Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004131g0070 Nicotiana tabacum HOM05D001798 ORTHO05D005040 8.3e-79 297.0 150 100.0
Nitab4.5_0004131g0060 Nicotiana tabacum HOM05D001798 ORTHO05D005040 3.1e-49 198.7 116 87.9
PGSC0003DMG400026318 Solanum tuberosum HOM05D001798 ORTHO05D005040 3.4e-40 168.7 131 70.2
Solyc11g008600.1 Solanum lycopersicum HOM05D001798 ORTHO05D005040 9.3e-14 80.9 132 45.5
CAN.G321.14 Capsicum annuum HOM05D001798 ORTHO05D005040 1.2e-13 80.5 137 41.6
Sopen11g004390 Solanum pennellii HOM05D001798 ORTHO05D005040 1.2e-13 80.5 132 44.7
Prupe.1G087800 Prunus persica HOM05D001798 ORTHO05D005040 2.7e-13 79.3 136 39.7
PGSC0003DMG400016261 Solanum tuberosum HOM05D001798 ORTHO05D005040 4.6e-13 78.6 139 43.2
FAN22G0641 Fragaria x ananassa HOM05D001798 ORTHO05D005040 1.0e-12 77.4 142 38.7
MD12G1161200 Malus domestica HOM05D001798 ORTHO05D005040 1.8e-12 76.6 136 39.0
Peaxi162Scf00296g00124 Petunia axillaris HOM05D001798 ORTHO05D005040 1.8e-12 76.6 136 40.4
FvH4_4g09360 Fragaria vesca HOM05D001798 ORTHO05D005040 2.3e-12 76.3 137 38.0
MBI16_g35923_MAGBIO Magnolia biondii HOM05D001798 ORTHO05D005040 3.9e-12 75.5 130 41.5
FvH4_3g45900 Fragaria vesca HOM05D001798 ORTHO05D005040 5.1e-12 75.1 134 38.1
MD13G1257600 Malus domestica HOM05D001798 ORTHO05D005040 1.1e-11 73.9 138 39.9
RcHm_v2.0_Chr4g0402691 Rosa chinensis HOM05D001798 ORTHO05D005040 1.1e-11 73.9 134 39.6
RcHm_v2.0_Chr4g0402701 Rosa chinensis HOM05D001798 ORTHO05D005040 1.1e-11 73.9 131 38.2
Dinv41255 Davidia involucrata HOM05D001798 ORTHO05D004054 1.5e-11 73.6 130 39.2
COL.COLO4_36848 Corchorus olitorius HOM05D001798 ORTHO05D005040 1.9e-11 73.2 134 38.8
MBI16_g35927_MAGBIO Magnolia biondii HOM05D000772 ORTHO05D005040 1.9e-11 73.2 125 43.2
CiPaw.07G191500 Carya illinoinensis HOM05D001798 ORTHO05D005040 5.7e-11 71.6 140 36.4
Manes.16G135500 Manihot esculenta HOM05D001798 ORTHO05D005040 9.7e-11 70.9 128 39.1
Prupe.1G460000 Prunus persica HOM05D001798 ORTHO05D005040 9.7e-11 70.9 131 37.4
QL12p025154 Quercus lobata HOM05D001798 ORTHO05D005040 9.7e-11 70.9 129 41.9
Atru.chr7.2645 Acer truncatum HOM05D001798 ORTHO05D005040 1.7e-10 70.1 135 37.0
MBI16_g35924_MAGBIO Magnolia biondii HOM05D001798 ORTHO05D005040 1.7e-10 70.1 131 38.9
Duzib170G0014 Durio zibethinus HOM05D001798 ORTHO05D005040 2.2e-10 69.7 132 35.6
Hma1.2p1_1646F.1_g295510 Hydrangea macrophylla HOM05D001798 ORTHO05D005040 2.2e-10 69.7 138 36.2
Hma1.2p1_2478F.1_g322950 Hydrangea macrophylla HOM05D001798 ORTHO05D005040 2.8e-10 69.3 138 35.5
CiPaw.08G019800 Carya illinoinensis HOM05D001798 ORTHO05D005040 3.7e-10 68.9 130 41.5
Gohir.D06G107900 Gossypium hirsutum HOM05D001798 ORTHO05D005040 3.7e-10 68.9 136 36.0
Nitab4.5_0000555g0220 Nicotiana tabacum HOM05D008707 ORTHO05D005040 3.7e-10 68.9 55 69.1
Potri.006G273500 Populus trichocarpa HOM05D001798 ORTHO05D005040 3.7e-10 68.9 131 37.4
Potri.006G273566 Populus trichocarpa HOM05D001798 ORTHO05D005040 3.7e-10 68.9 131 37.4
Cpa.g.sc23.17 Carica papaya HOM05D001798 ORTHO05D005040 4.8e-10 68.6 126 38.1
Potri.018G094100 Populus trichocarpa HOM05D001798 ORTHO05D005040 4.8e-10 68.6 134 38.1
COL.COLO4_19032 Corchorus olitorius HOM05D001798 ORTHO05D005040 1.1e-09 67.4 137 37.2
Potri.018G006800 Populus trichocarpa HOM05D001798 ORTHO05D005040 1.1e-09 67.4 132 38.6
TAR383G0769 Trochodendron aralioides HOM05D001798 ORTHO05D005040 1.1e-09 67.4 130 37.7
Thecc.09G171700 Theobroma cacao HOM05D001798 ORTHO05D005040 1.4e-09 67.0 133 35.3
Gohir.A08G085900 Gossypium hirsutum HOM05D001798 ORTHO05D005040 1.8e-09 66.6 135 34.1
Gohir.D08G094900 Gossypium hirsutum HOM05D001798 ORTHO05D005040 1.8e-09 66.6 135 34.8
Gorai.004G100700 Gossypium raimondii HOM05D001798 ORTHO05D005040 1.8e-09 66.6 136 35.3
Duzib168G0008 Durio zibethinus HOM05D001798 ORTHO05D005040 2.4e-09 66.2 129 37.2
Lsat_1_v5_gn_8_67120 Lactuca sativa HOM05D001798 ORTHO05D005040 3.1e-09 65.9 148 35.1
Manes.03G004000 Manihot esculenta HOM05D001798 ORTHO05D005040 3.1e-09 65.9 118 38.1
MSTRG.19701 Avicennia marina HOM05D001798 ORTHO05D005040 5.3e-09 65.1 127 37.8
Cpa.g.sc95.60 Carica papaya HOM05D001798 ORTHO05D005040 5.3e-09 65.1 130 39.2
Gorai.010G122600 Gossypium raimondii HOM05D001798 ORTHO05D005040 5.3e-09 65.1 138 34.8
Manes.14G151300 Manihot esculenta HOM05D001798 ORTHO05D005040 5.3e-09 65.1 129 34.1
SGA_v2.0_scaffold12G06063 Striga asiatica HOM05D001798 ORTHO05D005040 5.3e-09 65.1 128 38.3
EL10Ac2g03758 Beta vulgaris HOM05D001798 ORTHO05D005040 9.1e-09 64.3 144 37.5
Gohir.A06G105500 Gossypium hirsutum HOM05D001798 ORTHO05D005040 9.1e-09 64.3 141 36.9
SalBow6G3226 Salvia bowleyana HOM05D001798 ORTHO05D005040 9.1e-09 64.3 127 36.2
SalBow6G3242 Salvia bowleyana HOM05D001798 ORTHO05D005040 9.1e-09 64.3 127 36.2
FvH4_2g36750 Fragaria vesca HOM05D001798 ORTHO05D005040 1.2e-08 63.9 130 34.6
SGA_v2.0_scaffold301G47805 Striga asiatica HOM05D000485 ORTHO05D005040 1.2e-08 63.9 128 38.3
CSS0007301 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 1.5e-08 63.5 137 34.3
Sabra06G0212200 Salix brachista HOM05D001798 ORTHO05D005040 1.5e-08 63.5 128 35.2
Aqoxy7G03082 Aquilegia oxysepala HOM05D001798 ORTHO05D005040 2.6e-08 62.8 131 35.1
AUR62020597 Chenopodium quinoa HOM05D001798 ORTHO05D005040 3.4e-08 62.4 149 36.9
CSS0005198 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 4.5e-08 62.0 127 38.6
CSS0011185 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 4.5e-08 62.0 127 38.6
FAN20G2332 Fragaria x ananassa HOM05D001798 ORTHO05D005040 4.5e-08 62.0 130 33.8
Eucgr.C00167 Eucalyptus grandis HOM05D001798 ORTHO05D005040 5.9e-08 61.6 127 36.2
Sabra06G0211900 Salix brachista HOM05D001798 ORTHO05D005040 5.9e-08 61.6 129 34.1
FAN27G0855 Fragaria x ananassa HOM05D001798 ORTHO05D005040 7.7e-08 61.2 130 33.8
Sabra18G0080900 Salix brachista HOM05D001798 ORTHO05D005040 7.7e-08 61.2 131 36.6
TWI34G0376 Tripterygium wilfordii HOM05D001798 ORTHO05D005040 7.7e-08 61.2 126 34.1
Ciclev10009891m.g Citrus clementina HOM05D001798 ORTHO05D005040 1.0e-07 60.8 120 34.2
Duzib150G1419 Durio zibethinus HOM05D001798 ORTHO05D005040 1.0e-07 60.8 133 33.1
Duzib187G0913 Durio zibethinus HOM05D001798 ORTHO05D005040 1.0e-07 60.8 138 36.2
HanXRQChr05g0137241 Helianthus annuus HOM05D001798 ORTHO05D005040 1.0e-07 60.8 154 33.8
FAN11G1762 Fragaria x ananassa HOM05D001798 ORTHO05D005040 1.3e-07 60.5 113 36.3
MSTRG.26226 Avicennia marina HOM05D001798 ORTHO05D005040 1.7e-07 60.1 132 37.1
CSS0019887 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 1.7e-07 60.1 127 37.8
CSS0022506 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 1.7e-07 60.1 127 37.8
ECA240G2061 Erigeron canadensis HOM05D001798 ORTHO05D005040 1.7e-07 60.1 137 32.8
MD15G1107700 Malus domestica HOM05D001798 ORTHO05D005040 1.7e-07 60.1 142 35.2
RcHm_v2.0_Chr1g0336341 Rosa chinensis HOM05D001798 ORTHO05D005040 1.7e-07 60.1 133 35.3
Ciclev10010207m.g Citrus clementina HOM05D001798 ORTHO05D005040 2.2e-07 59.7 137 35.0
RcHm_v2.0_Chr6g0305001 Rosa chinensis HOM05D001798 ORTHO05D005040 2.2e-07 59.7 126 37.3
TPR.G5377 Trifolium pratense HOM05D001798 ORTHO05D005040 2.2e-07 59.7 129 38.8
Atru.chr7.661 Acer truncatum HOM05D001798 ORTHO05D005040 2.9e-07 59.3 137 32.1
Medtr4g128470 Medicago truncatula HOM05D001798 ORTHO05D005040 2.9e-07 59.3 132 37.9
SGA_v2.0_scaffold69G23263 Striga asiatica HOM05D001798 ORTHO05D005040 2.9e-07 59.3 136 35.3
Haze_19626 Corylus avellana HOM05D001798 ORTHO05D005040 3.8e-07 58.9 130 33.1
Haze_21741 Corylus avellana HOM05D001798 ORTHO05D005040 3.8e-07 58.9 131 35.1
Haze_21742 Corylus avellana HOM05D001798 ORTHO05D005040 3.8e-07 58.9 131 35.1
Cfa016621 Carpinus fangiana HOM05D001798 ORTHO05D005040 5.0e-07 58.5 130 33.8
AUR62009071 Chenopodium quinoa HOM05D001798 ORTHO05D005040 5.0e-07 58.5 132 38.6
MELO3C017469.2 Cucumis melo HOM05D001798 ORTHO05D005040 5.0e-07 58.5 126 34.9
Nn2g12701 Nelumbo nucifera HOM05D001798 ORTHO05D005040 5.0e-07 58.5 136 33.8
QL02p097578 Quercus lobata HOM05D001798 ORTHO05D005040 5.0e-07 58.5 132 34.8
Sabra18G0014500 Salix brachista HOM05D000280 ORTHO05D006100 5.0e-07 58.5 131 35.9
Thecc.09G007300 Theobroma cacao HOM05D001798 ORTHO05D005040 5.0e-07 58.5 72 43.1
Migut.K00248 Erythranthe guttata HOM05D001798 ORTHO05D005040 6.5e-07 58.2 138 35.5
Sed0020469 Sechium edule HOM05D001798 ORTHO05D005040 6.5e-07 58.2 119 34.5
Haze_21745 Corylus avellana HOM05D001798 ORTHO05D005040 8.5e-07 57.8 131 35.1
FAN21G0239 Fragaria x ananassa HOM05D001798 ORTHO05D005040 8.5e-07 57.8 44 61.4
Haze_21738 Corylus avellana HOM05D001798 ORTHO05D005040 1.1e-06 57.4 122 36.1
PGR142G4397 Punica granatum HOM05D001798 ORTHO05D005040 1.1e-06 57.4 129 35.7
TWI34G1338 Tripterygium wilfordii HOM05D001798 ORTHO05D005040 1.1e-06 57.4 126 33.3
Cfa013271 Carpinus fangiana HOM05D001798 ORTHO05D005040 1.4e-06 57.0 130 36.2
Lj4g0012331 Lotus japonicus HOM05D001798 ORTHO05D005040 1.4e-06 57.0 124 35.5
THA.LOC104811795 Tarenaya hassleriana HOM05D001798 ORTHO05D005040 1.4e-06 57.0 134 35.8
ClCG10G000980 Citrullus lanatus HOM05D001798 ORTHO05D022392 1.9e-06 56.6 38 71.1
FAN15G2712 Fragaria x ananassa HOM05D001798 ORTHO05D005040 2.5e-06 56.2 126 33.3
Ca_21215_v3 Cicer arietinum L. HOM05D001798 ORTHO05D005040 3.2e-06 55.8 139 33.1
Ciclev10010310m.g Citrus clementina HOM05D001798 ORTHO05D005040 3.2e-06 55.8 137 33.6
QL02p097572 Quercus lobata HOM05D001798 ORTHO05D005040 3.2e-06 55.8 138 34.1
Sed0003670 Sechium edule HOM05D001798 ORTHO05D022392 3.2e-06 55.8 124 40.3
CsaV3_1G031530 Cucumis sativus L. HOM05D001798 ORTHO05D005040 4.2e-06 55.5 123 35.0
CiPaw.07G212400 Carya illinoinensis HOM05D001798 ORTHO05D005040 7.2e-06 54.7 129 36.4
SalBow1G2776 Salvia bowleyana HOM05D001798 ORTHO05D005040 7.2e-06 54.7 121 35.5
Cfa013270 Carpinus fangiana HOM05D001798 ORTHO05D005040 9.4e-06 54.3 119 33.6
ClCG06G013270 Citrullus lanatus HOM05D001798 ORTHO05D005040 9.4e-06 54.3 125 33.6


User provided reference genes

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