Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004168g0130 Nicotiana tabacum HOM05D005009 ORTHO05D006203 3.6e-58 228.0 114 100.0
Nitab4.5_0002838g0060 Nicotiana tabacum HOM05D005009 ORTHO05D006203 4.4e-56 221.1 112 98.2
Solyc01g096610.4 Solanum lycopersicum HOM05D005009 ORTHO05D006203 1.8e-54 215.7 109 97.2
Sopen01g040340 Solanum pennellii HOM05D005009 ORTHO05D006203 1.8e-54 215.7 109 97.2
PGSC0003DMG401003286 Solanum tuberosum HOM05D005009 ORTHO05D006203 1.8e-54 215.7 109 97.2
CiPaw.14G009400 Carya illinoinensis HOM05D005009 ORTHO05D006203 3.9e-52 208.0 109 92.7
Cc03_g14060 Coffea canephora HOM05D005009 ORTHO05D006203 5.0e-52 207.6 109 92.7
Sabra03G0144600 Salix brachista HOM05D005009 ORTHO05D006203 5.0e-52 207.6 110 91.8
Potri.003G193900 Populus trichocarpa HOM05D005009 ORTHO05D006203 6.6e-52 207.2 109 92.7
arahy.Tifrunner.gnm1.ann1.CDA2TW Arachis hypogaea HOM05D005009 ORTHO05D006203 8.6e-52 206.8 110 90.9
CDE08G1579 Ceratophyllum demersum HOM05D005009 ORTHO05D006203 1.1e-51 206.5 109 91.7
Haze_02993 Corylus avellana HOM05D005009 ORTHO05D006203 1.5e-51 206.1 111 90.1
Rhsim07G0069300 Rhododendron simsii HOM05D005009 ORTHO05D006203 1.5e-51 206.1 110 91.8
Eucgr.E03953 Eucalyptus grandis HOM05D005009 ORTHO05D006203 1.9e-51 205.7 109 92.7
TWI15G1146 Tripterygium wilfordii HOM05D005009 ORTHO05D006203 1.9e-51 205.7 109 90.8
MSTRG.20500 Avicennia marina HOM05D005009 ORTHO05D006203 2.5e-51 205.3 109 91.7
Eucgr.G03210 Eucalyptus grandis HOM05D005009 ORTHO05D006203 2.5e-51 205.3 109 92.7
unitig_22.g5330 Utricularia gibba HOM05D005009 ORTHO05D006203 2.5e-51 205.3 110 90.9
Medtr8g040630 Medicago truncatula HOM05D005009 ORTHO05D006203 3.3e-51 204.9 112 88.4
Phvul.011G192750 Phaseolus vulgaris HOM05D005009 ORTHO05D006203 3.3e-51 204.9 109 90.8
Hund13390 Selenicereus undatus HOM05D005009 ORTHO05D006203 3.3e-51 204.9 109 91.7
TPR.G8532 Trifolium pratense HOM05D005009 ORTHO05D006203 3.3e-51 204.9 111 89.2
Lsat_1_v5_gn_1_117041 Lactuca sativa HOM05D005009 ORTHO05D006203 4.3e-51 204.5 109 91.7
MBI19_g37444_MAGBIO Magnolia biondii HOM05D005009 ORTHO05D006203 4.3e-51 204.5 110 91.8
PGR031G2406 Punica granatum HOM05D005009 ORTHO05D006203 4.3e-51 204.5 109 90.8
SEGI_18977 Sequoiadendron giganteum HOM05D005009 ORTHO05D006203 4.3e-51 204.5 109 91.7
Ah.01g018000 Amaranthus hybridus HOM05D005009 ORTHO05D006203 5.6e-51 204.1 109 90.8
Aqoxy2G00437 Aquilegia oxysepala HOM05D005009 ORTHO05D006203 5.6e-51 204.1 109 90.8
CSS0011052 Camellia sinensis var. sinensis HOM05D005009 ORTHO05D006203 5.6e-51 204.1 109 91.7
FvH4_7g03830 Fragaria vesca HOM05D005009 ORTHO05D006203 5.6e-51 204.1 109 90.8
FAN03G3221 Fragaria x ananassa HOM05D005009 ORTHO05D006203 5.6e-51 204.1 109 90.8
FAN06G1190 Fragaria x ananassa HOM05D005009 ORTHO05D006203 5.6e-51 204.1 109 90.8
Lj3g0027433 Lotus japonicus HOM05D005009 ORTHO05D006203 7.3e-51 203.8 109 90.8
MD02G1276800 Malus domestica HOM05D005009 ORTHO05D006203 7.3e-51 203.8 110 89.1
Atru.chr12.1310 Acer truncatum HOM05D005009 ORTHO05D006203 9.5e-51 203.4 109 91.7
Actinidia06220 Actinidia chinensis HOM05D005009 ORTHO05D006203 9.5e-51 203.4 109 91.7
Migut.B01192 Erythranthe guttata HOM05D005009 ORTHO05D006203 9.5e-51 203.4 109 90.8
Psat4g146480 Pisum sativum HOM05D005009 ORTHO05D006203 9.5e-51 203.4 109 89.9
Thecc.03G114300 Theobroma cacao HOM05D005009 ORTHO05D006203 9.5e-51 203.4 109 90.8
AUR62031741 Chenopodium quinoa HOM05D005009 ORTHO05D006203 1.6e-50 202.6 109 89.9
Glyma.09G090300 Glycine max HOM05D005009 ORTHO05D006203 1.6e-50 202.6 109 89.0
Prupe.2G043300 Prunus persica HOM05D005009 ORTHO05D006203 1.6e-50 202.6 109 89.0
RcHm_v2.0_Chr1g0327201 Rosa chinensis HOM05D005009 ORTHO05D006203 1.6e-50 202.6 109 89.9
ECA248G2538 Erigeron canadensis HOM05D005009 ORTHO05D006203 2.8e-50 201.8 109 90.8
FAN10G3328 Fragaria x ananassa HOM05D005009 ORTHO05D006203 2.8e-50 201.8 109 89.9
Nn7g36825 Nelumbo nucifera HOM05D005009 ORTHO05D006203 2.8e-50 201.8 109 89.0
PSO384G0249 Papaver somniferum HOM05D005009 ORTHO05D006203 2.8e-50 201.8 109 90.8
EL10Ac2g02762 Beta vulgaris HOM05D005009 ORTHO05D006203 3.6e-50 201.4 109 89.9
DCAR_006603 Daucus carota HOM05D005009 ORTHO05D006203 3.6e-50 201.4 109 89.0
Duzib084G0080 Durio zibethinus HOM05D005009 ORTHO05D006203 3.6e-50 201.4 109 89.9
GSVIVG01036607001 Vitis vinifera HOM05D005009 ORTHO05D006203 3.6e-50 201.4 109 90.8
Zm00001eb317990 Zea mays HOM05D005009 ORTHO05D006203 3.6e-50 201.4 109 89.0
Glyma.13G188400 Glycine max HOM05D005009 ORTHO05D006203 4.7e-50 201.1 112 86.6
Lalb_Chr19g0132931 Lupinus albus HOM05D005009 ORTHO05D006203 4.7e-50 201.1 109 89.9
Manes.11G007500 Manihot esculenta HOM05D005009 ORTHO05D006203 4.7e-50 201.1 109 89.9
Sed0026819 Sechium edule HOM05D005009 ORTHO05D006203 4.7e-50 201.1 112 88.4
TAR633G2352 Trochodendron aralioides HOM05D005009 ORTHO05D006203 4.7e-50 201.1 109 89.9
HPP92_011756 Vanilla planifolia HOM05D005009 ORTHO05D006203 4.7e-50 201.1 110 90.0
PSO339G0131 Papaver somniferum HOM05D005009 ORTHO05D006203 6.2e-50 200.7 109 89.9
COL.COLO4_32171 Corchorus olitorius HOM05D000011 ORTHO05D006203 8.0e-50 200.3 109 87.2
AUR62032626 Chenopodium quinoa HOM05D005009 ORTHO05D006203 1.0e-49 199.9 109 88.1
Ciclev10002585m.g Citrus clementina HOM05D005009 ORTHO05D006203 1.0e-49 199.9 109 90.8
Mapoly0109s0062 Marchantia polymorpha HOM05D005009 ORTHO05D006203 1.0e-49 199.9 109 86.2
SGA_v2.0_scaffold408G51079 Striga asiatica HOM05D005009 ORTHO05D006203 1.0e-49 199.9 109 88.1
Dinv32009 Davidia involucrata HOM05D005009 ORTHO05D006203 1.4e-49 199.5 109 89.0
Duzib068G0995 Durio zibethinus HOM05D005009 ORTHO05D006203 1.4e-49 199.5 109 89.0
Hma1.2p1_0837F.1_g226250 Hydrangea macrophylla HOM05D005009 ORTHO05D006203 1.4e-49 199.5 110 88.2
Dinv11234 Davidia involucrata HOM05D005009 ORTHO05D006203 1.8e-49 199.1 109 87.2
MBI19_g44926_MAGBIO Magnolia biondii HOM05D005009 ORTHO05D006203 1.8e-49 199.1 110 89.1
ATR0307G112 Amborella trichopoda HOM05D005009 ORTHO05D006203 2.3e-49 198.7 109 89.0
QL04p021447 Quercus lobata HOM05D005009 ORTHO05D006203 2.3e-49 198.7 109 88.1
QL07p029267 Quercus lobata HOM05D005009 ORTHO05D006203 2.3e-49 198.7 109 88.1
Gohir.A03G073900 Gossypium hirsutum HOM05D005009 ORTHO05D006203 3.1e-49 198.4 109 88.1
Gohir.D03G100300 Gossypium hirsutum HOM05D005009 ORTHO05D006203 3.1e-49 198.4 109 88.1
Gorai.003G105400 Gossypium raimondii HOM05D005009 ORTHO05D006203 3.1e-49 198.4 109 88.1
Ca_24007_v3 Cicer arietinum L. HOM05D005009 ORTHO05D006203 4.0e-49 198.0 109 87.2
HanXRQChr11g0341231 Helianthus annuus HOM05D005009 ORTHO05D006203 4.0e-49 198.0 111 86.5
THA.LOC104826749 Tarenaya hassleriana HOM05D005009 ORTHO05D006203 4.0e-49 198.0 109 86.2
Carub.0003s1167 Capsella rubella HOM05D005009 ORTHO05D006203 5.2e-49 197.6 109 86.2
AL3G23960 Arabidopsis lyrata HOM05D005009 ORTHO05D006203 1.2e-48 196.4 109 85.3
ClCG05G027020 Citrullus lanatus HOM05D005009 ORTHO05D006203 1.5e-48 196.1 109 86.2
AT3G12300 Arabidopsis thaliana HOM05D005009 ORTHO05D006203 4.4e-48 194.5 109 84.4
CANSAT01G2494 Cannabis sativa HOM05D005009 ORTHO05D006203 5.8e-48 194.1 109 86.2
CsaV3_5G036940 Cucumis sativus L. HOM05D005009 ORTHO05D006203 5.8e-48 194.1 109 86.2
Sp3g10520 Schrenkiella parvula HOM05D005009 ORTHO05D006203 5.8e-48 194.1 109 84.4
C01p53010 Brassica napus HOM05D005009 ORTHO05D006203 7.5e-48 193.7 109 83.5
BolC1t05245H Brassica oleracea HOM05D005009 ORTHO05D006203 7.5e-48 193.7 109 83.5
BolC3t16835H Brassica oleracea HOM05D005009 ORTHO05D006203 1.3e-47 193.0 109 83.5
BcaB04g18685 Brassica carinata HOM05D005009 ORTHO05D006203 1.7e-47 192.6 109 83.5
Thhalv10021577m.g Eutrema salsugineum HOM05D005009 ORTHO05D006203 1.7e-47 192.6 109 83.5
A03p37590 Brassica napus HOM05D005009 ORTHO05D006203 2.2e-47 192.2 110 81.8
BcaC01g04053 Brassica carinata HOM05D005009 ORTHO05D006203 2.9e-47 191.8 109 82.6
C03p45580 Brassica napus HOM05D005009 ORTHO05D006203 2.9e-47 191.8 109 82.6
arahy.Tifrunner.gnm1.ann1.SBUN5C Arachis hypogaea HOM05D005009 ORTHO05D006203 4.9e-47 191.0 138 71.0
GSVIVG01028667001 Vitis vinifera HOM05D005009 ORTHO05D006203 4.9e-47 191.0 109 87.2
BcaC09g48230 Brassica carinata HOM05D005009 ORTHO05D006203 6.4e-47 190.7 109 82.6
A06p13990 Brassica napus HOM05D005009 ORTHO05D006203 6.4e-47 190.7 109 83.5
AagrBONN_evm.TU.Sc2ySwM_340.215 Anthoceros agrestis HOM05D005009 ORTHO05D006203 1.4e-46 189.5 109 82.6
Cre07.g351650 Chlamydomonas reinhardtii HOM05D005009 ORTHO05D006203 4.1e-46 188.0 109 78.9
MELO3C034019.2 Cucumis melo HOM05D005009 ORTHO05D006203 7.0e-46 187.2 116 81.0
Pp3c16_8300 Physcomitrium patens HOM05D005009 ORTHO05D006203 1.2e-45 186.4 110 79.1
PRCOL_00001494 Prasinoderma coloniale HOM05D005009 ORTHO05D006203 6.0e-45 184.1 109 79.8
Peaxi162Scf00220g00315 Petunia axillaris HOM05D005009 ORTHO05D006203 3.9e-44 181.4 91 97.8
SMO137G0355 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 6.6e-44 180.6 109 76.1
MCO01G737 Micromonas commoda HOM05D005009 ORTHO05D006203 1.5e-43 179.5 109 76.1
vmacro21942 Vaccinium macrocarpon HOM05D005009 ORTHO05D006203 6.2e-42 174.1 93 91.4
vmacro23458 Vaccinium macrocarpon HOM05D005009 ORTHO05D006203 6.2e-42 174.1 93 91.4
SMO137G0211 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 1.1e-41 173.3 109 72.5
Pp3c7_7130 Physcomitrium patens HOM05D005009 ORTHO05D006203 1.5e-40 169.5 109 71.6
Os09g0510200 Oryza sativa ssp. japonica HOM05D005009 ORTHO05D006203 8.3e-39 163.7 91 84.6
Aa31LG3G6530 Aethionema arabicum HOM05D005009 ORTHO05D006203 1.9e-38 162.5 109 72.5
CAN.G134.28 Capsicum annuum HOM05D005009 ORTHO05D006203 1.6e-37 159.5 82 96.3
Glyma.13G188051 Glycine max HOM05D005009 ORTHO05D006203 3.3e-35 151.8 85 85.9
Sc11g0006340 Simmondsia chinensis HOM05D005009 ORTHO05D006203 1.2e-34 149.8 82 87.8
VMungo1127G1850 Vigna mungo HOM05D005009 ORTHO05D006203 1.6e-34 149.4 88 83.0
CSS0003702 Camellia sinensis var. sinensis HOM05D005009 ORTHO05D006203 8.1e-34 147.1 81 87.7
Cpa.g.sc82.9 Carica papaya HOM05D005009 ORTHO05D006203 1.4e-33 146.4 81 85.2
HPP92_011758 Vanilla planifolia HOM05D005009 ORTHO05D006203 1.2e-32 143.3 109 69.7
Sed0013386 Sechium edule HOM05D005009 ORTHO05D006203 2.0e-32 142.5 89 78.7
SHI34551 Sapria himalayana HOM05D005009 ORTHO05D006203 3.4e-32 141.7 81 84.0
Haze_26638 Corylus avellana HOM05D005009 ORTHO05D006203 9.9e-32 140.2 110 62.7
Glyma.13G184700 Glycine max HOM05D005009 ORTHO05D006203 6.4e-31 137.5 82 82.9
Lj9A658G62 Lonicera japonica HOM05D005009 ORTHO05D006203 1.9e-30 136.0 74 89.2
Prupe.3G123900 Prunus persica HOM05D005009 ORTHO05D006203 4.3e-27 124.8 87 74.7
Pp3c25_460 Physcomitrium patens HOM05D005009 ORTHO05D006203 4.7e-26 121.3 96 61.5
ClCG05G014250 Citrullus lanatus HOM05D005009 ORTHO05D006203 6.2e-26 120.9 83 69.9
SMO232G0039 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 6.2e-26 120.9 109 54.1
SMO352G0037 Selaginella moellendorffii HOM05D005009 ORTHO05D006203 1.8e-25 119.4 127 49.6
CDE08G0779 Ceratophyllum demersum HOM05D005009 ORTHO05D006203 6.9e-09 64.3 32 93.8
Oeu064146.2 Olea europaea HOM05D005009 ORTHO05D006203 6.9e-09 64.3 32 93.8
Pp3c6_12450 Physcomitrium patens HOM05D005009 ORTHO05D006203 4.9e-07 58.2 75 38.7


User provided reference genes

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