Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004158g0040 Nicotiana tabacum HOM05D004825 ORTHO05D005415 1.1e-136 490.0 248 100.0
Nitab4.5_0000167g0020 Nicotiana tabacum HOM05D004825 ORTHO05D005415 5.1e-126 454.5 239 96.2
CAN.G1086.4 Capsicum annuum HOM05D004825 ORTHO05D005415 5.9e-106 387.9 237 82.3
Sopen11g009760 Solanum pennellii HOM05D004825 ORTHO05D005415 4.0e-102 375.2 265 74.0
Solyc11g018740.3 Solanum lycopersicum HOM05D004825 ORTHO05D005415 3.7e-100 368.6 265 72.8
Peaxi162Scf01013g00123 Petunia axillaris HOM05D004825 ORTHO05D005415 1.0e-89 334.0 237 74.3
Dinv09864 Davidia involucrata HOM05D004825 ORTHO05D005415 3.3e-80 302.4 246 61.8
QL02p047766 Quercus lobata HOM05D004825 ORTHO05D005415 2.4e-75 286.2 238 61.3
CiPaw.07G074800 Carya illinoinensis HOM05D004825 ORTHO05D005415 9.2e-75 284.3 246 61.0
CsaV3_2G010380 Cucumis sativus L. HOM05D004825 ORTHO05D005415 9.2e-75 284.3 237 60.3
MELO3C008585.2 Cucumis melo HOM05D004825 ORTHO05D005415 2.1e-74 283.1 237 60.8
RcHm_v2.0_Chr3g0448251 Rosa chinensis HOM05D004825 ORTHO05D005415 2.7e-74 282.7 246 59.3
Cfa006284 Carpinus fangiana HOM05D004825 ORTHO05D005415 6.0e-74 281.6 237 58.2
Solyc11g013080.3 Solanum lycopersicum HOM05D004825 ORTHO05D005415 5.1e-73 278.5 163 84.0
Thecc.05G205800 Theobroma cacao HOM05D004825 ORTHO05D005415 5.6e-72 275.0 246 58.1
FAN14G5305 Fragaria x ananassa HOM05D004825 ORTHO05D005415 4.7e-71 271.9 247 57.5
Oeu023621.1 Olea europaea HOM05D004825 ORTHO05D005415 8.1e-71 271.2 239 59.4
Sed0020944 Sechium edule HOM05D004825 ORTHO05D005415 8.1e-71 271.2 238 58.8
FvH4_6g00770 Fragaria vesca HOM05D004825 ORTHO05D005415 5.2e-70 268.5 247 57.1
Prupe.6G359000 Prunus persica HOM05D004825 ORTHO05D005415 6.8e-70 268.1 248 56.0
FAN05G3281 Fragaria x ananassa HOM05D004825 ORTHO05D005415 1.5e-69 266.9 247 56.7
FAN02G3908 Fragaria x ananassa HOM05D004825 ORTHO05D005415 3.4e-69 265.8 247 55.9
Manes.09G184100 Manihot esculenta HOM05D004825 ORTHO05D005415 3.4e-69 265.8 248 54.0
Actinidia06813 Actinidia chinensis HOM05D004825 ORTHO05D005415 7.5e-69 264.6 237 56.1
FAN09G1822 Fragaria x ananassa HOM05D004825 ORTHO05D005415 9.9e-69 264.2 247 55.5
vmacro12851 Vaccinium macrocarpon HOM05D004825 ORTHO05D005415 9.9e-69 264.2 236 57.6
TWI59G0982 Tripterygium wilfordii HOM05D004825 ORTHO05D005415 1.7e-68 263.5 242 56.6
Duzib128G0048 Durio zibethinus HOM05D004825 ORTHO05D005415 1.9e-67 260.0 246 56.1
Hma1.2p1_0220F.1_g093020 Hydrangea macrophylla HOM05D004825 ORTHO05D005415 1.9e-67 260.0 247 54.7
MD12G1258300 Malus domestica HOM05D004825 ORTHO05D005415 9.2e-67 257.7 240 57.1
Potri.013G087950 Populus trichocarpa HOM05D004825 ORTHO05D005415 1.6e-66 256.9 246 53.7
Atru.chr12.2135 Acer truncatum HOM05D004825 ORTHO05D005415 7.8e-66 254.6 246 53.7
Gohir.A09G053766 Gossypium hirsutum HOM05D004825 ORTHO05D005415 3.9e-65 252.3 246 54.1
Gohir.D09G053068 Gossypium hirsutum HOM05D004825 ORTHO05D005415 6.6e-65 251.5 246 54.1
Cc09_g03390 Coffea canephora HOM05D004825 ORTHO05D005415 2.5e-64 249.6 241 57.3
Rhsim10G0138100 Rhododendron simsii HOM05D004825 ORTHO05D005415 4.3e-64 248.8 247 55.5
GSVIVG01019145001 Vitis vinifera HOM05D004825 ORTHO05D005415 4.3e-64 248.8 271 50.2
Ciclev10007912m.g Citrus clementina HOM05D004825 ORTHO05D005415 5.6e-64 248.4 246 53.3
Gorai.006G054700 Gossypium raimondii HOM05D004825 ORTHO05D005415 5.6e-64 248.4 246 54.5
TAR374G0592 Trochodendron aralioides HOM05D004825 ORTHO05D005415 7.3e-64 248.1 232 56.5
ClCG11G007410 Citrullus lanatus HOM05D004825 ORTHO05D005415 1.2e-63 247.3 244 55.7
Sabra13G0069900 Salix brachista HOM05D004825 ORTHO05D005415 1.2e-63 247.3 246 52.8
Sc06g0005090 Simmondsia chinensis HOM05D004825 ORTHO05D005415 6.2e-63 245.0 247 54.7
Migut.I01185 Erythranthe guttata HOM05D004825 ORTHO05D005415 4.0e-62 242.3 234 53.0
Haze_04525 Corylus avellana HOM05D004825 ORTHO05D005415 7.6e-61 238.0 237 52.7
RcHm_v2.0_Chr3g0448211 Rosa chinensis HOM05D004825 ORTHO05D005415 6.4e-60 235.0 224 53.1
HanXRQChr01g0025761 Helianthus annuus HOM05D004825 ORTHO05D005415 1.1e-59 234.2 237 53.2
Nn3g16227 Nelumbo nucifera HOM05D004825 ORTHO05D005415 1.1e-59 234.2 230 54.8
THA.LOC104814783 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 5.4e-59 231.9 221 53.8
BcaB01g01166 Brassica carinata HOM05D004825 ORTHO05D005415 1.6e-58 230.3 229 54.1
A06p22020 Brassica napus HOM05D004825 ORTHO05D005415 2.1e-58 229.9 230 53.0
DCAR_003341 Daucus carota HOM05D004825 ORTHO05D005415 2.7e-58 229.6 246 51.6
Lalb_Chr19g0126781 Lupinus albus HOM05D004825 ORTHO05D005415 2.7e-58 229.6 267 47.9
AT3G44370 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 3.5e-58 229.2 237 51.9
BcaC01g02045 Brassica carinata HOM05D004825 ORTHO05D005415 3.5e-58 229.2 230 52.6
C03p69210 Brassica napus HOM05D004825 ORTHO05D005415 3.5e-58 229.2 230 52.6
BolC3t19174H Brassica oleracea HOM05D004825 ORTHO05D005415 3.5e-58 229.2 230 52.6
BraA06t25290Z Brassica rapa HOM05D004825 ORTHO05D005415 3.5e-58 229.2 230 53.0
MSTRG.10886 Avicennia marina HOM05D004825 ORTHO05D005415 2.3e-57 226.5 244 52.0
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 3.9e-57 225.7 224 53.1
CANSAT54G0263 Cannabis sativa HOM05D004825 ORTHO05D005415 3.9e-57 225.7 264 48.5
ECA233G4148 Erigeron canadensis HOM05D004825 ORTHO05D005415 3.9e-57 225.7 237 51.1
Thhalv10010266m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 5.1e-57 225.3 224 53.1
AL5G22510 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 6.6e-57 224.9 230 52.6
AL5G22530 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 6.6e-57 224.9 230 52.6
COL.COLO4_07810 Corchorus olitorius HOM05D004825 ORTHO05D005415 1.5e-56 223.8 189 57.1
Lj1g0016449 Lotus japonicus HOM05D004825 ORTHO05D005415 1.5e-56 223.8 264 46.2
Glyma.18G240200 Glycine max HOM05D004825 ORTHO05D005415 1.9e-56 223.4 262 45.8
AT1G65080 Arabidopsis thaliana HOM05D004825 ORTHO05D005415 2.5e-56 223.0 245 48.6
Sp5g16820 Schrenkiella parvula HOM05D004825 ORTHO05D005415 2.5e-56 223.0 230 51.3
Carub.0005s1010 Capsella rubella HOM05D004825 ORTHO05D005415 7.3e-56 221.5 237 50.6
CARHR104500 Cardamine hirsuta HOM05D004825 ORTHO05D005415 7.3e-56 221.5 231 51.5
SalBow6G3714 Salvia bowleyana HOM05D004825 ORTHO05D005415 9.6e-56 221.1 233 50.2
Psat3g104280 Pisum sativum HOM05D004825 ORTHO05D005415 2.8e-55 219.5 260 45.0
AL2G19720 Arabidopsis lyrata HOM05D004825 ORTHO05D005415 4.7e-55 218.8 245 48.6
Carub.0002s1042 Capsella rubella HOM05D004825 ORTHO05D005415 1.4e-54 217.2 246 47.2
Eucgr.B01387 Eucalyptus grandis HOM05D004825 ORTHO05D005415 3.1e-54 216.1 246 49.2
Thhalv10022463m.g Eutrema salsugineum HOM05D004825 ORTHO05D005415 4.0e-54 215.7 246 47.6
Phvul.008G056000 Phaseolus vulgaris HOM05D004825 ORTHO05D005415 5.3e-54 215.3 267 44.9
PSO478G4613 Papaver somniferum HOM05D004825 ORTHO05D005415 6.9e-54 214.9 232 50.4
Aqoxy1G01799 Aquilegia oxysepala HOM05D004825 ORTHO05D005415 9.0e-54 214.5 227 53.3
BcaC03g14674 Brassica carinata HOM05D004825 ORTHO05D005415 9.0e-54 214.5 247 47.8
A02p13010 Brassica napus HOM05D004825 ORTHO05D005415 9.0e-54 214.5 247 47.8
C02p21130 Brassica napus HOM05D004825 ORTHO05D005415 9.0e-54 214.5 247 47.8
BolC2t08253H Brassica oleracea HOM05D004825 ORTHO05D005415 9.0e-54 214.5 247 47.8
BraA02t06357Z Brassica rapa HOM05D004825 ORTHO05D005415 9.0e-54 214.5 247 47.8
Potri.009G121800 Populus trichocarpa HOM05D004825 ORTHO05D005415 9.0e-54 214.5 226 53.1
SGA_v2.0_scaffold122G33281 Striga asiatica HOM05D004825 ORTHO05D005415 3.4e-53 212.6 233 49.8
SalBow6G0845 Salvia bowleyana HOM05D004825 ORTHO05D005415 7.6e-53 211.5 235 50.2
Sp5g19610 Schrenkiella parvula HOM05D004825 ORTHO05D005415 7.6e-53 211.5 247 47.4
SpUn0108_0010 Schrenkiella parvula HOM05D004825 ORTHO05D005415 7.6e-53 211.5 247 47.4
Sabra09G0094100 Salix brachista HOM05D004825 ORTHO05D005415 9.9e-53 211.1 217 53.5
Lsat_1_v5_gn_8_2080 Lactuca sativa HOM05D004825 ORTHO05D005415 1.7e-52 210.3 238 47.9
PGR119G2407 Punica granatum HOM05D004825 ORTHO05D005415 6.4e-52 208.4 238 46.6
BcaB05g24081 Brassica carinata HOM05D004825 ORTHO05D005415 1.4e-51 207.2 247 46.6
Ca_07963_v3 Cicer arietinum L. HOM05D004825 ORTHO05D005415 1.9e-51 206.8 268 43.3
VMungo1383G1726 Vigna mungo HOM05D004825 ORTHO05D005415 3.2e-51 206.1 263 43.7
Hund07323 Selenicereus undatus HOM05D004825 ORTHO05D005415 4.2e-51 205.7 238 49.6
THA.LOC104805710 Tarenaya hassleriana HOM05D004825 ORTHO05D005415 1.2e-50 204.1 242 46.7
Medtr7g079500 Medicago truncatula HOM05D004825 ORTHO05D005415 1.6e-50 203.8 228 47.4
Aa31LG2G2270 Aethionema arabicum HOM05D004825 ORTHO05D005415 7.8e-50 201.4 248 44.4
TPR.G29414 Trifolium pratense HOM05D004825 ORTHO05D005415 7.8e-50 201.4 263 43.0
arahy.Tifrunner.gnm1.ann1.B3BVJM Arachis hypogaea HOM05D004825 ORTHO05D005415 2.3e-49 199.9 247 45.3
PGR119G0192 Punica granatum HOM05D004825 ORTHO05D005415 1.1e-48 197.6 232 49.1
Ah.06g195620 Amaranthus hybridus HOM05D004825 ORTHO05D005415 4.8e-47 192.2 237 45.1
PSO017G3896 Papaver somniferum HOM05D004825 ORTHO05D005415 1.1e-46 191.0 232 46.6
EL10Ac4g09418 Beta vulgaris HOM05D004825 ORTHO05D005415 1.4e-46 190.7 246 44.3
Sopen11g007800 Solanum pennellii HOM05D004825 ORTHO05D005415 2.6e-45 186.4 118 80.5
unitig_32.g11006 Utricularia gibba HOM05D004825 ORTHO05D005415 9.3e-43 177.9 181 48.6
CARHR056570 Cardamine hirsuta HOM05D004825 ORTHO05D005415 1.1e-40 171.0 172 51.2
AUR62000357 Chenopodium quinoa HOM05D004825 ORTHO05D005415 5.6e-40 168.7 252 40.9
arahy.Tifrunner.gnm1.ann1.T0KW2L Arachis hypogaea HOM05D004825 ORTHO05D005415 1.1e-38 164.5 247 40.5
AUR62006702 Chenopodium quinoa HOM05D004825 ORTHO05D005415 1.4e-38 164.1 248 39.9
PGSC0003DMG400018032 Solanum tuberosum HOM05D004825 ORTHO05D005415 6.4e-36 155.2 90 80.0
PGSC0003DMG401000916 Solanum tuberosum HOM05D004825 ORTHO05D005415 5.5e-35 152.1 87 82.8
HPP92_007971 Vanilla planifolia HOM05D004825 ORTHO05D005415 1.3e-33 147.5 231 37.7
PGSC0003DMG400014032 Solanum tuberosum HOM05D004825 ORTHO05D005415 2.3e-33 146.7 87 80.5
CDE02G0647 Ceratophyllum demersum HOM05D004825 ORTHO05D005415 1.6e-31 140.6 218 39.4
Zm00001eb375410 Zea mays HOM05D004825 ORTHO05D005415 6.5e-28 128.6 255 33.3
Nitab4.5_0000188g0370 Nicotiana tabacum HOM05D004825 ORTHO05D005415 5.5e-27 125.6 125 58.4
Cpa.g.c33279 Carica papaya HOM05D004825 ORTHO05D005415 3.5e-26 122.9 89 61.8
ATR0582G066 Amborella trichopoda HOM05D004825 ORTHO05D005415 6.1e-26 122.1 226 34.1
MD12G1258500 Malus domestica HOM05D004825 ORTHO05D005415 1.5e-24 117.5 148 45.3
SEGI_16462 Sequoiadendron giganteum HOM05D004825 ORTHO05D005415 8.2e-23 111.7 183 35.0
Cpa.g.sc18.189 Carica papaya HOM05D004825 ORTHO05D005415 5.0e-20 102.4 119 48.7
SGA_v2.0_scaffold71G24001 Striga asiatica HOM05D004825 ORTHO05D005415 1.8e-14 84.0 208 32.7
Glyma.09G252466 Glycine max HOM05D004825 ORTHO05D005415 3.2e-11 73.2 71 53.5
Mapoly0072s0017 Marchantia polymorpha HOM05D004825 ORTHO05D005415 3.6e-10 69.7 220 25.0


User provided reference genes

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