Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004168g0140 Nicotiana tabacum HOM05D007266 ORTHO05D005982 1.9e-234 815.5 403 100.0
Nitab4.5_0002838g0050 Nicotiana tabacum HOM05D007266 ORTHO05D005982 1.9e-178 629.4 345 91.6
PGSC0003DMG402003286 Solanum tuberosum HOM05D007266 ORTHO05D005982 2.6e-135 486.1 353 74.2
CAN.G134.28 Capsicum annuum HOM05D005009 ORTHO05D006203 1.2e-132 477.2 352 71.3
Sopen01g040350 Solanum pennellii HOM05D007266 ORTHO05D005982 6.0e-132 474.9 354 73.4
Peaxi162Scf00220g00314 Petunia axillaris HOM05D007266 ORTHO05D005982 2.0e-79 300.4 209 76.1
Solyc01g096620.4 Solanum lycopersicum HOM05D007266 ORTHO05D005982 1.7e-70 270.8 207 72.5
Peaxi162Scf00220g00313 Petunia axillaris HOM05D007266 ORTHO05D005982 2.2e-54 217.2 144 77.8
Solyc01g096630.3 Solanum lycopersicum HOM05D007266 ORTHO05D005982 5.4e-40 169.5 122 73.0
FAN03G0408 Fragaria x ananassa HOM05D007266 ORTHO05D005982 3.2e-32 143.7 360 36.9
Oeu013066.1 Olea europaea HOM05D007266 ORTHO05D005982 3.2e-32 143.7 321 34.9
Sabra01G0022900 Salix brachista HOM05D007266 ORTHO05D005982 7.0e-32 142.5 331 35.0
FAN01G0656 Fragaria x ananassa HOM05D007266 ORTHO05D005982 1.6e-31 141.4 354 34.7
FvH4_7g03880 Fragaria vesca HOM05D007266 ORTHO05D005982 4.6e-31 139.8 344 34.3
FAN06G1886 Fragaria x ananassa HOM05D007266 ORTHO05D005982 6.0e-31 139.4 353 34.6
FAN10G1696 Fragaria x ananassa HOM05D007266 ORTHO05D005982 6.0e-31 139.4 352 34.9
Manes.04G156300 Manihot esculenta HOM05D007266 ORTHO05D005982 1.1e-29 135.2 361 33.8
RcHm_v2.0_Chr1g0327331 Rosa chinensis HOM05D007266 ORTHO05D005982 1.5e-29 134.8 349 35.2
Atru.chr12.1311 Acer truncatum HOM05D007266 ORTHO05D005982 1.2e-28 131.7 349 31.8
Oeu058685.1 Olea europaea HOM05D007266 ORTHO05D005982 4.7e-28 129.8 332 34.6
Actinidia01519 Actinidia chinensis HOM05D007266 ORTHO05D005982 2.3e-27 127.5 349 33.8
CiPaw.14G009500 Carya illinoinensis HOM05D007266 ORTHO05D005982 3.1e-27 127.1 362 33.1
Potri.001G031800 Populus trichocarpa HOM05D007266 ORTHO05D005982 5.2e-27 126.3 308 36.4
MD07G1043900 Malus domestica HOM05D007266 ORTHO05D005982 2.0e-26 124.4 343 32.7
Prupe.2G043600 Prunus persica HOM05D007266 ORTHO05D005982 2.0e-26 124.4 359 31.2
CiPaw.06G056200 Carya illinoinensis HOM05D007266 ORTHO05D005982 2.6e-26 124.0 351 33.6
TAR633G1403 Trochodendron aralioides HOM05D007266 ORTHO05D005982 3.4e-26 123.6 343 30.0
Cfa010951 Carpinus fangiana HOM05D007266 ORTHO05D005982 4.4e-26 123.2 367 31.6
Thecc.10G142300 Theobroma cacao HOM05D007266 ORTHO05D005982 4.4e-26 123.2 360 33.3
Actinidia01687 Actinidia chinensis HOM05D000639 ORTHO05D007519 2.2e-25 120.9 330 35.2
vmacro21145 Vaccinium macrocarpon HOM05D007266 ORTHO05D005982 1.4e-24 118.2 371 32.6
Haze_02992 Corylus avellana HOM05D007266 ORTHO05D005982 1.9e-24 117.9 377 30.5
Manes.11G007700 Manihot esculenta HOM05D007266 ORTHO05D005982 7.0e-24 115.9 345 31.9
TWI38G2050 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 1.6e-23 114.8 222 36.9
TWI15G1169 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 4.6e-23 113.2 334 31.4
COL.COLO4_06637 Corchorus olitorius HOM05D007266 ORTHO05D005982 7.8e-23 112.5 379 29.3
Gorai.009G299100 Gossypium raimondii HOM05D007266 ORTHO05D005982 7.8e-23 112.5 324 30.6
Rhsim01G0124500 Rhododendron simsii HOM05D007266 ORTHO05D005982 1.3e-22 111.7 379 32.2
TAR369G0213 Trochodendron aralioides HOM05D007266 ORTHO05D005982 6.6e-22 109.4 380 29.5
Hma1.2p1_0837F.1_g226230 Hydrangea macrophylla HOM05D007266 ORTHO05D005982 1.1e-21 108.6 337 31.2
Lj9C658G11 Lonicera japonica HOM05D007266 ORTHO05D005982 9.5e-21 105.5 218 39.4
Hund13391 Selenicereus undatus HOM05D007266 ORTHO05D005982 2.8e-20 104.0 360 30.0
PGR044G2654 Punica granatum HOM05D007266 ORTHO05D005982 3.6e-20 103.6 315 29.8
TWI63G1068 Tripterygium wilfordii HOM05D007266 ORTHO05D005982 3.6e-20 103.6 280 32.1
GSVIVG01036604001 Vitis vinifera HOM05D007266 ORTHO05D005982 3.6e-20 103.6 218 35.8
SalBow5G4193 Salvia bowleyana HOM05D007266 ORTHO05D005982 6.2e-20 102.8 310 29.7
Gohir.A05G283500 Gossypium hirsutum HOM05D007266 ORTHO05D005982 1.4e-19 101.7 324 29.0
HanXRQChr05g0146291 Helianthus annuus HOM05D007266 ORTHO05D005982 4.0e-19 100.1 311 31.5
Lsat_1_v5_gn_1_118261 Lactuca sativa HOM05D007266 ORTHO05D005982 4.9e-17 93.2 273 31.5
Duzib128G0414 Durio zibethinus HOM05D007266 ORTHO05D005982 6.4e-17 92.8 335 30.1
Sabra03G0144500 Salix brachista HOM05D007266 ORTHO05D005982 6.4e-17 92.8 441 25.4
DCAR_029711 Daucus carota HOM05D007266 ORTHO05D005982 8.3e-17 92.4 353 28.6
ECA248G2125 Erigeron canadensis HOM05D007266 ORTHO05D005982 1.9e-16 91.3 259 31.3
HanXRQChr11g0341241 Helianthus annuus HOM05D007266 ORTHO05D005982 1.9e-16 91.3 204 35.8
FAN03G2213 Fragaria x ananassa HOM05D007266 ORTHO05D005982 4.1e-16 90.1 112 50.9
Migut.B01189 Erythranthe guttata HOM05D007266 ORTHO05D005982 2.1e-15 87.8 318 28.6
Dinv11235 Davidia involucrata HOM05D007266 ORTHO05D005982 6.0e-15 86.3 362 30.1
Lj3g0024959 Lotus japonicus HOM05D007266 ORTHO05D005982 1.7e-14 84.7 324 28.4
Potri.003G193800 Populus trichocarpa HOM05D007266 ORTHO05D005982 2.3e-14 84.3 181 35.9
arahy.Tifrunner.gnm1.ann1.IJY9PN Arachis hypogaea HOM05D007266 ORTHO05D005982 3.0e-14 84.0 317 28.1
arahy.Tifrunner.gnm1.ann1.E0LNSJ Arachis hypogaea HOM05D007266 ORTHO05D005982 3.9e-14 83.6 341 27.3
arahy.Tifrunner.gnm1.ann1.78H5KP Arachis hypogaea HOM05D007266 ORTHO05D005982 6.6e-14 82.8 319 28.5
CANSAT56G2989 Cannabis sativa HOM05D007266 ORTHO05D005982 1.1e-13 82.0 333 28.8
Gohir.D05G284500 Gossypium hirsutum HOM05D007266 ORTHO05D005982 5.6e-13 79.7 96 45.8
Medtr8g040640 Medicago truncatula HOM05D007266 ORTHO05D005982 5.6e-13 79.7 339 27.7
SGA_v2.0_scaffold124G33643 Striga asiatica HOM05D007266 ORTHO05D005982 7.3e-13 79.3 316 28.2
CSS0040931 Camellia sinensis var. sinensis HOM05D007266 ORTHO05D005982 9.5e-13 79.0 194 35.1
Eucgr.J00068 Eucalyptus grandis HOM05D007266 ORTHO05D005982 1.2e-12 78.6 346 27.2
Glyma.13G191900 Glycine max HOM05D007266 ORTHO05D005982 1.2e-12 78.6 332 29.2
VMungo1080G1603 Vigna mungo HOM05D007266 ORTHO05D005982 1.2e-12 78.6 334 27.5
Thhalv10014291m.g Eutrema salsugineum HOM05D008873 ORTHO05D005982 1.6e-12 78.2 315 27.9
Lalb_Chr19g0132921 Lupinus albus HOM05D007266 ORTHO05D005982 2.1e-12 77.8 345 27.0
Phvul.005G018800 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 2.1e-12 77.8 334 28.4
Sp6g35890 Schrenkiella parvula HOM05D008873 ORTHO05D005982 3.6e-12 77.0 323 28.5
Ca_24011_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 8.1e-12 75.9 324 26.5
Ca_24018_v3 Cicer arietinum L. HOM05D007266 ORTHO05D005982 8.1e-12 75.9 324 26.5
Glyma.04G133400 Glycine max HOM05D007266 ORTHO05D005982 8.1e-12 75.9 338 27.2
QL04p021455 Quercus lobata HOM05D007266 ORTHO05D005982 8.1e-12 75.9 189 31.2
QL07p029255 Quercus lobata HOM05D007266 ORTHO05D005982 8.1e-12 75.9 189 31.2
THA.LOC104799328 Tarenaya hassleriana HOM05D008873 ORTHO05D005982 8.1e-12 75.9 310 30.0
Carub.0006s0591 Capsella rubella HOM05D008873 ORTHO05D005982 1.1e-11 75.5 323 29.1
Aa31LG3G6540 Aethionema arabicum HOM05D008873 ORTHO05D005982 1.4e-11 75.1 252 31.3
Nn7g36823 Nelumbo nucifera HOM05D007266 ORTHO05D005982 1.4e-11 75.1 350 26.0
arahy.Tifrunner.gnm1.ann1.5HCQ47 Arachis hypogaea HOM05D007266 ORTHO05D005982 2.4e-11 74.3 342 27.8
Thhalv10021314m.g Eutrema salsugineum HOM05D008873 ORTHO05D005982 2.4e-11 74.3 221 30.8
Psat4g144600 Pisum sativum HOM05D007266 ORTHO05D005982 3.1e-11 73.9 320 26.9
AL6G17140 Arabidopsis lyrata HOM05D008873 ORTHO05D005982 4.0e-11 73.6 312 27.2
Ah.12g065060 Amaranthus hybridus HOM05D007266 ORTHO05D005982 6.8e-11 72.8 330 28.2
BcaC01g04052 Brassica carinata HOM05D008873 ORTHO05D005982 1.2e-10 72.0 223 30.5
A03p37600 Brassica napus HOM05D008873 ORTHO05D005982 1.2e-10 72.0 223 30.5
C03p45590 Brassica napus HOM05D008873 ORTHO05D005982 1.2e-10 72.0 223 30.5
BolC3t16836H Brassica oleracea HOM05D008873 ORTHO05D005982 1.2e-10 72.0 223 30.5
AUR62031740 Chenopodium quinoa HOM05D007266 ORTHO05D005982 1.5e-10 71.6 371 27.2
BraA03t12914Z Brassica rapa HOM05D008873 ORTHO05D005982 2.6e-10 70.9 223 30.5
Glyma.11G158200 Glycine max HOM05D007266 ORTHO05D005982 2.6e-10 70.9 230 28.7
TPR.G8521 Trifolium pratense HOM05D007266 ORTHO05D005982 2.6e-10 70.9 330 26.1
EL10Ac2g02761 Beta vulgaris HOM05D007266 ORTHO05D005982 5.8e-10 69.7 403 26.3
Cpa.g.sc169.34 Carica papaya HOM05D007266 ORTHO05D005982 5.8e-10 69.7 407 25.1
VMungo1127G1999 Vigna mungo HOM05D007266 ORTHO05D005982 5.8e-10 69.7 332 26.8
CARHR206160 Cardamine hirsuta HOM05D008873 ORTHO05D005982 7.6e-10 69.3 86 45.3
QL04p021458 Quercus lobata HOM05D007266 ORTHO05D005982 7.6e-10 69.3 118 39.8
QL07p029253 Quercus lobata HOM05D007266 ORTHO05D005982 7.6e-10 69.3 118 39.8
Ah.10g030010 Amaranthus hybridus HOM05D007266 ORTHO05D005982 1.3e-09 68.6 327 27.8
A05p37060 Brassica napus HOM05D008873 ORTHO05D005982 1.3e-09 68.6 228 30.7
Carub.0003s1168 Capsella rubella HOM05D008873 ORTHO05D005982 1.7e-09 68.2 220 31.8
Glyma.15G229400 Glycine max HOM05D007266 ORTHO05D005982 1.7e-09 68.2 327 27.8
Phvul.011G200200 Phaseolus vulgaris HOM05D007266 ORTHO05D005982 1.7e-09 68.2 329 24.6
CARHR086860 Cardamine hirsuta HOM05D008873 ORTHO05D005982 2.9e-09 67.4 219 29.7
PSO135G0681 Papaver somniferum HOM05D007266 ORTHO05D005982 3.8e-09 67.0 222 27.5
BcaB04g18684 Brassica carinata HOM05D008873 ORTHO05D005982 6.4e-09 66.2 112 38.4
BcaC06g32527 Brassica carinata HOM05D008873 ORTHO05D005982 1.1e-08 65.5 211 30.3
A10p28780 Brassica napus HOM05D008873 ORTHO05D005982 1.1e-08 65.5 212 30.2
BolC9t59656H Brassica oleracea HOM05D008873 ORTHO05D005982 1.1e-08 65.5 318 27.7
BraA10t44925Z Brassica rapa HOM05D008873 ORTHO05D005982 1.1e-08 65.5 212 30.2
MBI13_g09214_MAGBIO Magnolia biondii HOM05D007266 ORTHO05D005982 1.1e-08 65.5 318 23.9
C09p69120 Brassica napus HOM05D008873 ORTHO05D005982 1.4e-08 65.1 318 27.7
Sp3g10530 Schrenkiella parvula HOM05D008873 ORTHO05D005982 1.4e-08 65.1 215 28.8
BcaNung04207 Brassica carinata HOM05D008873 ORTHO05D005982 1.9e-08 64.7 210 30.5
C05p55490 Brassica napus HOM05D008873 ORTHO05D005982 1.9e-08 64.7 264 28.4
AT3G12320 Arabidopsis thaliana HOM05D008873 ORTHO05D005982 3.2e-08 63.9 220 31.8
BcaB04g21084 Brassica carinata HOM05D008873 ORTHO05D005982 3.2e-08 63.9 220 29.5
BcaB04g21086 Brassica carinata HOM05D008873 ORTHO05D005982 3.2e-08 63.9 220 29.5
PSO384G1467 Papaver somniferum HOM05D007266 ORTHO05D005982 4.1e-08 63.5 224 27.2
AL3G23970 Arabidopsis lyrata HOM05D008873 ORTHO05D005982 9.2e-08 62.4 109 40.4
Ciclev10001901m.g Citrus clementina HOM05D007266 ORTHO05D005982 1.2e-07 62.0 238 28.2
Dinv32008 Davidia involucrata HOM05D007266 ORTHO05D005982 1.2e-07 62.0 189 28.6
AUR62032625 Chenopodium quinoa HOM05D007266 ORTHO05D005982 1.6e-07 61.6 215 27.9
Lalb_Chr01g0007431 Lupinus albus HOM05D007266 ORTHO05D005982 1.6e-07 61.6 153 29.4
BraA05t22503Z Brassica rapa HOM05D008873 ORTHO05D005982 7.8e-07 59.3 282 26.6
BcaC05g29270 Brassica carinata HOM05D008873 ORTHO05D005982 1.0e-06 58.9 264 27.3
BolC5t34215H Brassica oleracea HOM05D008873 ORTHO05D005982 1.7e-06 58.2 107 37.4
TAR623G0806 Trochodendron aralioides HOM05D007266 ORTHO05D005982 5.1e-06 56.6 135 34.1
BcaB01g05709 Brassica carinata HOM05D008873 ORTHO05D005982 6.6e-06 56.2 171 30.4
CSS0028207 Camellia sinensis var. sinensis HOM05D004414 ORTHO05D001824 8.7e-06 55.8 117 34.2


User provided reference genes

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