAN05G0057 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.2e-08 61.6 132 32.6
FAN05G2844 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.2e-08 61.6 132 32.6
FAN14G2281 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.2e-08 61.6 132 32.6
FAN14G5590 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.2e-08 61.6 132 32.6
CAN.G641.1 Capsicum annuum HOM05D008149 ORTHO05D010130 6.7e-08 61.2 109 35.8
CAN.G641.16 Capsicum annuum HOM05D008149 ORTHO05D010130 6.7e-08 61.2 109 35.8
FAN02G1492 Fragaria x ananassa HOM05D002630 ORTHO05D000952 6.7e-08 61.2 132 32.6
SGA_v2.0_scaffold15G07271 Striga asiatica HOM05D007636 ORTHO05D003796 8.8e-08 60.8 125 34.4
FvH4_6g39580 Fragaria vesca HOM05D002630 ORTHO05D000952 1.2e-07 60.5 132 32.6
FAN08G3500 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.2e-07 60.5 132 32.6
FAN14G3453 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.2e-07 60.5 132 32.6
FAN25G3033 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.2e-07 60.5 132 32.6
SGA_v2.0_scaffold25G10851 Striga asiatica HOM05D007636 ORTHO05D003796 1.2e-07 60.5 123 34.1
SGA_v2.0_scaffold25G10881 Striga asiatica HOM05D007636 ORTHO05D003796 1.2e-07 60.5 123 34.1
FAN09G4772 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.5e-07 60.1 132 31.8
Dinv05036 Davidia involucrata HOM05D002630 ORTHO05D000952 2.0e-07 59.7 123 35.0
FAN09G2675 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.0e-07 59.7 117 35.0
Lj5P158T23 Lonicera japonica HOM05D014435 ORTHO05D000952 2.0e-07 59.7 115 36.5
FvH4_6g26310 Fragaria vesca HOM05D002630 ORTHO05D000952 2.6e-07 59.3 125 29.6
FvH4_6g39600 Fragaria vesca HOM05D002630 ORTHO05D000952 2.6e-07 59.3 132 32.6
FAN02G0323 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.6e-07 59.3 125 29.6
FAN05G5746 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.6e-07 59.3 125 29.6
FAN09G0542 Fragaria x ananassa HOM05D002630 ORTHO05D000952 2.6e-07 59.3 125 29.6
FvH4_3g18170 Fragaria vesca HOM05D002630 ORTHO05D000952 3.3e-07 58.9 123 33.3
FAN14G5613 Fragaria x ananassa HOM05D002630 ORTHO05D000952 3.3e-07 58.9 132 32.6
PGSC0003DMG400008147 Solanum tuberosum HOM05D008149 ORTHO05D010130 3.3e-07 58.9 110 32.7
Atru.chr1.1696 Acer truncatum HOM05D002630 ORTHO05D000952 5.7e-07 58.2 117 34.2
FvH4_3g18940 Fragaria vesca HOM05D002630 ORTHO05D000952 5.7e-07 58.2 132 31.8
FAN11G3018 Fragaria x ananassa HOM05D002630 ORTHO05D000952 5.7e-07 58.2 132 31.8
CAN.G672.9 Capsicum annuum HOM05D007636 ORTHO05D003796 7.5e-07 57.8 64 48.4
Peaxi162Scf00016g00168 Petunia axillaris HOM05D008149 ORTHO05D010130 7.5e-07 57.8 126 30.2
Cfa010188 Carpinus fangiana HOM05D002630 ORTHO05D000952 9.7e-07 57.4 107 35.5
FAN21G3107 Fragaria x ananassa HOM05D002630 ORTHO05D000952 9.7e-07 57.4 131 32.1
PGSC0003DMG400008179 Solanum tuberosum HOM05D008149 ORTHO05D010130 9.7e-07 57.4 114 33.3
Haze_23576 Corylus avellana HOM05D002630 ORTHO05D000952 1.3e-06 57.0 107 35.5
FAN05G2222 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.3e-06 57.0 132 31.8
FAN08G1554 Fragaria x ananassa HOM05D002630 ORTHO05D000952 1.3e-06 57.0 132 31.1
Lj8P728T8 Lonicera japonica HOM05D014435 ORTHO05D000952 1.7e-06 56.6 122 32.8
PGSC0003DMG400043518 Solanum tuberosum HOM05D007636 ORTHO05D003796 1.7e-06 56.6 93 36.6
MD15G1393000 Malus domestica HOM05D002630 ORTHO05D000952 2.2e-06 56.2 103 35.9
PGSC0003DMG400035123 Solanum tuberosum HOM05D007636 ORTHO05D003796 2.8e-06 55.8 124 28.2
CAN.G641.11 Capsicum annuum HOM05D008149 ORTHO05D010130 3.7e-06 55.5 91 37.4
FvH4_5g30540 Fragaria vesca HOM05D010397 ORTHO05D025418 3.7e-06 55.5 84 41.7
Lj5g0002813 Lotus japonicus HOM05D002630 ORTHO05D000952 3.7e-06 55.5 110 34.5
Peaxi162Scf00106g00206 Petunia axillaris HOM05D008050 ORTHO05D003796 3.7e-06 55.5 126 34.1
Prupe.4G151900 Prunus persica HOM05D002630 ORTHO05D000952 3.7e-06 55.5 114 28.9
Solyc10g079220.2 Solanum lycopersicum HOM05D008149 ORTHO05D010130 3.7e-06 55.5 111 32.4
Sopen10g022760 Solanum pennellii HOM05D000002 ORTHO05D000001 4.8e-06 55.1 107 30.8
Peaxi162Scf00111g00145 Petunia axillaris HOM05D008050 ORTHO05D003796 6.3e-06 54.7 98 40.8
Peaxi162Scf00245g00112 Petunia axillaris HOM05D017006 ORTHO05D010130 6.3e-06 54.7 114 30.7
Thecc.10G139400 Theobroma cacao HOM05D002630 ORTHO05D000952 6.3e-06 54.7 124 30.6
Lj8P727T20 Lonicera japonica HOM05D014435 ORTHO05D000952 8.2e-06 54.3 127 31.5
Peaxi162Scf01007g00022 Petunia axillaris HOM05D009491 ORTHO05D003796 8.2e-06 54.3 126 33.3
Peaxi162Scf01007g00024 Petunia axillaris HOM05D009491 ORTHO05D003796 8.2e-06 54.3 126 33.3
Peaxi162Scf01007g00110 Petunia axillaris HOM05D009491 ORTHO05D003796 8.2e-06 54.3 126 33.3
Peaxi162Scf01007g00210 Petunia axillaris HOM05D009491 ORTHO05D003796 8.2e-06 54.3 126 33.3
PGSC0003DMG400008178 Solanum tuberosum HOM05D008149 ORTHO05D010130 8.2e-06 54.3 110 30.9


User provided reference genes

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