Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004204g0010 Nicotiana tabacum HOM05D004305 ORTHO05D005159 1.2e-220 769.6 425 100.0
Nitab4.5_0000076g0140 Nicotiana tabacum HOM05D004305 ORTHO05D005159 1.4e-200 703.0 427 91.8
PGSC0003DMG400021011 Solanum tuberosum HOM05D004305 ORTHO05D005159 4.0e-110 402.5 453 61.8
Peaxi162Scf00395g00054 Petunia axillaris HOM05D004305 ORTHO05D005159 1.0e-105 387.9 465 59.1
Solyc02g022920.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 2.0e-93 347.1 461 55.5
Sopen02g006550 Solanum pennellii HOM05D004305 ORTHO05D005159 1.6e-79 300.8 419 55.8
Oeu041117.1 Olea europaea HOM05D004305 ORTHO05D005159 1.8e-38 164.5 467 33.0
Cc09_g07570 Coffea canephora HOM05D004305 ORTHO05D005159 4.1e-38 163.3 466 34.3
PGSC0003DMG400021114 Solanum tuberosum HOM05D004305 ORTHO05D005159 3.9e-33 146.7 417 35.7
Sopen02g019200 Solanum pennellii HOM05D004305 ORTHO05D005159 3.3e-32 143.7 410 35.1
Solyc02g070040.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 4.8e-31 139.8 407 34.2
Oeu060316.1 Olea europaea HOM05D004305 ORTHO05D005159 6.3e-31 139.4 482 31.5
MSTRG.7546 Avicennia marina HOM05D004305 ORTHO05D005159 1.8e-30 137.9 488 31.1
Oeu040075.1 Olea europaea HOM05D004305 ORTHO05D005159 3.4e-29 133.7 337 35.3
MSTRG.16299 Avicennia marina HOM05D004305 ORTHO05D005159 1.4e-27 128.3 482 30.7
Lj1P1160T59 Lonicera japonica HOM05D004305 ORTHO05D005159 1.2e-26 125.2 482 30.7
Oeu015165.2 Olea europaea HOM05D004305 ORTHO05D005159 1.6e-26 124.8 462 31.4
Migut.M01906 Erythranthe guttata HOM05D004305 ORTHO05D005159 2.1e-26 124.4 467 31.5
Lsat_1_v5_gn_9_25860 Lactuca sativa HOM05D004305 ORTHO05D005159 2.2e-23 114.4 438 29.9
CSS0026993 Camellia sinensis var. sinensis HOM05D004305 ORTHO05D005159 1.8e-22 111.3 503 30.6
Nitab4.5_0001583g0210 Nicotiana tabacum HOM05D004305 ORTHO05D005159 2.4e-22 110.9 252 39.3
Ciclev10015182m.g Citrus clementina HOM05D004305 ORTHO05D005159 1.0e-20 105.5 456 29.2
CANSAT35G0942 Cannabis sativa HOM05D004305 ORTHO05D005159 1.1e-19 102.1 474 29.5
Potri.001G464300 Populus trichocarpa HOM05D004305 ORTHO05D005159 1.9e-19 101.3 461 31.5
GSVIVG01021709001 Vitis vinifera HOM05D004305 ORTHO05D005159 3.2e-19 100.5 450 29.8
RcHm_v2.0_Chr5g0017411 Rosa chinensis HOM05D004305 ORTHO05D005159 4.2e-19 100.1 464 30.2
HanXRQChr08g0237311 Helianthus annuus HOM05D004305 ORTHO05D005159 5.5e-19 99.8 451 29.5
Lalb_Chr07g0189031 Lupinus albus HOM05D004305 ORTHO05D005159 2.1e-18 97.8 468 31.0
SGA_v2.0_scaffold1G00275 Striga asiatica HOM05D004305 ORTHO05D005159 2.1e-18 97.8 446 28.9
Lj4g0027556 Lotus japonicus HOM05D004305 ORTHO05D005159 2.7e-18 97.4 464 31.0
DCAR_003840 Daucus carota HOM05D004305 ORTHO05D005159 3.6e-18 97.1 424 29.0
Sabra16G0313900 Salix brachista HOM05D004305 ORTHO05D005159 1.0e-17 95.5 477 29.8
Dinv06927 Davidia involucrata HOM05D004305 ORTHO05D005159 1.4e-17 95.1 371 31.3
MD05G1269300 Malus domestica HOM05D004305 ORTHO05D005159 1.4e-17 95.1 504 30.8
FAN16G1832 Fragaria x ananassa HOM05D004305 ORTHO05D005159 5.2e-17 93.2 483 30.8
Sabra16G0315300 Salix brachista HOM05D004305 ORTHO05D005159 5.2e-17 93.2 477 30.0
Atru.chr10.781 Acer truncatum HOM05D004305 ORTHO05D005159 8.8e-17 92.4 445 32.4
Cpa.g.c43226 Carica papaya HOM05D004305 ORTHO05D005159 8.8e-17 92.4 455 29.5
TWI15G0126 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 2.0e-16 91.3 427 29.3
FvH4_3g10700 Fragaria vesca HOM05D004305 ORTHO05D005159 2.6e-16 90.9 462 30.3
Sabra11G0141400 Salix brachista HOM05D004305 ORTHO05D005159 7.4e-16 89.4 465 29.0
Lalb_Chr18g0058121 Lupinus albus HOM05D004305 ORTHO05D005159 9.7e-16 89.0 444 31.5
Thecc.06G003200 Theobroma cacao HOM05D004305 ORTHO05D005159 2.8e-15 87.4 428 29.4
VMungo0540G0062 Vigna mungo HOM05D004305 ORTHO05D005159 3.7e-15 87.0 404 33.7
SGA_v2.0_scaffold223G42870 Striga asiatica HOM05D004305 ORTHO05D005159 1.4e-14 85.1 432 28.5
Glyma.15G132400 Glycine max HOM05D004305 ORTHO05D005159 1.8e-14 84.7 417 30.9
Rhsim02G0163100 Rhododendron simsii HOM05D004305 ORTHO05D005159 2.4e-14 84.3 507 27.4
FAN11G3528 Fragaria x ananassa HOM05D004305 ORTHO05D005159 3.1e-14 84.0 451 29.9
FAN21G2878 Fragaria x ananassa HOM05D004305 ORTHO05D005159 3.1e-14 84.0 437 30.0
unitig_748.g8282 Utricularia gibba HOM05D004305 ORTHO05D005159 3.1e-14 84.0 393 26.7
Glyma.09G026200 Glycine max HOM05D004305 ORTHO05D005159 1.6e-13 81.6 434 32.7
Nn1g03508 Nelumbo nucifera HOM05D004305 ORTHO05D005159 1.6e-13 81.6 462 25.5
Lj6g0010125 Lotus japonicus HOM05D004305 ORTHO05D005159 2.0e-13 81.3 412 32.8
Prupe.4G095400 Prunus persica HOM05D004305 ORTHO05D005159 2.0e-13 81.3 521 26.5
Duzib192G0088 Durio zibethinus HOM05D004305 ORTHO05D005159 2.6e-13 80.9 409 29.1
Cfa000806 Carpinus fangiana HOM05D004305 ORTHO05D005159 3.5e-13 80.5 457 26.0
TWI38G0672 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 4.5e-13 80.1 439 32.1
QL05p063597 Quercus lobata HOM05D004305 ORTHO05D005159 1.3e-12 78.6 447 27.3
QL93p0201_0023 Quercus lobata HOM05D004305 ORTHO05D005159 1.3e-12 78.6 447 27.3
MELO3C002832.2 Cucumis melo HOM05D004305 ORTHO05D005159 3.8e-12 77.0 455 28.1
Duzib235G0167 Durio zibethinus HOM05D004305 ORTHO05D005159 3.8e-12 77.0 412 27.2
ClCG03G008260 Citrullus lanatus HOM05D004305 ORTHO05D005159 6.5e-12 76.3 461 27.1
Carub.0007s2055 Capsella rubella HOM05D004305 ORTHO05D005159 8.5e-12 75.9 444 31.3
Sc03g0008520 Simmondsia chinensis HOM05D004305 ORTHO05D005159 8.5e-12 75.9 199 35.2
unitig_748.g7348 Utricularia gibba HOM05D004305 ORTHO05D005159 8.5e-12 75.9 280 29.6
Manes.14G124700 Manihot esculenta HOM05D004305 ORTHO05D005159 1.5e-11 75.1 476 27.5
FAN25G2552 Fragaria x ananassa HOM05D004305 ORTHO05D005159 1.9e-11 74.7 463 28.3
MBI02_g39880_MAGBIO Magnolia biondii HOM05D004305 ORTHO05D005159 2.5e-11 74.3 177 35.6
MD10G1248100 Malus domestica HOM05D004305 ORTHO05D005159 2.5e-11 74.3 511 25.2
unitig_32.g10874 Utricularia gibba HOM05D004305 ORTHO05D005159 2.5e-11 74.3 413 27.6
AT4G20880 Arabidopsis thaliana HOM05D004305 ORTHO05D005159 4.2e-11 73.6 430 28.4
BolC7t45599H Brassica oleracea HOM05D004305 ORTHO05D005159 4.2e-11 73.6 428 28.3
ECA247G2099 Erigeron canadensis HOM05D004305 ORTHO05D005159 4.2e-11 73.6 431 27.4
BcaNung04140 Brassica carinata HOM05D004305 ORTHO05D005159 5.5e-11 73.2 431 28.5
Potri.011G162400 Populus trichocarpa HOM05D004305 ORTHO05D005159 7.2e-11 72.8 485 26.8
PSO675G0053 Papaver somniferum HOM05D004305 ORTHO05D005159 1.2e-10 72.0 474 27.8
BcaNung05413 Brassica carinata HOM05D004305 ORTHO05D005159 2.1e-10 71.2 426 28.4
Eucgr.D00100 Eucalyptus grandis HOM05D004305 ORTHO05D005159 2.1e-10 71.2 499 27.5
Phvul.006G126000 Phaseolus vulgaris HOM05D004305 ORTHO05D005159 2.1e-10 71.2 402 30.8
Medtr2g031350 Medicago truncatula HOM05D004305 ORTHO05D005159 2.7e-10 70.9 434 31.6
BraA03t14328Z Brassica rapa HOM05D004305 ORTHO05D005159 3.6e-10 70.5 432 29.2
Psat1g165840 Pisum sativum HOM05D004305 ORTHO05D005159 4.7e-10 70.1 422 27.0
A03p52530 Brassica napus HOM05D004305 ORTHO05D005159 6.1e-10 69.7 444 29.7
Actinidia31373 Actinidia chinensis HOM05D004305 ORTHO05D005159 8.0e-10 69.3 192 39.6
Actinidia13459 Actinidia chinensis HOM05D004305 ORTHO05D005159 2.3e-09 67.8 356 29.2
Aa31LG6G2950 Aethionema arabicum HOM05D004305 ORTHO05D005159 2.3e-09 67.8 461 26.0
Ca_00869_v3 Cicer arietinum L. HOM05D004305 ORTHO05D005159 2.3e-09 67.8 459 28.1
CsaV3_1G037140 Cucumis sativus L. HOM05D004305 ORTHO05D005159 6.8e-09 66.2 467 27.6
AL7G33270 Arabidopsis lyrata HOM05D004305 ORTHO05D005159 8.8e-09 65.9 441 27.7
C07p50970 Brassica napus HOM05D004305 ORTHO05D005159 1.5e-08 65.1 428 28.3
Haze_05867 Corylus avellana HOM05D004305 ORTHO05D005159 1.5e-08 65.1 466 25.3
BcaNung07356 Brassica carinata HOM05D004305 ORTHO05D005159 2.0e-08 64.7 428 27.8
BcaB03g11678 Brassica carinata HOM05D004305 ORTHO05D005159 4.4e-08 63.5 431 27.1
COL.COLO4_26846 Corchorus olitorius HOM05D004305 ORTHO05D005159 7.5e-08 62.8 257 28.0
unitig_32.g11679 Utricularia gibba HOM05D004305 ORTHO05D005159 7.5e-08 62.8 138 39.9
A01p12300 Brassica napus HOM05D004305 ORTHO05D005159 3.7e-07 60.5 433 26.3
Manes.06G058700 Manihot esculenta HOM05D004305 ORTHO05D005159 4.8e-07 60.1 486 25.5
BraA01t01174Z Brassica rapa HOM05D004305 ORTHO05D005159 8.3e-07 59.3 432 26.2
EL10Ac4g07786 Beta vulgaris HOM05D023924 ORTHO05D023401 1.8e-06 58.2 224 30.4
THA.LOC104806249 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 1.8e-06 58.2 432 29.6
Psat7g094000 Pisum sativum HOM05D004305 ORTHO05D005159 2.4e-06 57.8 432 25.7
Nn1g07139 Nelumbo nucifera HOM05D004305 ORTHO05D005159 3.1e-06 57.4 62 56.5
Gorai.010G144500 Gossypium raimondii HOM05D004305 ORTHO05D005159 5.3e-06 56.6 406 25.1
PGR083G0011 Punica granatum HOM05D004305 ORTHO05D005159 7.0e-06 56.2 192 32.8


User provided reference genes

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