Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 4.5e-122 441.4 247 100.0
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 2.9e-105 385.6 250 88.4
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 5.2e-102 374.8 248 85.1
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 3.3e-101 372.1 248 83.1
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 5.7e-101 371.3 248 82.7
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 1.3e-84 317.0 259 74.9
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 3.7e-68 262.3 207 69.6
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 8.3e-68 261.2 246 64.6
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 3.2e-67 259.2 243 61.3
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 1.6e-66 256.9 247 63.6
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 1.5e-64 250.4 244 60.7
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 4.3e-64 248.8 244 60.2
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 7.3e-64 248.1 241 60.2
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 7.3e-64 248.1 208 69.2
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 1.6e-63 246.9 242 62.4
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 2.1e-63 246.5 247 60.7
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 2.1e-63 246.5 243 62.1
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 3.6e-63 245.7 245 59.6
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 4.7e-63 245.4 237 62.9
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 1.1e-62 244.2 209 67.0
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 2.3e-62 243.0 209 68.4
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 4.0e-62 242.3 246 58.5
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 4.0e-62 242.3 250 57.2
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 4.0e-62 242.3 251 58.2
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 6.8e-62 241.5 209 67.0
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 6.8e-62 241.5 247 58.7
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 8.9e-62 241.1 194 69.6
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 1.2e-61 240.7 249 60.2
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 1.2e-61 240.7 236 61.4
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 2.0e-61 240.0 237 59.5
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 4.4e-61 238.8 209 66.0
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 7.5e-61 238.0 213 66.7
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 7.5e-61 238.0 150 78.7
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 9.8e-61 237.7 242 56.6
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 9.8e-61 237.7 240 58.8
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 9.8e-61 237.7 195 67.7
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 1.3e-60 237.3 251 59.8
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 1.7e-60 236.9 214 64.5
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 2.2e-60 236.5 207 65.2
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 3.7e-60 235.7 195 67.2
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 1.1e-59 234.2 246 56.5
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 1.1e-59 234.2 243 58.4
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 1.4e-59 233.8 157 75.8
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 1.4e-59 233.8 240 60.8
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 1.9e-59 233.4 210 62.4
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 1.9e-59 233.4 242 58.3
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 2.4e-59 233.0 210 62.4
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 2.4e-59 233.0 254 56.7
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 2.4e-59 233.0 246 57.3
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 3.2e-59 232.6 195 65.1
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 3.2e-59 232.6 185 69.7
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 4.1e-59 232.3 162 73.5
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 4.1e-59 232.3 201 68.7
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 5.4e-59 231.9 246 58.9
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 9.2e-59 231.1 246 56.5
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 1.2e-58 230.7 166 75.3
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 1.2e-58 230.7 220 63.2
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 1.2e-58 230.7 227 61.7
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 2.1e-58 229.9 203 65.0
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 2.1e-58 229.9 210 61.4
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 2.7e-58 229.6 250 56.0
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 3.5e-58 229.2 248 57.7
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 3.5e-58 229.2 210 63.3
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 3.5e-58 229.2 214 63.6
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 4.6e-58 228.8 250 56.0
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 4.6e-58 228.8 240 60.4
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 6.0e-58 228.4 246 56.1
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 6.0e-58 228.4 202 63.9
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 7.8e-58 228.0 247 55.5
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 7.8e-58 228.0 247 55.5
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 1.3e-57 227.3 193 63.2
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 1.3e-57 227.3 247 55.5
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 1.3e-57 227.3 252 58.7
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 1.7e-57 226.9 214 62.1
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 1.7e-57 226.9 214 62.1
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 1.7e-57 226.9 214 62.1
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 3.0e-57 226.1 249 55.0
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 3.0e-57 226.1 222 62.2
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 3.0e-57 226.1 244 58.2
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 3.9e-57 225.7 203 64.5
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 3.9e-57 225.7 212 64.2
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 3.9e-57 225.7 241 59.3
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 5.1e-57 225.3 182 68.1
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 5.1e-57 225.3 210 61.0
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 6.6e-57 224.9 258 57.8
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 8.6e-57 224.6 204 64.7
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 1.5e-56 223.8 250 57.2
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 5.6e-56 221.9 190 65.8
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 9.5e-56 221.1 233 56.7
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 1.6e-55 220.3 228 57.5
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 2.1e-55 219.9 235 56.6
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 2.3e-54 216.5 243 56.4
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 5.2e-54 215.3 239 55.6
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 5.8e-53 211.8 242 57.0
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 1.3e-52 210.7 207 58.5
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 3.7e-52 209.1 232 56.5
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 7.1e-51 204.9 285 49.5
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 1.2e-50 204.1 136 75.7
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 8.6e-49 198.0 244 52.9
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 1.5e-48 197.2 163 64.4
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 3.3e-48 196.1 163 63.8
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 5.6e-48 195.3 208 57.2
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 2.8e-47 193.0 130 76.9
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 3.6e-47 192.6 148 65.5
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 6.2e-47 191.8 134 75.4
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 1.8e-46 190.3 209 56.0
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 6.8e-46 188.3 117 80.3
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 1.5e-45 187.2 174 62.6
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 5.8e-45 185.3 128 73.4
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 9.9e-45 184.5 210 55.2
Atru.chr12.1246 Acer truncatum HOM05D005878 ORTHO05D007433 1.1e-43 181.0 236 54.7
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 4.6e-42 175.6 160 56.2
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 3.0e-41 172.9 170 54.7
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 2.8e-39 166.4 130 69.2
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 4.8e-39 165.6 206 51.0
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 4.8e-39 165.6 205 50.2
Psat5g223120 Pisum sativum HOM05D005878 ORTHO05D007433 4.8e-39 165.6 196 55.1
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 6.2e-39 165.2 139 63.3
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 4.4e-37 159.1 248 43.1
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 3.2e-35 152.9 189 48.7
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 1.3e-25 120.9 111 57.7
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 6.7e-25 118.6 115 57.4
TAR628G0990 Trochodendron aralioides HOM05D005878 ORTHO05D007433 1.1e-24 117.9 179 45.8
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 1.9e-24 117.1 161 46.0
Atru.chr2.3038 Acer truncatum HOM05D005878 ORTHO05D007433 1.7e-20 104.0 100 60.0
CBR_g50344 Chara braunii HOM05D005878 ORTHO05D007433 2.7e-18 96.7 219 36.1
Atru.chr3.2623 Acer truncatum HOM05D005878 ORTHO05D007433 4.3e-16 89.4 83 62.7
Atru.chr7.1915 Acer truncatum HOM05D005878 ORTHO05D007433 4.3e-16 89.4 122 45.9
PGSC0003DMG400040390 Solanum tuberosum HOM05D005878 ORTHO05D007433 1.4e-14 84.3 93 61.3
Potri.001G032200 Populus trichocarpa HOM05D005878 ORTHO05D007433 1.4e-11 74.3 240 35.0
BolC7t45992H Brassica oleracea HOM05D005878 ORTHO05D033170 1.4e-06 57.8 52 73.1
C07p55210 Brassica napus HOM05D005878 ORTHO05D033170 2.4e-06 57.0 108 42.6


User provided reference genes

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