Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004205g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 2.6e-112 408.7 201 100.0
Nitab4.5_0001315g0030 Nicotiana tabacum HOM05D005658 ORTHO05D006989 2.2e-106 389.0 200 95.5
Solyc03g120540.3 Solanum lycopersicum HOM05D005658 ORTHO05D006989 5.5e-102 374.4 197 92.4
CAN.G438.34 Capsicum annuum HOM05D005658 ORTHO05D006989 4.6e-101 371.3 197 90.9
PGSC0003DMG400002629 Solanum tuberosum HOM05D005658 ORTHO05D006989 2.3e-100 369.0 197 90.4
Sopen03g039400 Solanum pennellii HOM05D005658 ORTHO05D006989 3.2e-94 348.6 184 92.9
MSTRG.9467 Avicennia marina HOM05D005658 ORTHO05D006989 4.8e-90 334.7 194 84.0
Cc04_g02920 Coffea canephora HOM05D005658 ORTHO05D006989 3.4e-88 328.6 195 81.5
SGA_v2.0_scaffold68G22977 Striga asiatica HOM05D005658 ORTHO05D006989 8.5e-87 323.9 197 79.7
SalBow7G0412 Salvia bowleyana HOM05D005658 ORTHO05D006989 9.4e-86 320.5 194 79.9
Migut.D01014 Erythranthe guttata HOM05D005658 ORTHO05D006989 2.7e-85 318.9 189 81.0
TAR383G0711 Trochodendron aralioides HOM05D005658 ORTHO05D006989 8.8e-84 313.9 190 78.4
Lalb_Chr04g0262841 Lupinus albus HOM05D005658 ORTHO05D006989 1.4e-81 306.6 189 78.3
arahy.Tifrunner.gnm1.ann1.5XEL3K Arachis hypogaea HOM05D005658 ORTHO05D006989 2.4e-81 305.8 186 79.6
Lj5g0010105 Lotus japonicus HOM05D005658 ORTHO05D006989 3.1e-81 305.4 189 80.4
Nn3g18122 Nelumbo nucifera HOM05D005658 ORTHO05D006989 3.1e-81 305.4 190 76.3
Glyma.07G018600 Glycine max HOM05D005658 ORTHO05D006989 7.0e-81 304.3 188 78.2
TPR.G38603 Trifolium pratense HOM05D005658 ORTHO05D006989 2.0e-80 302.8 189 77.2
ECA234G0336 Erigeron canadensis HOM05D005658 ORTHO05D006989 4.5e-80 301.6 197 76.1
Manes.04G130900 Manihot esculenta HOM05D005658 ORTHO05D006989 1.0e-79 300.4 192 75.5
Lj5g0006747 Lotus japonicus HOM05D005658 ORTHO05D006989 1.7e-79 299.7 186 80.1
Actinidia08995 Actinidia chinensis HOM05D005658 ORTHO05D006989 2.2e-79 299.3 197 74.1
Psat5g078360 Pisum sativum HOM05D005658 ORTHO05D006989 2.2e-79 299.3 189 77.8
Migut.D01013 Erythranthe guttata HOM05D005658 ORTHO05D006989 2.5e-78 295.8 177 80.8
CiPaw.01G234800 Carya illinoinensis HOM05D005658 ORTHO05D006989 3.2e-78 295.4 190 76.8
Nitab4.5_0001968g0140 Nicotiana tabacum HOM05D005658 ORTHO05D006989 7.2e-78 294.3 199 77.9
Phvul.010G147700 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 7.2e-78 294.3 187 77.0
Potri.003G051700 Populus trichocarpa HOM05D005658 ORTHO05D006989 7.2e-78 294.3 190 75.8
HanXRQChr10g0313501 Helianthus annuus HOM05D005658 ORTHO05D006989 9.4e-78 293.9 188 76.6
unitig_746.g26661 Utricularia gibba HOM05D005658 ORTHO05D006989 1.2e-77 293.5 187 74.9
PGR102G0856 Punica granatum HOM05D005658 ORTHO05D006989 2.1e-77 292.7 191 77.0
Duzib235G1329 Durio zibethinus HOM05D005658 ORTHO05D006989 2.7e-77 292.4 190 74.7
Thecc.06G094500 Theobroma cacao HOM05D005658 ORTHO05D006989 2.7e-77 292.4 190 72.6
VMungo0331G1814 Vigna mungo HOM05D005658 ORTHO05D006989 3.6e-77 292.0 185 77.8
Glyma.08G203800 Glycine max HOM05D005658 ORTHO05D006989 6.1e-77 291.2 189 75.1
Oeu029646.1 Olea europaea HOM05D005658 ORTHO05D006989 6.1e-77 291.2 168 82.7
Prupe.3G064800 Prunus persica HOM05D005658 ORTHO05D006989 8.0e-77 290.8 190 73.7
RcHm_v2.0_Chr2g0139251 Rosa chinensis HOM05D005658 ORTHO05D006989 1.8e-76 289.7 191 71.7
CSS0031663 Camellia sinensis var. sinensis HOM05D005658 ORTHO05D006989 6.7e-76 287.7 196 73.0
CANSAT56G4082 Cannabis sativa HOM05D005658 ORTHO05D006989 6.7e-76 287.7 189 75.7
SalBow7G1899 Salvia bowleyana HOM05D005658 ORTHO05D006989 6.7e-76 287.7 190 73.7
Eucgr.J02954 Eucalyptus grandis HOM05D005658 ORTHO05D006989 8.8e-76 287.3 190 73.7
Haze_16346 Corylus avellana HOM05D005658 ORTHO05D006989 1.5e-75 286.6 188 74.5
CANSAT56G2118 Cannabis sativa HOM05D005658 ORTHO05D006989 2.6e-75 285.8 189 74.1
FAN14G0081 Fragaria x ananassa HOM05D005658 ORTHO05D006989 2.6e-75 285.8 189 73.0
MBI04_g04855_MAGBIO Magnolia biondii HOM05D005658 ORTHO05D006989 3.3e-75 285.4 185 75.7
MD09G1208600 Malus domestica HOM05D005658 ORTHO05D006989 3.3e-75 285.4 189 72.5
Psat7g255000 Pisum sativum HOM05D005658 ORTHO05D006989 7.5e-75 284.3 188 73.9
DCAR_016205 Daucus carota HOM05D005658 ORTHO05D006989 9.7e-75 283.9 193 74.6
CDE08G1506 Ceratophyllum demersum HOM05D005658 ORTHO05D006989 1.3e-74 283.5 187 71.7
Thhalv10021560m.g Eutrema salsugineum HOM05D005658 ORTHO05D006989 1.7e-74 283.1 190 73.7
PSO210G2136 Papaver somniferum HOM05D005658 ORTHO05D006989 1.7e-74 283.1 194 70.1
GSVIVG01017054001 Vitis vinifera HOM05D005658 ORTHO05D006989 1.7e-74 283.1 186 76.3
Aqoxy7G01547 Aquilegia oxysepala HOM05D005658 ORTHO05D006989 2.8e-74 282.3 190 72.1
Gohir.D03G062533 Gossypium hirsutum HOM05D005658 ORTHO05D006989 3.7e-74 282.0 190 72.6
EL10Ac9g22053 Beta vulgaris HOM05D005658 ORTHO05D006989 4.8e-74 281.6 190 72.1
Gohir.A02G119700 Gossypium hirsutum HOM05D005658 ORTHO05D006989 4.8e-74 281.6 190 72.6
CARHR091380 Cardamine hirsuta HOM05D005658 ORTHO05D006989 1.8e-73 279.6 190 73.2
FvH4_6g31890 Fragaria vesca HOM05D005658 ORTHO05D006989 2.4e-73 279.3 189 72.5
ATR0736G109 Amborella trichopoda HOM05D005658 ORTHO05D006989 3.1e-73 278.9 189 69.8
FAN02G2498 Fragaria x ananassa HOM05D005658 ORTHO05D006989 4.1e-73 278.5 189 71.4
THA.LOC104817977 Tarenaya hassleriana HOM05D005658 ORTHO05D006989 5.3e-73 278.1 189 70.4
AT3G16190 Arabidopsis thaliana HOM05D005658 ORTHO05D006989 7.0e-73 277.7 192 71.9
Gorai.003G064300 Gossypium raimondii HOM05D005658 ORTHO05D006989 1.2e-72 276.9 190 72.1
GSVIVG01017053001 Vitis vinifera HOM05D005658 ORTHO05D006989 1.2e-72 276.9 186 70.4
AL3G28880 Arabidopsis lyrata HOM05D005658 ORTHO05D006989 2.0e-72 276.2 192 69.8
PSO210G3060 Papaver somniferum HOM05D005658 ORTHO05D006989 2.0e-72 276.2 189 70.9
Cfa002103 Carpinus fangiana HOM05D005658 ORTHO05D006989 2.7e-72 275.8 187 72.2
RcHm_v2.0_Chr2g0139241 Rosa chinensis HOM05D005658 ORTHO05D006989 5.9e-72 274.6 189 70.9
SEGI_12338 Sequoiadendron giganteum HOM05D005658 ORTHO05D006989 7.7e-72 274.2 186 69.9
VMungo0331G0597 Vigna mungo HOM05D005658 ORTHO05D006989 7.7e-72 274.2 189 70.4
Peaxi162Scf00015g00132 Petunia axillaris HOM05D005658 ORTHO05D006989 1.0e-71 273.9 195 71.8
Lj9A509T93 Lonicera japonica HOM05D005658 ORTHO05D006989 5.0e-71 271.6 167 80.8
Sp3g14560 Schrenkiella parvula HOM05D005658 ORTHO05D006989 5.0e-71 271.6 192 70.3
SGA_v2.0_scaffold4G02011 Striga asiatica HOM05D005658 ORTHO05D006989 8.5e-71 270.8 170 74.7
arahy.Tifrunner.gnm1.ann1.JS39C6 Arachis hypogaea HOM05D005658 ORTHO05D006989 1.5e-70 270.0 186 73.1
Ciclev10026541m.g Citrus clementina HOM05D005658 ORTHO05D006989 1.5e-70 270.0 190 69.5
Phvul.010G147800 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 1.5e-70 270.0 189 69.3
Dinv38010 Davidia involucrata HOM05D005658 ORTHO05D006989 1.9e-70 269.6 170 76.5
PSO421G0294 Papaver somniferum HOM05D005658 ORTHO05D006989 2.5e-70 269.2 186 69.9
HPP92_003927 Vanilla planifolia HOM05D005658 ORTHO05D006989 3.2e-70 268.9 193 67.9
arahy.Tifrunner.gnm1.ann1.17ZCGM Arachis hypogaea HOM05D005658 ORTHO05D006989 9.4e-70 267.3 169 78.1
Lsat_1_v5_gn_5_131001 Lactuca sativa HOM05D000012 ORTHO05D000804 1.2e-69 266.9 168 76.8
vmacro16973 Vaccinium macrocarpon HOM05D005658 ORTHO05D006989 2.1e-69 266.2 183 72.7
QL05p021437 Quercus lobata HOM05D005658 ORTHO05D006989 2.7e-69 265.8 167 80.2
BcaC09g48588 Brassica carinata HOM05D005658 ORTHO05D006989 4.7e-69 265.0 190 67.9
Os02g0276400 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 4.7e-69 265.0 195 69.2
Medtr4g011330 Medicago truncatula HOM05D005658 ORTHO05D006989 8.0e-69 264.2 167 75.4
Sc12g0009500 Simmondsia chinensis HOM05D005658 ORTHO05D006989 1.0e-68 263.8 177 72.3
Ca_20421_v3 Cicer arietinum L. HOM05D005658 ORTHO05D006989 1.4e-68 263.5 167 77.8
COL.COLO4_30455 Corchorus olitorius HOM05D005658 ORTHO05D006989 2.3e-68 262.7 187 69.5
A05p33310 Brassica napus HOM05D005658 ORTHO05D006989 5.2e-68 261.5 191 68.1
C05p50310 Brassica napus HOM05D005658 ORTHO05D006989 4.4e-67 258.5 191 67.0
Sabra03G0027300 Salix brachista HOM05D005658 ORTHO05D006989 1.3e-66 256.9 167 76.6
BraA05t22156Z Brassica rapa HOM05D005658 ORTHO05D006989 3.7e-66 255.4 199 65.8
CsaV3_7G033450 Cucumis sativus L. HOM05D005658 ORTHO05D006989 6.3e-66 254.6 187 66.3
PSO063G2380 Papaver somniferum HOM05D005658 ORTHO05D006989 1.4e-65 253.4 186 65.6
Rhsim12G0201100 Rhododendron simsii HOM05D005658 ORTHO05D006989 1.4e-65 253.4 175 70.9
Sed0000814 Sechium edule HOM05D005658 ORTHO05D006989 1.8e-65 253.1 185 66.5
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 2.4e-65 252.7 201 64.2
ClCG09G001890 Citrullus lanatus HOM05D005658 ORTHO05D006989 4.5e-64 248.4 190 64.7
FAN05G4480 Fragaria x ananassa HOM05D005658 ORTHO05D006989 4.5e-64 248.4 166 72.9
Gohir.D03G066800 Gossypium hirsutum HOM05D005658 ORTHO05D006989 4.5e-64 248.4 167 73.7
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 7.7e-64 247.7 189 67.2
Sed0023183 Sechium edule HOM05D005658 ORTHO05D006989 1.0e-63 247.3 187 62.6
AUR62011683 Chenopodium quinoa HOM05D005658 ORTHO05D006989 1.1e-62 243.8 167 71.3
Carub.0003s1594 Capsella rubella HOM05D005658 ORTHO05D006989 5.5e-62 241.5 169 71.0
Ah.01g021740 Amaranthus hybridus HOM05D005658 ORTHO05D006989 2.1e-61 239.6 166 72.3
COL.COLO4_18473 Corchorus olitorius HOM05D005658 ORTHO05D006989 4.7e-61 238.4 187 64.7
COL.COLO4_30457 Corchorus olitorius HOM05D005658 ORTHO05D006989 8.0e-61 237.7 165 71.5
MELO3C027085.2 Cucumis melo HOM05D005658 ORTHO05D006989 1.8e-60 236.5 190 63.2
Os02g0276200 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 5.2e-60 235.0 177 68.9
SMO147G0229 Selaginella moellendorffii HOM05D005658 ORTHO05D006989 2.6e-59 232.6 186 65.1
Peaxi162Scf00015g00131 Petunia axillaris HOM05D005658 ORTHO05D006989 5.7e-59 231.5 201 63.2
AUR62016508 Chenopodium quinoa HOM05D005658 ORTHO05D006989 9.8e-59 230.7 186 64.5
Mapoly0052s0007 Marchantia polymorpha HOM05D005658 ORTHO05D006989 1.3e-58 230.3 193 57.5
Nitab4.5_0003039g0010 Nicotiana tabacum HOM05D005658 ORTHO05D006989 1.7e-58 229.9 198 64.1
Psat7g255080 Pisum sativum HOM05D005658 ORTHO05D006989 3.1e-57 225.7 139 78.4
Ciclev10026617m.g Citrus clementina HOM05D005658 ORTHO05D006989 4.1e-57 225.3 166 65.1
TPR.G40810 Trifolium pratense HOM05D005658 ORTHO05D006989 9.2e-57 224.2 139 77.0
AUR62016509 Chenopodium quinoa HOM05D005658 ORTHO05D006989 4.5e-56 221.9 166 66.3
Pp3c13_4590 Physcomitrium patens HOM05D005658 ORTHO05D006989 6.6e-55 218.0 196 55.1
AagrBONN_evm.TU.Sc2ySwM_369.407 Anthoceros agrestis HOM05D002948 ORTHO05D003577 5.6e-54 214.9 187 56.1
CBR_g48432 Chara braunii HOM05D005658 ORTHO05D006989 8.9e-52 207.6 196 53.6
Psat5g078240 Pisum sativum HOM05D005658 ORTHO05D006989 1.3e-50 203.8 188 56.4
Haze_16345 Corylus avellana HOM05D003600 ORTHO05D004129 4.6e-48 195.3 119 82.4
Atru.chr1.3413 Acer truncatum HOM05D005658 ORTHO05D006989 8.6e-47 191.0 114 81.6
Cpa.g.sc1241.2 Carica papaya HOM05D005658 ORTHO05D006989 1.5e-46 190.3 130 72.3
Sed0018991 Sechium edule HOM05D005658 ORTHO05D006989 8.9e-44 181.0 130 66.2
Glyma.08G203700 Glycine max HOM05D005658 ORTHO05D006989 3.4e-43 179.1 114 77.2
Cre16.g674650 Chlamydomonas reinhardtii HOM05D005658 ORTHO05D006989 3.2e-41 172.6 189 45.5
Manes.11G037100 Manihot esculenta HOM05D005658 ORTHO05D006989 2.1e-37 159.8 176 51.7
AUR62011684 Chenopodium quinoa HOM05D005658 ORTHO05D006989 6.8e-36 154.8 114 68.4
CAN.G214.3 Capsicum annuum HOM05D005658 ORTHO05D006989 2.7e-32 142.9 117 65.0
QL02p037511 Quercus lobata HOM05D005658 ORTHO05D006989 7.3e-14 81.6 60 70.0
Sopen12g022580 Solanum pennellii HOM05D005658 ORTHO05D006989 1.2e-11 74.3 172 34.9
TPR.G1351 Trifolium pratense HOM05D005658 ORTHO05D006989 2.0e-11 73.6 54 63.0
Atru.chr1.3414 Acer truncatum HOM05D005658 ORTHO05D006989 2.6e-11 73.2 52 67.3
ATR0618G206 Amborella trichopoda HOM05D006499 ORTHO05D007874 3.4e-11 72.8 179 30.7
Prupe.1G348500 Prunus persica HOM05D006499 ORTHO05D007874 1.3e-10 70.9 169 32.0
Sp2g23920 Schrenkiella parvula HOM05D006499 ORTHO05D007874 4.9e-10 68.9 171 29.8
A02p41090 Brassica napus HOM05D006499 ORTHO05D007874 6.4e-10 68.6 171 29.8
BraA02t09053Z Brassica rapa HOM05D006499 ORTHO05D007874 6.4e-10 68.6 171 29.8
C02p60950 Brassica napus HOM05D006499 ORTHO05D007874 8.4e-10 68.2 171 28.7
BolC2t12145H Brassica oleracea HOM05D006499 ORTHO05D007874 8.4e-10 68.2 171 28.7
Lj2g0027544 Lotus japonicus HOM05D006499 ORTHO05D007874 1.1e-09 67.8 170 32.4
Zm00001eb237290 Zea mays HOM05D005658 ORTHO05D006989 1.4e-09 67.4 54 63.0
BcaC03g18032 Brassica carinata HOM05D006499 ORTHO05D007874 1.9e-09 67.0 171 28.7
Thhalv10005281m.g Eutrema salsugineum HOM05D006499 ORTHO05D007874 4.2e-09 65.9 169 29.6
BcaB07g29862 Brassica carinata HOM05D006499 ORTHO05D007874 5.4e-09 65.5 171 28.7
AL6G34450 Arabidopsis lyrata HOM05D006499 ORTHO05D007874 9.3e-09 64.7 170 29.4
Nitab4.5_0004301g0030 Nicotiana tabacum HOM05D006499 ORTHO05D007874 9.3e-09 64.7 168 29.2
Carub.0006s2100 Capsella rubella HOM05D006499 ORTHO05D007874 2.7e-08 63.2 169 32.0
Cfa026003 Carpinus fangiana HOM05D006499 ORTHO05D007874 3.5e-08 62.8 192 26.6
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 4.6e-08 62.4 173 30.6
AT5G23230 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 6.0e-08 62.0 169 28.4
MD16G1003500 Malus domestica HOM05D006499 ORTHO05D007874 6.0e-08 62.0 172 29.7
AT5G23220 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 7.9e-08 61.6 169 29.0
Ca_29435_v3 Cicer arietinum L. HOM05D006499 ORTHO05D007874 7.9e-08 61.6 170 32.4
Ciclev10032745m.g Citrus clementina HOM05D006499 ORTHO05D007874 1.0e-07 61.2 170 31.2
CARHR190310 Cardamine hirsuta HOM05D006499 ORTHO05D007874 1.8e-07 60.5 171 26.3
SMO116G0488 Selaginella moellendorffii HOM05D006499 ORTHO05D007874 1.8e-07 60.5 170 29.4
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 2.3e-07 60.1 171 26.9
Mapoly0180s0008 Marchantia polymorpha HOM05D006499 ORTHO05D007874 1.5e-06 57.4 177 26.0
MCO09G426 Micromonas commoda HOM05D006499 ORTHO05D007874 1.9e-06 57.0 180 25.6


User provided reference genes

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