Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004190g0010 Nicotiana tabacum HOM05D014920 ORTHO05D009802 9.1e-71 270.4 164 100.0
Nitab4.5_0001432g0130 Nicotiana tabacum HOM05D014920 ORTHO05D009802 1.6e-51 206.5 164 82.9
PGSC0003DMG400004059 Solanum tuberosum HOM05D014920 ORTHO05D009802 3.6e-27 125.6 170 50.0
Nitab4.5_0000646g0100 Nicotiana tabacum HOM05D014920 ORTHO05D009802 1.0e-21 107.5 164 56.1
Solyc06g069340.1 Solanum lycopersicum HOM05D014920 ORTHO05D009802 3.9e-21 105.5 166 47.0
Nitab4.5_0002805g0110 Nicotiana tabacum HOM05D014920 ORTHO05D009802 7.3e-20 101.3 164 56.1
Sopen06g026600 Solanum pennellii HOM05D014920 ORTHO05D009802 1.3e-16 90.5 158 45.6
PGSC0003DMG400024516 Solanum tuberosum HOM05D014920 ORTHO05D009802 1.0e-13 80.9 162 46.9
CSS0016849 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 1.1e-12 77.4 167 43.7
CSS0048960 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 2.5e-12 76.3 167 44.9
Duzib084G1352 Durio zibethinus HOM05D008563 ORTHO05D009802 9.6e-12 74.3 170 37.6
CSS0034251 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 4.7e-11 72.0 168 42.3
CSS0042453 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 4.7e-11 72.0 168 42.3
Sopen03g033700 Solanum pennellii HOM05D014920 ORTHO05D009802 1.8e-10 70.1 169 44.4
Thecc.03G112200 Theobroma cacao HOM05D008563 ORTHO05D009802 6.9e-10 68.2 168 36.3
CAN.G982.29 Capsicum annuum HOM05D000541 ORTHO05D000137 1.2e-09 67.4 156 46.2
Sed0005169 Sechium edule HOM05D008563 ORTHO05D009802 2.0e-09 66.6 162 35.2
Sed0012187 Sechium edule HOM05D008563 ORTHO05D009802 1.7e-08 63.5 162 34.6
CiPaw.15G117600 Carya illinoinensis HOM05D008563 ORTHO05D009802 4.9e-08 62.0 167 47.9
Dinv36837 Davidia involucrata HOM05D008563 ORTHO05D009802 6.4e-08 61.6 147 55.1
COL.COLO4_28804 Corchorus olitorius HOM05D008563 ORTHO05D009802 8.4e-08 61.2 171 39.8
Nn3g17602 Nelumbo nucifera HOM05D008563 ORTHO05D009802 1.1e-07 60.8 170 47.6
Atru.chr11.1516 Acer truncatum HOM05D018013 ORTHO05D013371 1.9e-07 60.1 171 39.2
Medtr4g112870 Medicago truncatula HOM05D008563 ORTHO05D009802 3.2e-07 59.3 160 36.2
Prupe.5G211600 Prunus persica HOM05D008563 ORTHO05D009802 4.2e-07 58.9 90 53.3
Gohir.D12G187700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 7.1e-07 58.2 75 46.7
Gorai.008G201100 Gossypium raimondii HOM05D008563 ORTHO05D009802 7.1e-07 58.2 75 46.7
ClCG06G015330 Citrullus lanatus HOM05D008563 ORTHO05D009802 9.3e-07 57.8 161 47.8
Psat4g045520 Pisum sativum HOM05D008563 ORTHO05D009802 1.2e-06 57.4 154 36.4
Oeu048107.1 Olea europaea HOM05D026131 ORTHO05D009956 1.6e-06 57.0 112 36.6
Sopen05g006040 Solanum pennellii HOM05D011353 ORTHO05D009802 1.6e-06 57.0 78 47.4
QL10p021529 Quercus lobata HOM05D008563 ORTHO05D009802 2.1e-06 56.6 171 43.3
Solyc05g010270.1 Solanum lycopersicum HOM05D011353 ORTHO05D009802 2.1e-06 56.6 78 47.4
THA.LOC104819391 Tarenaya hassleriana HOM05D009919 ORTHO05D012044 2.7e-06 56.2 74 58.1
Medtr2g058870 Medicago truncatula HOM05D008563 ORTHO05D009956 3.5e-06 55.8 164 34.1
CAN.G184.15 Capsicum annuum HOM05D011353 ORTHO05D009802 4.6e-06 55.5 105 37.1
Medtr7g017790 Medicago truncatula HOM05D008889 ORTHO05D009956 7.8e-06 54.7 126 40.5
Potri.015G054900 Populus trichocarpa HOM05D008563 ORTHO05D009802 7.8e-06 54.7 167 47.9


User provided reference genes

Program Settings