Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004176g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 2.2e-282 974.9 481 100.0
Nitab4.5_0001085g0040 Nicotiana tabacum HOM05D005167 ORTHO05D006312 5.6e-262 907.1 491 93.1
CAN.G1379.23 Capsicum annuum HOM05D005167 ORTHO05D006312 5.0e-226 787.7 482 82.4
PGSC0003DMG400018222 Solanum tuberosum HOM05D005167 ORTHO05D006312 4.7e-224 781.2 486 82.1
Solyc01g102670.3 Solanum lycopersicum HOM05D005167 ORTHO05D006312 1.0e-223 780.0 483 82.2
Sopen01g045080 Solanum pennellii HOM05D005167 ORTHO05D006312 3.0e-223 778.5 483 82.0
Peaxi162Scf00194g00934 Petunia axillaris HOM05D005167 ORTHO05D006312 2.9e-218 761.9 490 79.0
Dinv24548 Davidia involucrata HOM05D000457 ORTHO05D000560 6.6e-154 548.1 506 59.1
Hma1.2p1_0052F.1_g030120 Hydrangea macrophylla HOM05D005167 ORTHO05D006312 4.0e-151 538.9 474 61.6
Lj9C241G5 Lonicera japonica HOM05D005167 ORTHO05D006312 1.6e-144 516.9 472 60.2
Oeu000168.1 Olea europaea HOM05D005167 ORTHO05D006312 9.3e-140 501.1 463 59.4
vmacro19812 Vaccinium macrocarpon HOM05D005167 ORTHO05D006312 4.3e-137 492.3 479 58.0
Rhsim05G0120900 Rhododendron simsii HOM05D005167 ORTHO05D006312 1.3e-136 490.7 486 58.0
SalBow3G4053 Salvia bowleyana HOM05D005167 ORTHO05D006312 1.3e-136 490.7 461 57.3
Cc02_g36800 Coffea canephora HOM05D005167 ORTHO05D006312 1.0e-133 481.1 445 58.7
SGA_v2.0_scaffold401G50971 Striga asiatica HOM05D005167 ORTHO05D006312 2.3e-130 469.9 469 53.9
Migut.N00879 Erythranthe guttata HOM05D005167 ORTHO05D006312 1.1e-129 467.6 464 55.6
Atru.chr6.56 Acer truncatum HOM05D005167 ORTHO05D006312 2.5e-129 466.5 467 53.7
Nn5g27095 Nelumbo nucifera HOM05D005167 ORTHO05D006312 6.2e-128 461.8 486 54.1
DCAR_029460 Daucus carota HOM05D005167 ORTHO05D006312 2.0e-126 456.8 477 52.6
PGR042G3689 Punica granatum HOM05D005167 ORTHO05D006312 5.8e-126 455.3 482 52.5
ECA248G1565 Erigeron canadensis HOM05D005167 ORTHO05D006312 8.4e-125 451.4 478 52.9
Thecc.06G025200 Theobroma cacao HOM05D005167 ORTHO05D006312 2.5e-124 449.9 478 53.8
Haze_09951 Corylus avellana HOM05D005167 ORTHO05D006312 7.4e-121 438.3 474 53.4
HanXRQChr15g0488451 Helianthus annuus HOM05D005167 ORTHO05D006312 7.4e-121 438.3 466 53.4
QL02p104239 Quercus lobata HOM05D005167 ORTHO05D006312 1.3e-120 437.6 478 53.1
Gohir.D05G124100 Gossypium hirsutum HOM05D005167 ORTHO05D006312 3.7e-120 436.0 476 51.5
TWI23G0323 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 4.8e-120 435.6 477 53.0
Gorai.009G128100 Gossypium raimondii HOM05D005167 ORTHO05D006312 8.2e-120 434.9 483 51.3
arahy.Tifrunner.gnm1.ann1.JG47X3 Arachis hypogaea HOM05D005167 ORTHO05D006312 5.3e-119 432.2 456 52.9
Ciclev10001110m.g Citrus clementina HOM05D005167 ORTHO05D006312 5.9e-118 428.7 476 51.9
arahy.Tifrunner.gnm1.ann1.T4BBUF Arachis hypogaea HOM05D005167 ORTHO05D006312 4.2e-116 422.5 463 52.1
Sc07g0003350 Simmondsia chinensis HOM05D005167 ORTHO05D006312 4.2e-116 422.5 452 51.1
Sc07g0003360 Simmondsia chinensis HOM05D005167 ORTHO05D006312 4.2e-116 422.5 452 51.1
EL10Ac6g13938 Beta vulgaris HOM05D005167 ORTHO05D006312 2.7e-115 419.9 451 51.0
Hund15261 Selenicereus undatus HOM05D005167 ORTHO05D006312 7.9e-115 418.3 464 51.3
Potri.003G046300 Populus trichocarpa HOM05D005167 ORTHO05D006312 3.9e-114 416.0 442 53.8
CiPaw.09G096800 Carya illinoinensis HOM05D005167 ORTHO05D006312 6.7e-114 415.2 436 54.4
Sabra03G0019800 Salix brachista HOM05D005167 ORTHO05D006312 3.7e-112 409.5 484 50.6
Ah.02g128610 Amaranthus hybridus HOM05D005167 ORTHO05D006312 4.8e-112 409.1 468 50.6
Duzib160G0520 Durio zibethinus HOM05D005167 ORTHO05D006312 6.3e-112 408.7 432 54.4
Lj6g0014124 Lotus japonicus HOM05D005167 ORTHO05D006312 1.1e-111 407.9 477 50.5
Manes.06G015900 Manihot esculenta HOM05D005167 ORTHO05D006312 1.4e-111 407.5 438 54.6
CANSAT01G2096 Cannabis sativa HOM05D005167 ORTHO05D006312 5.0e-109 399.1 501 49.3
Glyma.09G018700 Glycine max HOM05D005167 ORTHO05D006312 5.1e-106 389.0 438 52.1
Gohir.A05G123200 Gossypium hirsutum HOM05D005167 ORTHO05D006312 8.8e-106 388.3 427 52.0
Phvul.006G133500 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 2.6e-105 386.7 469 48.6
PSO170G3824 Papaver somniferum HOM05D005167 ORTHO05D006312 4.4e-105 386.0 466 48.9
HPP92_025056 Vanilla planifolia HOM05D005167 ORTHO05D006312 5.9e-102 375.6 455 46.6
THA.LOC104809040 Tarenaya hassleriana HOM05D005167 ORTHO05D006312 1.3e-101 374.4 517 44.9
VMungo0540G0564 Vigna mungo HOM05D005167 ORTHO05D006312 2.9e-101 373.2 454 48.0
Os07g0657600 Oryza sativa ssp. japonica HOM05D005167 ORTHO05D006312 1.9e-100 370.5 465 46.5
Eucgr.G00036 Eucalyptus grandis HOM05D005167 ORTHO05D006312 8.2e-96 355.1 400 50.5
ATR0782G113 Amborella trichopoda HOM05D005167 ORTHO05D006312 1.7e-93 347.4 464 46.3
Atru.chr6.45 Acer truncatum HOM05D005167 ORTHO05D006312 9.4e-92 341.7 439 47.8
AUR62024866 Chenopodium quinoa HOM05D005167 ORTHO05D006312 4.7e-91 339.3 384 50.5
Actinidia12290 Actinidia chinensis HOM05D005167 ORTHO05D006312 4.9e-80 302.8 452 41.8
Oeu000169.3 Olea europaea HOM05D005167 ORTHO05D006312 2.3e-74 283.9 319 51.4
Dinv01746 Davidia involucrata HOM05D005167 ORTHO05D006312 2.6e-73 280.4 435 39.5
Thecc.07G187300 Theobroma cacao HOM05D005167 ORTHO05D006312 1.3e-72 278.1 449 38.1
Nn3g20631 Nelumbo nucifera HOM05D005167 ORTHO05D006312 1.6e-70 271.2 450 38.0
Duzib116G0260 Durio zibethinus HOM05D005167 ORTHO05D006312 5.2e-66 256.1 454 37.0
CiPaw.15G107300 Carya illinoinensis HOM05D005167 ORTHO05D006312 7.5e-65 252.3 442 37.1
QL93p0255_0001 Quercus lobata HOM05D005167 ORTHO05D006312 1.4e-63 248.1 343 46.1
Aqoxy4G01544 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 3.2e-63 246.9 487 35.1
Sed0010261 Sechium edule HOM05D005167 ORTHO05D006312 3.2e-63 246.9 451 37.0
Cpa.g.sc15.42 Carica papaya HOM05D005167 ORTHO05D006312 4.1e-63 246.5 433 37.4
Atru.chr9.69 Acer truncatum HOM05D005167 ORTHO05D006312 9.2e-63 245.4 457 35.0
FAN19G3173 Fragaria x ananassa HOM05D005167 ORTHO05D006312 8.6e-61 238.8 448 37.5
Gohir.D09G002700 Gossypium hirsutum HOM05D005167 ORTHO05D006312 2.5e-60 237.3 447 34.9
CANSAT64G2797 Cannabis sativa HOM05D005167 ORTHO05D006312 9.5e-60 235.3 440 36.6
FAN26G1264 Fragaria x ananassa HOM05D005167 ORTHO05D006312 9.5e-60 235.3 448 37.3
BcaB03g16877 Brassica carinata HOM05D005167 ORTHO05D006312 1.6e-59 234.6 433 34.2
RcHm_v2.0_Chr3g0496761 Rosa chinensis HOM05D005167 ORTHO05D006312 2.1e-59 234.2 490 34.9
SpUn0422_0010 Schrenkiella parvula HOM05D005167 ORTHO05D006312 6.2e-59 232.6 436 34.4
Thhalv10028036m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 1.4e-58 231.5 430 35.1
CiPaw.15G107200 Carya illinoinensis HOM05D005167 ORTHO05D006312 2.3e-58 230.7 383 38.1
C07p02160 Brassica napus HOM05D005167 ORTHO05D006312 6.8e-58 229.2 434 34.1
BolC7t40625H Brassica oleracea HOM05D005167 ORTHO05D006312 6.8e-58 229.2 434 34.1
A03p66890 Brassica napus HOM05D005167 ORTHO05D006312 8.9e-58 228.8 434 34.1
BraA01t02792Z Brassica rapa HOM05D005167 ORTHO05D006312 8.9e-58 228.8 434 34.1
CARHR046110 Cardamine hirsuta HOM05D005167 ORTHO05D006312 8.9e-58 228.8 435 33.8
Carub.0003s3540 Capsella rubella HOM05D005167 ORTHO05D006312 1.2e-57 228.4 448 33.5
MD00G1096100 Malus domestica HOM05D005167 ORTHO05D006312 1.5e-57 228.0 463 37.6
Lju225A7G63 Lonicera japonica HOM05D005167 ORTHO05D006312 4.4e-57 226.5 450 34.9
ClCG04G000020 Citrullus lanatus HOM05D005167 ORTHO05D006312 6.4e-56 222.6 447 35.3
ClCG08G000010 Citrullus lanatus HOM05D005167 ORTHO05D006312 3.2e-55 220.3 448 35.5
TAR629G0123 Trochodendron aralioides HOM05D005167 ORTHO05D006312 6.6e-53 212.6 418 35.9
MBI17_g35115_MAGBIO Magnolia biondii HOM05D005167 ORTHO05D006312 8.6e-53 212.2 202 55.0
SGA_v2.0_scaffold150G36624 Striga asiatica HOM05D005167 ORTHO05D006312 3.3e-52 210.3 466 32.4
Manes.18G143300 Manihot esculenta HOM05D005167 ORTHO05D006312 9.5e-52 208.8 371 38.5
Prupe.4G287800 Prunus persica HOM05D005167 ORTHO05D006312 6.2e-51 206.1 362 38.4
Lsat_1_v5_gn_8_167100 Lactuca sativa HOM05D005167 ORTHO05D006312 1.1e-50 205.3 429 34.0
Glyma.13G026000 Glycine max HOM05D005167 ORTHO05D006312 5.8e-49 199.5 396 34.1
GSVIVG01029417001 Vitis vinifera HOM05D005167 ORTHO05D006312 7.6e-49 199.1 362 37.8
TWI31G1352 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 1.1e-47 195.3 348 37.1
Manes.18G143000 Manihot esculenta HOM05D005167 ORTHO05D006312 1.4e-47 194.9 437 33.4
MELO3C034515.2 Cucumis melo HOM05D005167 ORTHO05D006312 2.4e-47 194.1 444 32.7
Actinidia01647 Actinidia chinensis HOM05D005167 ORTHO05D006312 3.2e-47 193.7 171 57.3
Gorai.006G003300 Gossypium raimondii HOM05D005167 ORTHO05D006312 1.7e-45 188.0 352 33.5
Ciclev10030405m.g Citrus clementina HOM05D005167 ORTHO05D006312 1.5e-44 184.9 399 32.8
CDE02G4394 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 1.6e-43 181.4 199 48.2
PGSC0003DMG400014526 Solanum tuberosum HOM05D005167 ORTHO05D006312 6.2e-43 179.5 428 31.3
Lju225C0G3 Lonicera japonica HOM05D005167 ORTHO05D006312 3.1e-42 177.2 435 31.5
CAN.G989.3 Capsicum annuum HOM05D005167 ORTHO05D006312 5.2e-42 176.4 379 31.9
COL.COLO4_11943 Corchorus olitorius HOM05D005167 ORTHO05D006312 5.2e-42 176.4 237 44.7
Cc00_g01280 Coffea canephora HOM05D005167 ORTHO05D006312 8.9e-42 175.6 390 31.5
BcaC08g44461 Brassica carinata HOM05D005167 ORTHO05D006312 2.6e-41 174.1 372 31.7
Phvul.L001673 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 1.7e-40 171.4 377 33.2
Gohir.A09G002900 Gossypium hirsutum HOM05D005167 ORTHO05D006312 4.9e-40 169.9 325 32.9
HanXRQChr12g0386151 Helianthus annuus HOM05D005167 ORTHO05D006312 1.9e-39 167.9 446 28.7
Sopen02g001190 Solanum pennellii HOM05D005167 ORTHO05D006312 3.2e-39 167.2 375 32.8
Nitab4.5_0005690g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.0e-37 162.2 377 30.8
AUR62032503 Chenopodium quinoa HOM05D005167 ORTHO05D000001 1.7e-37 161.4 346 34.1
FvH4_1g27954 Fragaria vesca HOM05D005167 ORTHO05D006312 2.3e-37 161.0 163 52.8
QL93p1868_0059 Quercus lobata HOM05D005167 ORTHO05D006312 1.8e-34 151.4 162 44.4
TWI15G0790 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 4.0e-34 150.2 162 51.2
MBI17_g35871_MAGBIO Magnolia biondii HOM05D005167 ORTHO05D006312 3.4e-33 147.1 106 66.0
QL07p001518 Quercus lobata HOM05D005167 ORTHO05D006312 4.4e-33 146.7 280 37.9
Nitab4.5_0001246g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.1e-31 142.1 365 29.9
CDE02G1408 Ceratophyllum demersum HOM05D005167 ORTHO05D006312 1.4e-31 141.7 133 56.4
Nitab4.5_0007926g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 7.1e-31 139.4 363 29.5
Eucgr.B01586 Eucalyptus grandis HOM05D005167 ORTHO05D006312 1.6e-30 138.3 389 30.6
BcaC06g36613 Brassica carinata HOM05D005167 ORTHO05D006312 2.7e-30 137.5 290 31.4
C06p19120 Brassica napus HOM05D005167 ORTHO05D006312 3.0e-29 134.0 305 33.4
BolC6t37111H Brassica oleracea HOM05D005167 ORTHO05D006312 3.0e-29 134.0 305 33.4
QL93p1868_0064 Quercus lobata HOM05D005167 ORTHO05D006312 8.7e-29 132.5 146 49.3
QL01p052835 Quercus lobata HOM05D005167 ORTHO05D006312 2.5e-28 131.0 146 48.6
A07p01000 Brassica napus HOM05D005167 ORTHO05D006312 3.3e-28 130.6 150 48.7
ECA234G3362 Erigeron canadensis HOM05D005167 ORTHO05D006312 7.4e-28 129.4 387 28.9
Thhalv10028065m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 2.1e-27 127.9 145 48.3
QL01p053234 Quercus lobata HOM05D005167 ORTHO05D006312 6.2e-27 126.3 162 40.1
BcaC06g31947 Brassica carinata HOM05D005167 ORTHO05D006312 2.0e-25 121.3 292 28.8
Gohir.D07G228750 Gossypium hirsutum HOM05D005167 ORTHO05D006312 9.3e-23 112.5 403 26.3
Dinv42629 Davidia involucrata HOM05D005167 ORTHO05D006312 2.7e-22 110.9 70 71.4
HanXRQChr12g0378911 Helianthus annuus HOM05D005167 ORTHO05D006312 6.7e-21 106.3 154 36.4
Gorai.001G263800 Gossypium raimondii HOM05D005167 ORTHO05D006312 1.9e-20 104.8 403 26.8
SpUn0005_0090 Schrenkiella parvula HOM05D005167 ORTHO05D006312 3.7e-19 100.5 121 42.1
Gohir.A12G103850 Gossypium hirsutum HOM05D005167 ORTHO05D006312 3.1e-18 97.4 116 50.0
Aqoxy4G01501 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 2.0e-17 94.7 161 37.9
Atru.chr9.63 Acer truncatum HOM05D005167 ORTHO05D006312 5.8e-17 93.2 108 44.4
PGSC0003DMG400040448 Solanum tuberosum HOM05D005167 ORTHO05D006312 3.8e-16 90.5 120 43.3
Eucgr.B01611 Eucalyptus grandis HOM05D005167 ORTHO05D006312 1.4e-15 88.6 104 44.2
Rhsim04G0168400 Rhododendron simsii HOM05D000018 ORTHO05D008577 6.7e-13 79.7 76 57.9
BcaC06g31946 Brassica carinata HOM05D005167 ORTHO05D006312 3.1e-10 70.9 91 40.7
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 5.0e-08 63.5 65 47.7
COL.COLO4_16251 Corchorus olitorius HOM05D005167 ORTHO05D006312 2.1e-06 58.2 88 38.6


User provided reference genes

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