Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004200g0060 Nicotiana tabacum HOM05D005454 ORTHO05D006781 2.8e-67 258.5 129 100.0
Nitab4.5_0006630g0030 Nicotiana tabacum HOM05D005454 ORTHO05D006781 1.1e-66 256.5 129 99.2
Peaxi162Scf00286g00452 Petunia axillaris HOM05D005454 ORTHO05D006781 6.5e-64 247.3 128 94.5
PGSC0003DMG400011901 Solanum tuberosum HOM05D005454 ORTHO05D006781 1.8e-61 239.2 128 90.6
Solyc09g098140.4 Solanum lycopersicum HOM05D005454 ORTHO05D006781 1.5e-60 236.1 128 89.1
Sopen09g036090 Solanum pennellii HOM05D005454 ORTHO05D006781 1.5e-60 236.1 128 89.1
CAN.G710.29 Capsicum annuum HOM05D005454 ORTHO05D006781 2.6e-60 235.3 128 89.1
Aqoxy1G01376 Aquilegia oxysepala HOM05D005454 ORTHO05D006781 5.5e-55 217.6 128 82.0
TWI59G0830 Tripterygium wilfordii HOM05D005454 ORTHO05D006781 1.0e-53 213.4 127 79.5
GSVIVG01036708001 Vitis vinifera HOM05D005454 ORTHO05D006781 1.4e-53 213.0 128 77.3
Oeu029453.1 Olea europaea HOM05D005454 ORTHO05D006781 1.8e-53 212.6 128 78.1
Migut.M01498 Erythranthe guttata HOM05D005454 ORTHO05D006781 2.3e-53 212.2 128 81.2
Cc00_g09040 Coffea canephora HOM05D005454 ORTHO05D006781 3.0e-53 211.8 128 79.7
TWI38G1327 Tripterygium wilfordii HOM05D005454 ORTHO05D006781 3.9e-53 211.5 127 78.0
Prupe.4G126700 Prunus persica HOM05D005454 ORTHO05D006781 8.8e-53 210.3 128 78.1
CiPaw.15G112200 Carya illinoinensis HOM05D005454 ORTHO05D006781 1.5e-52 209.5 127 78.0
ClCG02G018790 Citrullus lanatus HOM05D005454 ORTHO05D006781 3.3e-52 208.4 127 78.7
MD10G1217600 Malus domestica HOM05D005454 ORTHO05D006781 3.3e-52 208.4 128 77.3
COL.COLO4_19518 Corchorus olitorius HOM05D005454 ORTHO05D006781 5.7e-52 207.6 127 77.2
TAR626G0894 Trochodendron aralioides HOM05D005454 ORTHO05D006781 5.7e-52 207.6 127 79.5
Ciclev10006210m.g Citrus clementina HOM05D005454 ORTHO05D006781 7.4e-52 207.2 127 75.6
Manes.16G045300 Manihot esculenta HOM05D005454 ORTHO05D006781 1.3e-51 206.5 127 77.2
Sabra08G0060600 Salix brachista HOM05D005454 ORTHO05D006781 1.7e-51 206.1 127 77.2
Eucgr.F04477 Eucalyptus grandis HOM05D005454 ORTHO05D006781 1.1e-50 203.4 130 76.2
Atru.chr1.44 Acer truncatum HOM05D005454 ORTHO05D006781 1.4e-50 203.0 127 75.6
Thecc.02G245200 Theobroma cacao HOM05D005454 ORTHO05D006781 1.8e-50 202.6 130 76.2
Duzib251G0225 Durio zibethinus HOM05D005454 ORTHO05D006781 3.1e-50 201.8 130 74.6
Gohir.A02G014000 Gossypium hirsutum HOM05D005454 ORTHO05D006781 3.1e-50 201.8 123 79.7
THA.LOC104812391 Tarenaya hassleriana HOM05D005454 ORTHO05D006781 4.1e-50 201.4 121 77.7
vmacro09764 Vaccinium macrocarpon HOM05D005454 ORTHO05D006781 4.1e-50 201.4 127 74.8
Gorai.002G165600 Gossypium raimondii HOM05D005454 ORTHO05D006781 5.3e-50 201.1 123 79.7
QL04p094645 Quercus lobata HOM05D005454 ORTHO05D006781 5.3e-50 201.1 127 76.4
QL04p094846 Quercus lobata HOM05D005454 ORTHO05D006781 5.3e-50 201.1 127 76.4
Nn7g38402 Nelumbo nucifera HOM05D005454 ORTHO05D006781 7.0e-50 200.7 127 74.0
Potri.008G081400 Populus trichocarpa HOM05D005454 ORTHO05D006781 7.0e-50 200.7 126 75.4
SalBow8G4406 Salvia bowleyana HOM05D005454 ORTHO05D006781 7.0e-50 200.7 128 75.8
SGA_v2.0_scaffold186G40175 Striga asiatica HOM05D005454 ORTHO05D006781 7.0e-50 200.7 124 77.4
Gohir.D01G133900 Gossypium hirsutum HOM05D005454 ORTHO05D006781 1.2e-49 199.9 127 75.6
Actinidia00854 Actinidia chinensis HOM05D005454 ORTHO05D006781 1.6e-49 199.5 128 75.0
Cpa.g.sc32.137 Carica papaya HOM05D005454 ORTHO05D006781 1.6e-49 199.5 121 77.7
SalBow8G5040 Salvia bowleyana HOM05D005454 ORTHO05D006781 2.6e-49 198.7 128 75.0
CANSAT56G0738 Cannabis sativa HOM05D005454 ORTHO05D006781 3.5e-49 198.4 119 78.2
CANSAT56G1199 Cannabis sativa HOM05D005454 ORTHO05D006781 3.5e-49 198.4 119 78.2
Sed0024280 Sechium edule HOM05D005454 ORTHO05D006781 4.5e-49 198.0 136 71.3
CsaV3_6G013400 Cucumis sativus L. HOM05D005454 ORTHO05D006781 7.7e-49 197.2 127 74.8
BraA07t31955Z Brassica rapa HOM05D005454 ORTHO05D006781 1.0e-48 196.8 126 75.4
Duzib248G0167 Durio zibethinus HOM05D005454 ORTHO05D006781 1.7e-48 196.1 127 76.4
THA.LOC104808143 Tarenaya hassleriana HOM05D005454 ORTHO05D006781 1.7e-48 196.1 121 75.2
CiPaw.15G112600 Carya illinoinensis HOM05D005454 ORTHO05D006781 2.9e-48 195.3 149 66.4
Lsat_1_v5_gn_5_184081 Lactuca sativa HOM05D005454 ORTHO05D006781 2.9e-48 195.3 115 79.1
BcaB02g07212 Brassica carinata HOM05D005454 ORTHO05D006781 3.8e-48 194.9 126 74.6
BcaC08g47498 Brassica carinata HOM05D005454 ORTHO05D006781 5.0e-48 194.5 126 74.6
A07p27170 Brassica napus HOM05D005454 ORTHO05D006781 5.0e-48 194.5 126 73.8
C06p53270 Brassica napus HOM05D005454 ORTHO05D006781 5.0e-48 194.5 126 74.6
BolC6t40345H Brassica oleracea HOM05D005454 ORTHO05D006781 5.0e-48 194.5 126 74.6
BcaC08g45360 Brassica carinata HOM05D005454 ORTHO05D006781 6.5e-48 194.1 126 73.8
C06p29920 Brassica napus HOM05D005454 ORTHO05D006781 6.5e-48 194.1 126 73.8
BraA07t30361Z Brassica rapa HOM05D005454 ORTHO05D006781 6.5e-48 194.1 126 73.8
RcHm_v2.0_Chr5g0023201 Rosa chinensis HOM05D005454 ORTHO05D006781 1.1e-47 193.4 128 77.3
BolC6t38153H Brassica oleracea HOM05D005454 ORTHO05D006781 1.9e-47 192.6 126 73.8
unitig_32.g11075 Utricularia gibba HOM05D005454 ORTHO05D006781 1.9e-47 192.6 114 79.8
Thhalv10019255m.g Eutrema salsugineum HOM05D005454 ORTHO05D006781 3.2e-47 191.8 128 71.9
FvH4_3g13970 Fragaria vesca HOM05D005454 ORTHO05D006781 3.2e-47 191.8 128 77.3
FAN11G3450 Fragaria x ananassa HOM05D005454 ORTHO05D006781 3.2e-47 191.8 128 77.3
FAN16G0850 Fragaria x ananassa HOM05D005454 ORTHO05D006781 4.2e-47 191.4 128 76.6
FAN21G1174 Fragaria x ananassa HOM05D005454 ORTHO05D006781 4.2e-47 191.4 128 76.6
HanXRQChr13g0408901 Helianthus annuus HOM05D005454 ORTHO05D006781 4.2e-47 191.4 121 75.2
HanXRQChr13g0408931 Helianthus annuus HOM05D005454 ORTHO05D006781 4.2e-47 191.4 121 75.2
Aa31LG4G1640 Aethionema arabicum HOM05D005454 ORTHO05D006781 7.2e-47 190.7 126 70.6
PSO675G7587 Papaver somniferum HOM05D005454 ORTHO05D006781 7.2e-47 190.7 118 76.3
Rhsim04G0003500 Rhododendron simsii HOM05D005454 ORTHO05D006781 7.2e-47 190.7 143 66.4
PGR102G3369 Punica granatum HOM05D005454 ORTHO05D006781 2.1e-46 189.1 127 72.4
AT1G79390 Arabidopsis thaliana HOM05D005454 ORTHO05D006781 2.7e-46 188.7 126 70.6
Lj3g0001328 Lotus japonicus HOM05D005454 ORTHO05D006781 6.1e-46 187.6 117 75.2
MSTRG.16083 Avicennia marina HOM05D005454 ORTHO05D006781 1.4e-45 186.4 117 76.1
AL2G40000 Arabidopsis lyrata HOM05D005454 ORTHO05D006781 1.8e-45 186.0 123 71.5
Medtr8g447300 Medicago truncatula HOM05D005454 ORTHO05D006781 1.8e-45 186.0 113 75.2
Lalb_Chr03g0031911 Lupinus albus HOM05D005454 ORTHO05D006781 2.3e-45 185.7 118 72.9
Carub.0002s2625 Capsella rubella HOM05D005454 ORTHO05D006781 3.0e-45 185.3 126 69.8
CiPaw.15G112400 Carya illinoinensis HOM05D005454 ORTHO05D006781 6.7e-45 184.1 141 66.0
Glyma.11G026500 Glycine max HOM05D005454 ORTHO05D006781 6.7e-45 184.1 117 74.4
MD05G1239400 Malus domestica HOM05D005454 ORTHO05D006781 6.7e-45 184.1 118 73.7
FAN25G3791 Fragaria x ananassa HOM05D005454 ORTHO05D006781 8.8e-45 183.7 127 74.0
Os02g0495900 Oryza sativa ssp. japonica HOM05D005454 ORTHO05D006781 8.8e-45 183.7 128 71.1
ECA240G0828 Erigeron canadensis HOM05D005454 ORTHO05D006781 1.2e-44 183.3 128 69.5
Sc18g0003140 Simmondsia chinensis HOM05D005454 ORTHO05D006781 1.2e-44 183.3 119 73.9
Ca_26272_v3 Cicer arietinum L. HOM05D005454 ORTHO05D006781 1.5e-44 183.0 114 75.4
Sabra10G0134500 Salix brachista HOM05D005454 ORTHO05D006781 1.5e-44 183.0 127 71.7
Glyma.01G216400 Glycine max HOM05D005454 ORTHO05D006781 2.6e-44 182.2 117 73.5
Zm00001eb241290 Zea mays HOM05D005454 ORTHO05D006781 3.3e-44 181.8 125 72.0
Hund10936 Selenicereus undatus HOM05D005454 ORTHO05D006781 4.4e-44 181.4 125 71.2
TPR.G8202 Trifolium pratense HOM05D005454 ORTHO05D006781 5.7e-44 181.0 116 75.9
ATR0820G041 Amborella trichopoda HOM05D005454 ORTHO05D006781 1.3e-43 179.9 118 72.9
Dinv42456 Davidia involucrata HOM05D005454 ORTHO05D006781 1.7e-43 179.5 118 73.7
MBI13_g09219_MAGBIO Magnolia biondii HOM05D005454 ORTHO05D006781 2.2e-43 179.1 123 73.2
Ah.02g115510 Amaranthus hybridus HOM05D005454 ORTHO05D006781 2.8e-43 178.7 125 69.6
Phvul.002G154100 Phaseolus vulgaris HOM05D005454 ORTHO05D006781 4.8e-43 177.9 117 70.1
VMungo1215G2509 Vigna mungo HOM05D005454 ORTHO05D006781 4.8e-43 177.9 117 71.8
MELO3C019617.2 Cucumis melo HOM05D005454 ORTHO05D006781 1.8e-42 176.0 147 61.9
Psat4g141200 Pisum sativum HOM05D005454 ORTHO05D006781 2.4e-42 175.6 113 73.5
arahy.Tifrunner.gnm1.ann1.DLUG3E Arachis hypogaea HOM05D005454 ORTHO05D006781 4.1e-42 174.9 122 70.5
EL10Ac5g12502 Beta vulgaris HOM05D005454 ORTHO05D006781 7.0e-42 174.1 125 68.8
arahy.Tifrunner.gnm1.ann1.TLTS2V Arachis hypogaea HOM05D005454 ORTHO05D006781 9.1e-42 173.7 125 68.8
AUR62030518 Chenopodium quinoa HOM05D005454 ORTHO05D006781 2.2e-40 169.1 127 66.9
AUR62030774 Chenopodium quinoa HOM05D005454 ORTHO05D006781 2.9e-40 168.7 127 66.1
SEGI_00588 Sequoiadendron giganteum HOM05D005454 ORTHO05D006781 6.1e-38 161.0 129 62.8
CDE02G1314 Ceratophyllum demersum HOM05D000236 ORTHO05D000192 2.6e-28 129.0 88 73.9
Pp3c27_5100 Physcomitrium patens HOM05D005454 ORTHO05D006781 3.7e-27 125.2 112 54.5
Sp5g34440 Schrenkiella parvula HOM05D005454 ORTHO05D006781 4.9e-27 124.8 83 73.5
AagrBONN_evm.TU.Sc2ySwM_117.1988 Anthoceros agrestis HOM05D005454 ORTHO05D006781 1.0e-24 117.1 112 50.9
Gohir.A03G171875 Gossypium hirsutum HOM05D005454 ORTHO05D006781 1.7e-24 116.3 73 71.2
Mapoly0011s0156 Marchantia polymorpha HOM05D005454 ORTHO05D006781 2.3e-24 115.9 112 51.8
Haze_01788 Corylus avellana HOM05D005454 ORTHO05D006781 1.5e-23 113.2 72 66.7
HPP92_015989 Vanilla planifolia HOM05D005454 ORTHO05D006781 2.5e-23 112.5 73 69.9
Haze_08480 Corylus avellana HOM05D005454 ORTHO05D006781 3.3e-23 112.1 68 72.1
Cfa017755 Carpinus fangiana HOM05D005454 ORTHO05D006781 4.3e-23 111.7 68 70.6
Haze_18487 Corylus avellana HOM05D005454 ORTHO05D006781 5.6e-23 111.3 67 71.6
Hma1.2p1_0151F.1_g066990 Hydrangea macrophylla HOM05D005454 ORTHO05D006781 9.5e-23 110.5 68 70.6
CSS0036802 Camellia sinensis var. sinensis HOM05D005454 ORTHO05D006781 2.1e-22 109.4 67 73.1
A07p44460 Brassica napus HOM05D005454 ORTHO05D006781 3.6e-22 108.6 68 72.1
Nn7g38396 Nelumbo nucifera HOM05D005454 ORTHO05D006781 1.4e-21 106.7 77 61.0
CBR_g2846 Chara braunii HOM05D005454 ORTHO05D006781 4.1e-18 95.1 114 43.0
Cfa017757 Carpinus fangiana HOM05D005454 ORTHO05D006781 9.2e-18 94.0 59 79.7
CARHR073050 Cardamine hirsuta HOM05D005454 ORTHO05D006781 2.0e-17 92.8 57 80.7
CDE04G2596 Ceratophyllum demersum HOM05D005454 ORTHO05D006781 7.8e-17 90.9 71 60.6
QL04p094659 Quercus lobata HOM05D005454 ORTHO05D006781 1.0e-16 90.5 60 78.3
Atru.chr1.31 Acer truncatum HOM05D005454 ORTHO05D006781 1.3e-16 90.1 81 60.5
BolC8t48807H Brassica oleracea HOM05D005454 ORTHO05D006781 2.3e-16 89.4 59 72.9
Potri.010G174700 Populus trichocarpa HOM05D005454 ORTHO05D006781 2.3e-16 89.4 59 76.3
Actinidia03633 Actinidia chinensis HOM05D005454 ORTHO05D012925 3.0e-16 89.0 63 73.0
CARHR073040 Cardamine hirsuta HOM05D005454 ORTHO05D006781 3.9e-16 88.6 58 65.5
Gohir.A04G138000 Gossypium hirsutum HOM05D005454 ORTHO05D006781 2.3e-13 79.3 57 66.7
C06p00690 Brassica napus HOM05D005454 ORTHO05D006781 5.2e-13 78.2 53 71.7
BolC6t35206H Brassica oleracea HOM05D005454 ORTHO05D006781 5.2e-13 78.2 53 71.7
Cc00_g28770 Coffea canephora HOM05D001769 ORTHO05D001695 5.2e-13 78.2 93 47.3
DCAR_013713 Daucus carota HOM05D005454 ORTHO05D006781 6.8e-13 77.8 119 41.2
BcaC08g42854 Brassica carinata HOM05D005454 ORTHO05D006781 8.9e-13 77.4 46 78.3
C03p71170 Brassica napus HOM05D005454 ORTHO05D006781 8.9e-13 77.4 53 71.7
SMO367G0923 Selaginella moellendorffii HOM05D005454 ORTHO05D006781 3.4e-12 75.5 121 36.4
RcHm_v2.0_Chr5g0023191 Rosa chinensis HOM05D005454 ORTHO05D006781 7.5e-12 74.3 69 56.5
SGA_v2.0_scaffold29G12256 Striga asiatica HOM05D005454 ORTHO05D006781 1.1e-07 60.5 44 61.4


User provided reference genes

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