Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004197g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.2e-58 229.6 115 100.0
Nitab4.5_0026131g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 9.3e-54 213.4 115 93.0
Nitab4.5_0002907g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.6e-42 174.9 115 76.5
Nitab4.5_0002544g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 9.3e-38 160.2 115 72.2
Nitab4.5_0000167g0330 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.7e-37 158.7 115 71.3
Nitab4.5_0000970g0060 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.0e-37 157.5 115 69.6
Nitab4.5_0011018g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.5e-35 152.1 115 68.7
Nitab4.5_0014949g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.6e-35 151.0 89 85.4
Nitab4.5_0000928g0130 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.1e-33 145.2 115 67.8
Nitab4.5_0002175g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 7.6e-32 140.6 115 66.1
Nitab4.5_0008258g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.4e-30 136.3 99 68.7
Nitab4.5_0001878g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.3e-27 125.2 87 73.6
Nitab4.5_0015899g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.3e-27 125.2 95 67.4
Nitab4.5_0000187g0280 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.2e-26 120.6 87 73.6
Nitab4.5_0009530g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.5e-24 116.3 98 61.2
Nitab4.5_0001070g0070 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.6e-24 115.5 85 70.6
CAN.G1537.11 Capsicum annuum HOM05D002441 ORTHO05D002376 1.7e-23 112.8 113 54.0
CAN.G1212.9 Capsicum annuum HOM05D002441 ORTHO05D002376 1.9e-22 109.4 113 51.3
CAN.G1349.13 Capsicum annuum HOM05D000586 ORTHO05D007435 2.5e-22 109.0 112 52.7
Nitab4.5_0003787g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.3e-20 103.2 102 53.9
Nitab4.5_0004100g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.8e-20 102.8 112 50.0
Peaxi162Scf00602g00313 Petunia axillaris HOM05D002441 ORTHO05D002376 8.7e-20 100.5 112 44.6
CAN.G505.25 Capsicum annuum HOM05D002441 ORTHO05D002376 1.9e-19 99.4 113 50.4
Nitab4.5_0000448g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.9e-19 99.4 100 52.0
Nitab4.5_0002025g0040 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.5e-19 99.0 104 52.9
Nitab4.5_0026419g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.5e-19 99.0 112 47.3
Nitab4.5_0000020g0400 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.3e-19 98.6 113 43.4
Nitab4.5_0000216g0290 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.3e-19 98.2 71 69.0
Peaxi162Scf00103g00815 Petunia axillaris HOM05D002441 ORTHO05D002376 1.6e-18 96.3 103 45.6
Peaxi162Scf00261g00059 Petunia axillaris HOM05D002441 ORTHO05D002376 2.8e-18 95.5 112 42.0
Nitab4.5_0007040g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.8e-18 94.7 112 46.4
Peaxi162Scf00347g00918 Petunia axillaris HOM05D002441 ORTHO05D002376 4.8e-18 94.7 103 44.7
Peaxi162Scf00429g00624 Petunia axillaris HOM05D002441 ORTHO05D002376 4.8e-18 94.7 104 46.2
Nitab4.5_0003378g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.3e-18 94.4 100 52.0
Nitab4.5_0000992g0110 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.2e-18 94.0 112 45.5
Peaxi162Scf00706g00120 Petunia axillaris HOM05D002441 ORTHO05D002376 1.1e-17 93.6 103 44.7
Nitab4.5_0007294g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.9e-17 90.9 88 51.1
Nitab4.5_0003964g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 9.0e-17 90.5 100 49.0
Nitab4.5_0005864g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 9.0e-17 90.5 102 46.1
Nitab4.5_0001818g0070 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.2e-16 90.1 102 46.1
Peaxi162Scf11584g00003 Petunia axillaris HOM05D002441 ORTHO05D002376 1.2e-16 90.1 112 41.1
Peaxi162Scf00010g01319 Petunia axillaris HOM05D002441 ORTHO05D002376 3.4e-16 88.6 98 44.9
Nitab4.5_0005910g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 7.7e-16 87.4 95 48.4
CAN.G411.8 Capsicum annuum HOM05D002441 ORTHO05D002376 1.0e-15 87.0 88 48.9
Peaxi162Scf00385g00619 Petunia axillaris HOM05D002441 ORTHO05D002376 1.0e-15 87.0 96 44.8
Nitab4.5_0002735g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.2e-15 85.9 87 51.7
Nitab4.5_0004405g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.9e-15 85.5 113 37.2
CAN.G321.48 Capsicum annuum HOM05D001267 ORTHO05D002376 3.8e-15 85.1 103 45.6
PGSC0003DMG400010936 Solanum tuberosum HOM05D002441 ORTHO05D002376 6.5e-15 84.3 112 39.3
PGSC0003DMG400040698 Solanum tuberosum HOM05D002441 ORTHO05D002376 6.5e-15 84.3 105 41.9
CAN.G125.10 Capsicum annuum HOM05D000010 ORTHO05D002376 8.5e-15 84.0 115 41.7
CAN.G206.110 Capsicum annuum HOM05D002441 ORTHO05D002376 8.5e-15 84.0 88 46.6
Nitab4.5_0004863g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 8.5e-15 84.0 113 36.3
Peaxi162Scf00832g00024 Petunia axillaris HOM05D002441 ORTHO05D002376 1.1e-14 83.6 124 37.9
CAN.G651.11 Capsicum annuum HOM05D002441 ORTHO05D002376 1.4e-14 83.2 88 45.5
Peaxi162Scf00774g00217 Petunia axillaris HOM05D002441 ORTHO05D002376 1.9e-14 82.8 124 36.3
PGSC0003DMG400010868 Solanum tuberosum HOM05D002441 ORTHO05D002376 2.5e-14 82.4 102 41.2
Nitab4.5_0010449g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 3.2e-14 82.0 87 47.1
CAN.G358.51 Capsicum annuum HOM05D002441 ORTHO05D002376 7.2e-14 80.9 103 45.6
CAN.G849.8 Capsicum annuum HOM05D002441 ORTHO05D002376 7.2e-14 80.9 104 40.4
CAN.G681.71 Capsicum annuum HOM05D002441 ORTHO05D002376 3.6e-13 78.6 81 50.6
Nitab4.5_0026297g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.1e-13 77.8 94 47.9
Peaxi162Scf00221g01114 Petunia axillaris HOM05D002441 ORTHO05D002376 7.9e-13 77.4 81 44.4
PGSC0003DMG400007030 Solanum tuberosum HOM05D002441 ORTHO05D002513 1.0e-12 77.0 114 38.6
Nitab4.5_0002391g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.4e-12 76.6 79 49.4
Nitab4.5_0008207g0040 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.4e-12 76.6 85 48.2
arahy.Tifrunner.gnm1.ann1.8R9H6F Arachis hypogaea HOM05D002441 ORTHO05D002376 2.3e-12 75.9 108 38.9
arahy.Tifrunner.gnm1.ann1.PUQ8PF Arachis hypogaea HOM05D002441 ORTHO05D002376 2.3e-12 75.9 108 38.9
Peaxi162Scf00006g02913 Petunia axillaris HOM05D002441 ORTHO05D002376 2.3e-12 75.9 112 34.8
Peaxi162Scf00588g00038 Petunia axillaris HOM05D002441 ORTHO05D002376 2.3e-12 75.9 112 34.8
CAN.G1305.28 Capsicum annuum HOM05D002441 ORTHO05D002376 3.9e-12 75.1 88 44.3
Nitab4.5_0002702g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.1e-12 74.7 104 38.5
Peaxi162Scf00204g00617 Petunia axillaris HOM05D002441 ORTHO05D002376 8.8e-12 73.9 81 42.0
Nitab4.5_0009190g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.5e-11 73.2 94 44.7
CAN.G426.17 Capsicum annuum HOM05D002441 ORTHO05D002376 3.3e-11 72.0 88 40.9
Peaxi162Scf00070g00086 Petunia axillaris HOM05D002441 ORTHO05D002376 4.3e-11 71.6 71 45.1
Nitab4.5_0003263g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 7.4e-11 70.9 112 39.3
Nitab4.5_0007533g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.7e-11 70.5 69 55.1
Nitab4.5_0000070g0310 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.7e-10 69.7 71 43.7
Nitab4.5_0003355g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.7e-10 69.7 100 41.0
CAN.G694.34 Capsicum annuum HOM05D002441 ORTHO05D002376 3.7e-10 68.6 113 38.1
CAN.G1359.4 Capsicum annuum HOM05D002441 ORTHO05D002376 6.3e-10 67.8 73 42.5
CAN.G309.75 Capsicum annuum HOM05D000096 ORTHO05D012655 8.2e-10 67.4 58 55.2
arahy.Tifrunner.gnm1.ann1.D8EMDP Arachis hypogaea HOM05D002441 ORTHO05D002376 2.4e-09 65.9 102 34.3
arahy.Tifrunner.gnm1.ann1.9DML6S Arachis hypogaea HOM05D002441 ORTHO05D002376 3.1e-09 65.5 107 37.4
arahy.Tifrunner.gnm1.ann1.D5SYT8 Arachis hypogaea HOM05D002441 ORTHO05D002376 4.1e-09 65.1 103 34.0
CAN.G193.15 Capsicum annuum HOM05D002441 ORTHO05D002376 5.3e-09 64.7 82 39.0
arahy.Tifrunner.gnm1.ann1.DBF1B4 Arachis hypogaea HOM05D002441 ORTHO05D002376 6.9e-09 64.3 96 38.5
arahy.Tifrunner.gnm1.ann1.U0JAJ0 Arachis hypogaea HOM05D002441 ORTHO05D002376 6.9e-09 64.3 96 38.5
Nitab4.5_0013831g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.9e-09 64.3 71 40.8
arahy.Tifrunner.gnm1.ann1.BDM5B3 Arachis hypogaea HOM05D002441 ORTHO05D002376 9.1e-09 63.9 96 38.5
arahy.Tifrunner.gnm1.ann1.11NDG0 Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-08 63.2 103 33.0
arahy.Tifrunner.gnm1.ann1.40UDPE Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-08 63.2 103 33.0
arahy.Tifrunner.gnm1.ann1.AFNT1S Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-08 63.2 103 33.0
arahy.Tifrunner.gnm1.ann1.FKF8NN Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-08 63.2 103 33.0
arahy.Tifrunner.gnm1.ann1.G1FX5D Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-08 63.2 103 33.0
arahy.Tifrunner.gnm1.ann1.G9S7AV Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-08 63.2 103 33.0
arahy.Tifrunner.gnm1.ann1.HTKL5C Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-08 63.2 103 33.0
arahy.Tifrunner.gnm1.ann1.I5QAZJ Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-08 63.2 103 33.0
arahy.Tifrunner.gnm1.ann1.IQTA4G Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-08 63.2 103 33.0
arahy.Tifrunner.gnm1.ann1.PWRV1I Arachis hypogaea HOM05D002441 ORTHO05D002376 1.5e-08 63.2 103 33.0
EL10Ac7g16273 Beta vulgaris HOM05D000353 ORTHO05D000174 2.6e-08 62.4 98 34.7
Ah.08g210030 Amaranthus hybridus HOM05D002441 ORTHO05D002376 3.4e-08 62.0 103 37.9
CAN.G1139.20 Capsicum annuum HOM05D002441 ORTHO05D002376 3.4e-08 62.0 93 38.7
arahy.Tifrunner.gnm1.ann1.Y0MAT2 Arachis hypogaea HOM05D002441 ORTHO05D002376 5.9e-08 61.2 93 36.6
Nitab4.5_0007645g0040 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.9e-08 61.2 115 37.4
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 7.7e-08 60.8 87 37.9
arahy.Tifrunner.gnm1.ann1.8J8DAZ Arachis hypogaea HOM05D002441 ORTHO05D002376 1.3e-07 60.1 93 36.6
CAN.G628.5 Capsicum annuum HOM05D002441 ORTHO05D002376 1.7e-07 59.7 113 34.5
Nitab4.5_0000935g0160 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.7e-07 59.7 69 39.1
Nitab4.5_0000365g0120 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.2e-07 59.3 74 47.3
Nitab4.5_0000681g0200 Nicotiana tabacum HOM05D002441 ORTHO05D002376 2.2e-07 59.3 56 51.8
arahy.Tifrunner.gnm1.ann1.18WZIV Arachis hypogaea HOM05D002441 ORTHO05D002376 2.9e-07 58.9 114 33.3
Lj1g0002106 Lotus japonicus HOM05D024106 ORTHO05D002376 5.0e-07 58.2 112 31.2
Lj3g0027323 Lotus japonicus HOM05D024106 ORTHO05D002376 6.5e-07 57.8 112 30.4
SGA_v2.0_scaffold21G09448 Striga asiatica HOM05D000353 ORTHO05D000174 6.5e-07 57.8 97 37.1
CAN.G556.7 Capsicum annuum HOM05D000096 ORTHO05D000045 8.5e-07 57.4 57 49.1
Peaxi162Scf00156g00109 Petunia axillaris HOM05D002441 ORTHO05D002376 8.5e-07 57.4 67 37.3
Nitab4.5_0010353g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.4e-06 56.6 104 37.5
arahy.Tifrunner.gnm1.ann1.EPMR0G Arachis hypogaea HOM05D002441 ORTHO05D002376 2.5e-06 55.8 104 30.8
CAN.G182.27 Capsicum annuum HOM05D002441 ORTHO05D002376 2.5e-06 55.8 71 43.7
HanXRQChr08g0230241 Helianthus annuus HOM05D003964 ORTHO05D000174 3.2e-06 55.5 86 34.9
arahy.Tifrunner.gnm1.ann1.A988JE Arachis hypogaea HOM05D002441 ORTHO05D002376 5.5e-06 54.7 91 34.1
arahy.Tifrunner.gnm1.ann1.BSJS1T Arachis hypogaea HOM05D002441 ORTHO05D002376 7.2e-06 54.3 95 31.6
arahy.Tifrunner.gnm1.ann1.FH4NXK Arachis hypogaea HOM05D002441 ORTHO05D002376 7.2e-06 54.3 96 33.3
Nitab4.5_0001960g0070 Nicotiana tabacum HOM05D002441 ORTHO05D002376 9.4e-06 53.9 70 41.4


User provided reference genes

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