Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004137g0030 Nicotiana tabacum HOM05D008354 ORTHO05D010055 4.0e-69 264.6 130 100.0
Nitab4.5_0012234g0020 Nicotiana tabacum HOM05D008016 ORTHO05D010055 2.9e-43 178.7 149 67.8
Nitab4.5_0001727g0120 Nicotiana tabacum HOM05D008016 ORTHO05D010055 3.7e-35 151.8 128 67.2
Nitab4.5_0003101g0110 Nicotiana tabacum HOM05D008354 ORTHO05D010055 1.4e-29 133.3 106 67.9
Nitab4.5_0008665g0040 Nicotiana tabacum HOM05D001070 ORTHO05D002096 1.4e-29 133.3 106 69.8
vmacro22417 Vaccinium macrocarpon HOM05D008354 ORTHO05D010055 8.9e-29 130.6 104 69.2
CAN.G386.21 Capsicum annuum HOM05D001966 ORTHO05D010055 7.5e-28 127.5 91 76.9
Nitab4.5_0004841g0090 Nicotiana tabacum HOM05D008354 ORTHO05D010055 1.7e-27 126.3 88 77.3
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.9e-24 115.2 111 60.4
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 1.1e-23 113.6 106 64.2
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 1.6e-22 109.8 106 61.3
Nitab4.5_0005831g0030 Nicotiana tabacum HOM05D001090 ORTHO05D006167 2.1e-22 109.4 62 85.5
Nitab4.5_0006502g0020 Nicotiana tabacum HOM05D001966 ORTHO05D010055 1.1e-21 107.1 119 56.3
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 4.0e-21 105.1 106 60.4
Thhalv10029308m.g Eutrema salsugineum HOM05D008354 ORTHO05D010055 1.2e-20 103.6 113 54.0
Nitab4.5_0001249g0070 Nicotiana tabacum HOM05D008016 ORTHO05D010588 1.5e-20 103.2 63 79.4
Peaxi162Scf00687g00611 Petunia axillaris HOM05D001966 ORTHO05D010055 9.9e-20 100.5 120 50.8
PGSC0003DMG400029000 Solanum tuberosum HOM05D008354 ORTHO05D010055 2.2e-19 99.4 55 92.7
PGSC0003DMG401008784 Solanum tuberosum HOM05D008354 ORTHO05D010055 2.2e-19 99.4 55 92.7
Nitab4.5_0002404g0010 Nicotiana tabacum HOM05D008354 ORTHO05D010055 1.1e-18 97.1 55 90.9
Migut.D01398 Erythranthe guttata HOM05D008354 ORTHO05D010055 1.9e-18 96.3 55 90.9
Lsat_1_v5_gn_2_20541 Lactuca sativa HOM05D008354 ORTHO05D010055 3.2e-18 95.5 55 89.1
Lsat_1_v5_gn_3_108780 Lactuca sativa HOM05D008354 ORTHO05D010055 3.2e-18 95.5 57 86.0
Lsat_1_v5_gn_3_110420 Lactuca sativa HOM05D008354 ORTHO05D010055 3.2e-18 95.5 55 89.1
Lsat_1_v5_gn_4_147820 Lactuca sativa HOM05D008354 ORTHO05D010055 3.2e-18 95.5 55 89.1
Lsat_1_v5_gn_5_181860 Lactuca sativa HOM05D008354 ORTHO05D010055 3.2e-18 95.5 55 89.1
C02p28730 Brassica napus HOM05D008016 ORTHO05D010588 7.1e-18 94.4 51 88.2
EL10As10g23964 Beta vulgaris HOM05D001966 ORTHO05D010055 1.2e-17 93.6 121 50.4
Potri.013G092500 Populus trichocarpa HOM05D008354 ORTHO05D010055 4.6e-17 91.7 55 85.5
CAN.G947.16 Capsicum annuum HOM05D001697 ORTHO05D001905 7.8e-17 90.9 52 90.4
DCAR_024575 Daucus carota HOM05D008354 ORTHO05D010055 6.6e-16 87.8 52 86.5
DCAR_031655 Daucus carota HOM05D008354 ORTHO05D010055 6.6e-16 87.8 52 86.5
ClCG11G009640 Citrullus lanatus HOM05D008354 ORTHO05D010055 8.7e-16 87.4 51 88.2
MELO3C028020.2 Cucumis melo HOM05D008354 ORTHO05D010055 8.7e-16 87.4 51 88.2
CsaV3_UNG196490 Cucumis sativus L. HOM05D008016 ORTHO05D010588 8.7e-16 87.4 72 62.5
Aqoxy38s013 Aquilegia oxysepala HOM05D008354 ORTHO05D010055 1.1e-15 87.0 55 83.6
BNapus_Darmor_BZH_scaffold_69p00020 Brassica napus HOM05D008016 ORTHO05D010588 1.9e-15 86.3 41 92.7
CARHR282370 Cardamine hirsuta HOM05D008016 ORTHO05D010588 1.9e-15 86.3 41 92.7
BolSC29t60497H Brassica oleracea HOM05D008016 ORTHO05D010588 2.5e-15 85.9 40 92.5
BolSC29t60557H Brassica oleracea HOM05D008016 ORTHO05D010588 2.5e-15 85.9 40 92.5
BolSC29t60625H Brassica oleracea HOM05D008016 ORTHO05D010588 2.5e-15 85.9 40 92.5
BolSC35t60682H Brassica oleracea HOM05D008016 ORTHO05D010588 2.5e-15 85.9 40 92.5
BolSC44t60813H Brassica oleracea HOM05D008016 ORTHO05D010588 2.5e-15 85.9 40 92.5
BolSC46t60968H Brassica oleracea HOM05D008016 ORTHO05D010588 2.5e-15 85.9 40 92.5
BraSC103t45418Z Brassica rapa HOM05D008016 ORTHO05D010588 2.5e-15 85.9 40 92.5
BraSC25t45901Z Brassica rapa HOM05D008016 ORTHO05D010588 2.5e-15 85.9 40 92.5
BraSC25t45922Z Brassica rapa HOM05D008016 ORTHO05D010588 2.5e-15 85.9 40 92.5
Nitab4.5_0005831g0120 Nicotiana tabacum HOM05D008354 ORTHO05D010055 4.3e-15 85.1 50 86.0
MELO3C000043.2 Cucumis melo HOM05D008354 ORTHO05D010055 9.6e-15 84.0 51 86.3
BolSC45t60920H Brassica oleracea HOM05D008016 ORTHO05D010588 3.6e-14 82.0 38 92.1
CAN.G100.35 Capsicum annuum HOM05D008016 ORTHO05D010588 6.2e-14 81.3 65 58.5
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 1.4e-13 80.1 59 71.2
Lsat_1_v5_gn_4_68181 Lactuca sativa HOM05D008016 ORTHO05D010055 5.3e-13 78.2 124 46.8
arahy.Tifrunner.gnm1.ann1.V91BB6 Arachis hypogaea HOM05D008354 ORTHO05D010055 9.0e-13 77.4 55 74.5
LjContig00489g0002748 Lotus japonicus HOM05D008354 ORTHO05D010055 4.4e-12 75.1 55 76.4
arahy.Tifrunner.gnm1.ann1.CV8HTS Arachis hypogaea HOM05D008354 ORTHO05D010055 5.8e-12 74.7 71 60.6
LjContig00315g0013064 Lotus japonicus HOM05D008354 ORTHO05D010055 7.6e-12 74.3 56 73.2
LjContig00439g0006222 Lotus japonicus HOM05D008354 ORTHO05D010055 7.6e-12 74.3 56 73.2
LjContig00446g0002728 Lotus japonicus HOM05D008354 ORTHO05D010055 7.6e-12 74.3 56 73.2
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 1.3e-11 73.6 34 94.1
Lsat_1_v5_gn_4_147840 Lactuca sativa HOM05D008016 ORTHO05D010588 1.3e-11 73.6 34 94.1
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 1.3e-11 73.6 34 94.1
Gohir.A03G019700 Gossypium hirsutum HOM05D008354 ORTHO05D010055 2.9e-11 72.4 58 70.7
Gohir.D08G104600 Gossypium hirsutum HOM05D008354 ORTHO05D010055 6.4e-11 71.2 58 69.0
arahy.Tifrunner.gnm1.ann1.FTZ997 Arachis hypogaea HOM05D000445 ORTHO05D000314 1.4e-10 70.1 42 81.0
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.9e-10 69.7 109 44.0
Lalb_Chr17g0346961 Lupinus albus HOM05D008016 ORTHO05D010588 1.9e-10 69.7 44 77.3
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 3.2e-10 68.9 89 48.3
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 4.2e-10 68.6 59 64.4
MELO3C031262.2 Cucumis melo HOM05D008354 ORTHO05D010055 1.2e-09 67.0 44 79.5
Oeu040832.1 Olea europaea HOM05D008354 ORTHO05D010055 1.2e-09 67.0 47 76.6
BolSC49t61132H Brassica oleracea HOM05D001966 ORTHO05D010986 2.1e-09 66.2 36 86.1
Gohir.A07G174583 Gossypium hirsutum HOM05D008354 ORTHO05D010055 2.1e-09 66.2 58 65.5
Gohir.D12G080900 Gossypium hirsutum HOM05D008354 ORTHO05D010055 2.1e-09 66.2 58 67.2
Peaxi162Scf00080g00519 Petunia axillaris HOM05D001966 ORTHO05D010055 2.1e-09 66.2 89 48.3
Glyma.14G158500 Glycine max HOM05D008354 ORTHO05D010055 7.8e-09 64.3 42 78.6
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 1.3e-08 63.5 51 64.7
Gohir.D02G108601 Gossypium hirsutum HOM05D008354 ORTHO05D010055 1.7e-08 63.2 57 63.2
EL10Ac7g17031 Beta vulgaris HOM05D008354 ORTHO05D010055 2.3e-08 62.8 49 69.4
Sed0021589 Sechium edule HOM05D008016 ORTHO05D004271 2.3e-08 62.8 39 79.5
Sc02g0004570 Simmondsia chinensis HOM05D008037 ORTHO05D004271 2.3e-08 62.8 66 53.0
vmacro22395 Vaccinium macrocarpon HOM05D008016 ORTHO05D004271 8.7e-08 60.8 56 58.9
vmacro22420 Vaccinium macrocarpon HOM05D008016 ORTHO05D010055 8.7e-08 60.8 56 58.9
Psat7g058040 Pisum sativum HOM05D008354 ORTHO05D010055 1.9e-07 59.7 44 75.0
EL10Ac6g14592 Beta vulgaris HOM05D008354 ORTHO05D010055 3.3e-07 58.9 54 63.0
CAN.G82.6 Capsicum annuum HOM05D000011 ORTHO05D000018 3.3e-07 58.9 35 80.0
Gohir.D11G276000 Gossypium hirsutum HOM05D008354 ORTHO05D010055 3.3e-07 58.9 58 63.8
Glyma.03G170700 Glycine max HOM05D008354 ORTHO05D010055 4.3e-07 58.5 55 63.6
Psat5g119000 Pisum sativum HOM05D009726 ORTHO05D010588 9.6e-07 57.4 59 55.9
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 9.6e-07 57.4 67 47.8
CAN.G1298.21 Capsicum annuum HOM05D000445 ORTHO05D000314 1.6e-06 56.6 57 56.1
Gohir.D10G128050 Gossypium hirsutum HOM05D008354 ORTHO05D010055 1.6e-06 56.6 57 61.4
BolSC29t60538H Brassica oleracea HOM05D008016 ORTHO05D010986 2.8e-06 55.8 25 92.0
vmacro12501 Vaccinium macrocarpon HOM05D001824 ORTHO05D010055 2.8e-06 55.8 33 81.8
Solyc11g021160.1 Solanum lycopersicum HOM05D001966 ORTHO05D010055 4.8e-06 55.1 44 63.6
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 4.8e-06 55.1 48 58.3
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 6.2e-06 54.7 24 95.8
arahy.Tifrunner.gnm1.ann1.VZYH4A Arachis hypogaea HOM05D008016 ORTHO05D010588 6.2e-06 54.7 24 95.8
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 6.2e-06 54.7 24 95.8
arahy.Tifrunner.gnm1.ann1.ZMH4QB Arachis hypogaea HOM05D001966 ORTHO05D010986 6.2e-06 54.7 24 95.8
arahy.Tifrunner.gnm1.ann1.ZHN7AL Arachis hypogaea HOM05D001966 ORTHO05D007227 8.1e-06 54.3 24 91.7
Migut.D01380 Erythranthe guttata HOM05D008354 ORTHO05D010055 8.1e-06 54.3 54 55.6
Nitab4.5_0007400g0100 Nicotiana tabacum HOM05D008016 ORTHO05D004271 8.1e-06 54.3 30 80.0


User provided reference genes

Program Settings