Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004137g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 7.0e-56 220.3 107 100.0
Peaxi162Scf00080g00520 Petunia axillaris HOM05D008037 ORTHO05D004271 7.8e-31 137.1 87 80.5
Manes.07G046200 Manihot esculenta HOM05D008037 ORTHO05D004271 6.0e-23 110.9 76 73.7
MD00G1140100 Malus domestica HOM05D008016 ORTHO05D004271 8.7e-22 107.1 112 56.2
Nitab4.5_0001986g0120 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.4e-19 99.0 59 83.1
BcaC05g27379 Brassica carinata HOM05D008016 ORTHO05D021751 2.2e-17 92.4 67 74.6
Nitab4.5_0005831g0110 Nicotiana tabacum HOM05D008016 ORTHO05D011667 6.0e-15 84.3 62 71.0
BolSC45t60899H Brassica oleracea HOM05D008016 ORTHO05D004271 1.8e-14 82.8 55 76.4
Nitab4.5_0012234g0010 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.0e-14 82.0 59 66.1
Gohir.A02G134102 Gossypium hirsutum HOM05D008016 ORTHO05D004271 2.5e-13 79.0 70 61.4
Nitab4.5_0007400g0090 Nicotiana tabacum HOM05D008016 ORTHO05D004271 3.3e-13 78.6 46 80.4
Nitab4.5_0001727g0130 Nicotiana tabacum HOM05D008037 ORTHO05D004271 5.6e-13 77.8 64 67.2
Nitab4.5_0008665g0060 Nicotiana tabacum HOM05D008037 ORTHO05D004271 9.6e-13 77.0 47 85.1
Gohir.1Z049482 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.6e-12 76.3 45 82.2
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 2.1e-12 75.9 63 66.7
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 2.1e-12 75.9 45 82.2
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 2.1e-12 75.9 45 82.2
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 2.1e-12 75.9 45 82.2
SHI29144 Sapria himalayana HOM05D000002 ORTHO05D004271 2.8e-12 75.5 53 73.6
Nitab4.5_0000066g0170 Nicotiana tabacum HOM05D008037 ORTHO05D004271 4.8e-12 74.7 41 87.8
Zm00001eb441600 Zea mays HOM05D008037 ORTHO05D004271 6.2e-12 74.3 91 52.7
MBI08_g48225_MAGBIO Magnolia biondii HOM05D008037 ORTHO05D004271 1.1e-11 73.6 63 65.1
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 9.0e-11 70.5 60 66.7
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 9.0e-11 70.5 60 66.7
arahy.Tifrunner.gnm1.ann1.ASR258 Arachis hypogaea HOM05D008037 ORTHO05D004271 5.8e-10 67.8 60 65.0
EL10As10g23963 Beta vulgaris HOM05D008037 ORTHO05D004271 7.6e-10 67.4 57 66.7
Nitab4.5_0001170g0110 Nicotiana tabacum HOM05D008016 ORTHO05D004271 7.6e-10 67.4 41 78.0
Nitab4.5_0000002g0310 Nicotiana tabacum HOM05D010190 ORTHO05D004271 1.0e-09 67.0 48 68.8
arahy.Tifrunner.gnm1.ann1.54SFA9 Arachis hypogaea HOM05D008037 ORTHO05D004271 2.9e-09 65.5 35 88.6
EL10Ac6g13942 Beta vulgaris HOM05D008037 ORTHO05D004271 2.9e-09 65.5 34 91.2
Nitab4.5_0006502g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.8e-09 65.1 60 63.3
Hund25912 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund27633 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund27757 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund27833 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund28332 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund28440 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund28538 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund28614 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund28956 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund28981 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund29028 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund29091 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund29181 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund29249 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund29256 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund29263 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund29290 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund29318 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund29436 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund29853 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund30002 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund30263 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund30448 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund30632 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Hund30993 Selenicereus undatus HOM05D008037 ORTHO05D004271 3.8e-09 65.1 57 64.9
Gohir.1Z049580 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.1e-08 63.5 35 85.7
RcHm_v2.0_Chr4g0392721 Rosa chinensis HOM05D008016 ORTHO05D004271 2.5e-08 62.4 40 75.0
Solyc03g150125.1 Solanum lycopersicum HOM05D010190 ORTHO05D004271 2.5e-08 62.4 84 44.0
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 5.5e-08 61.2 60 61.7
Gohir.D07G151450 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.2e-07 60.1 36 80.6
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 1.6e-07 59.7 66 50.0
Phvul.009G203800 Phaseolus vulgaris HOM05D008037 ORTHO05D004271 2.1e-07 59.3 31 90.3
VMungo1233G0001 Vigna mungo HOM05D001966 ORTHO05D010986 6.0e-07 57.8 55 54.5
Zm00001eb129280 Zea mays HOM05D034373 ORTHO05D021180 2.3e-06 55.8 76 46.1
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 6.7e-06 54.3 58 55.2
EL10Ac9g22450 Beta vulgaris HOM05D008037 ORTHO05D004271 8.7e-06 53.9 29 86.2


User provided reference genes

Program Settings