Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 2.9e-45 184.9 93 100.0
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 3.3e-41 171.4 93 92.5
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 4.1e-28 127.9 96 71.9
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 2.1e-27 125.6 93 73.1
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 5.1e-26 120.9 91 73.6
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 8.6e-26 120.2 93 69.9
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 2.5e-25 118.6 91 72.5
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 8.9e-23 110.2 96 62.5
Solyc06g069350.3 Solanum lycopersicum HOM05D007643 ORTHO05D007801 7.1e-20 100.5 80 68.8
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 9.2e-20 100.1 76 65.8
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 1.6e-19 99.4 76 65.8
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 6.0e-19 97.4 89 55.1
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 3.3e-17 91.7 76 60.5
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 7.3e-17 90.5 77 61.0
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 6.2e-16 87.4 88 53.4
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 6.2e-16 87.4 79 58.2
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 5.8e-14 80.9 83 49.4
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 1.9e-12 75.9 90 44.4
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 5.4e-12 74.3 92 48.9
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 6.0e-11 70.9 90 47.8
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 1.0e-10 70.1 74 52.7
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.0e-10 70.1 77 48.1
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.0e-10 70.1 77 48.1
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.3e-10 69.7 72 50.0
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 1.7e-10 69.3 90 47.8
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 1.7e-10 69.3 73 52.1
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 3.0e-10 68.6 76 50.0
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 5.1e-10 67.8 76 50.0
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 6.6e-10 67.4 73 46.6
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 8.7e-10 67.0 88 46.6
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 8.7e-10 67.0 78 47.4
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 8.7e-10 67.0 72 48.6
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 8.7e-10 67.0 77 50.6
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 1.1e-09 66.6 62 51.6
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 1.1e-09 66.6 92 43.5
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.5e-09 66.2 77 45.5
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 1.5e-09 66.2 72 48.6
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 1.5e-09 66.2 88 45.5
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 1.9e-09 65.9 91 46.2
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 1.9e-09 65.9 88 44.3
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 2.5e-09 65.5 72 47.2
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 2.5e-09 65.5 75 46.7
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 3.3e-09 65.1 90 44.4
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 5.6e-09 64.3 77 45.5
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 7.3e-09 63.9 87 44.8
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 7.3e-09 63.9 88 44.3
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 7.3e-09 63.9 75 45.3
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 9.6e-09 63.5 72 48.6
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 1.3e-08 63.2 87 46.0
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 1.3e-08 63.2 78 47.4
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 1.6e-08 62.8 92 43.5
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 3.6e-08 61.6 92 42.4
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 3.6e-08 61.6 92 39.1
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 4.8e-08 61.2 85 41.2
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 6.2e-08 60.8 89 38.2
arahy.Tifrunner.gnm1.ann1.Z569TI Arachis hypogaea HOM05D007643 ORTHO05D007801 8.1e-08 60.5 85 44.7
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 1.4e-07 59.7 90 41.1
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 1.4e-07 59.7 90 42.2
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 1.8e-07 59.3 70 42.9
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 2.4e-07 58.9 59 47.5
Glyma.04G185600 Glycine max HOM05D007643 ORTHO05D007801 3.1e-07 58.5 78 41.0
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 4.0e-07 58.2 67 46.3
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 6.9e-07 57.4 58 41.4
FAN13G0443 Fragaria x ananassa HOM05D007643 ORTHO05D007801 6.9e-07 57.4 49 55.1
Glyma.06G180500 Glycine max HOM05D007643 ORTHO05D007801 6.9e-07 57.4 90 40.0
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 1.5e-06 56.2 58 41.4
FvH4_5g13250 Fragaria vesca HOM05D007643 ORTHO05D007801 2.0e-06 55.8 49 53.1
Phvul.009G176200 Phaseolus vulgaris HOM05D007643 ORTHO05D007801 2.0e-06 55.8 90 38.9
CDE02G0802 Ceratophyllum demersum HOM05D007643 ORTHO05D007801 2.6e-06 55.5 72 38.9
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 3.4e-06 55.1 74 40.5
Aqoxy3G03786 Aquilegia oxysepala HOM05D007643 ORTHO05D007801 4.4e-06 54.7 87 37.9
Lj1g0019261 Lotus japonicus HOM05D007643 ORTHO05D007801 7.6e-06 53.9 76 46.1
Medtr2g059060 Medicago truncatula HOM05D007643 ORTHO05D007801 9.9e-06 53.5 79 40.5


User provided reference genes

Program Settings