Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004131g0060 Nicotiana tabacum HOM05D001798 ORTHO05D005040 4.0e-60 234.6 119 100.0
Nitab4.5_0004131g0070 Nicotiana tabacum HOM05D001798 ORTHO05D005040 5.4e-49 197.6 116 87.9
PGSC0003DMG400026318 Solanum tuberosum HOM05D001798 ORTHO05D005040 2.2e-34 149.1 118 66.9
Prupe.1G460000 Prunus persica HOM05D001798 ORTHO05D005040 3.7e-13 78.6 118 43.2
Solyc11g008600.1 Solanum lycopersicum HOM05D001798 ORTHO05D005040 4.1e-12 75.1 119 44.5
Nitab4.5_0000555g0220 Nicotiana tabacum HOM05D008707 ORTHO05D005040 5.3e-12 74.7 55 72.7
COL.COLO4_19032 Corchorus olitorius HOM05D001798 ORTHO05D005040 6.9e-12 74.3 116 40.5
CiPaw.08G019800 Carya illinoinensis HOM05D001798 ORTHO05D005040 9.1e-12 73.9 119 44.5
RcHm_v2.0_Chr4g0402691 Rosa chinensis HOM05D001798 ORTHO05D005040 1.2e-11 73.6 118 36.4
Manes.16G135500 Manihot esculenta HOM05D001798 ORTHO05D005040 1.5e-11 73.2 116 40.5
Potri.006G273500 Populus trichocarpa HOM05D001798 ORTHO05D005040 1.5e-11 73.2 119 41.2
Potri.006G273566 Populus trichocarpa HOM05D001798 ORTHO05D005040 1.5e-11 73.2 119 41.2
Sopen11g004390 Solanum pennellii HOM05D001798 ORTHO05D005040 1.5e-11 73.2 119 42.9
Manes.03G004000 Manihot esculenta HOM05D001798 ORTHO05D005040 2.0e-11 72.8 117 39.3
Prupe.1G087800 Prunus persica HOM05D001798 ORTHO05D005040 2.0e-11 72.8 118 39.8
CAN.G321.14 Capsicum annuum HOM05D001798 ORTHO05D005040 2.6e-11 72.4 123 39.8
MBI16_g35923_MAGBIO Magnolia biondii HOM05D001798 ORTHO05D005040 3.4e-11 72.0 116 42.2
FvH4_4g09360 Fragaria vesca HOM05D001798 ORTHO05D005040 7.7e-11 70.9 118 41.5
MBI16_g35927_MAGBIO Magnolia biondii HOM05D000772 ORTHO05D005040 7.7e-11 70.9 116 41.4
Potri.018G006800 Populus trichocarpa HOM05D001798 ORTHO05D005040 7.7e-11 70.9 120 38.3
MD12G1161200 Malus domestica HOM05D001798 ORTHO05D005040 1.7e-10 69.7 117 39.3
QL12p025154 Quercus lobata HOM05D001798 ORTHO05D005040 1.7e-10 69.7 117 43.6
CiPaw.07G191500 Carya illinoinensis HOM05D001798 ORTHO05D005040 2.2e-10 69.3 117 36.8
RcHm_v2.0_Chr4g0402701 Rosa chinensis HOM05D001798 ORTHO05D005040 2.2e-10 69.3 118 37.3
PGSC0003DMG400016261 Solanum tuberosum HOM05D001798 ORTHO05D005040 2.2e-10 69.3 121 42.1
Sabra06G0212200 Salix brachista HOM05D001798 ORTHO05D005040 3.8e-10 68.6 116 38.8
Dinv41255 Davidia involucrata HOM05D001798 ORTHO05D004054 5.0e-10 68.2 117 37.6
FvH4_3g45900 Fragaria vesca HOM05D001798 ORTHO05D005040 6.5e-10 67.8 120 37.5
FAN22G0641 Fragaria x ananassa HOM05D001798 ORTHO05D005040 8.5e-10 67.4 120 37.5
Gohir.D06G107900 Gossypium hirsutum HOM05D001798 ORTHO05D005040 8.5e-10 67.4 118 38.1
Peaxi162Scf00296g00124 Petunia axillaris HOM05D001798 ORTHO05D005040 1.1e-09 67.0 128 35.9
CSS0007301 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 1.4e-09 66.6 119 36.1
Sabra06G0211900 Salix brachista HOM05D001798 ORTHO05D005040 1.4e-09 66.6 117 37.6
MBI16_g35924_MAGBIO Magnolia biondii HOM05D001798 ORTHO05D005040 1.9e-09 66.2 116 40.5
TPR.G5377 Trifolium pratense HOM05D001798 ORTHO05D005040 1.9e-09 66.2 119 38.7
Haze_21738 Corylus avellana HOM05D001798 ORTHO05D005040 2.5e-09 65.9 118 39.8
FAN20G2332 Fragaria x ananassa HOM05D001798 ORTHO05D005040 2.5e-09 65.9 118 35.6
Hma1.2p1_1646F.1_g295510 Hydrangea macrophylla HOM05D001798 ORTHO05D005040 2.5e-09 65.9 117 36.8
Hma1.2p1_2478F.1_g322950 Hydrangea macrophylla HOM05D001798 ORTHO05D005040 3.2e-09 65.5 117 36.8
Sabra18G0014500 Salix brachista HOM05D000280 ORTHO05D006100 3.2e-09 65.5 119 39.5
SalBow6G3226 Salvia bowleyana HOM05D001798 ORTHO05D005040 5.5e-09 64.7 119 37.0
SalBow6G3242 Salvia bowleyana HOM05D001798 ORTHO05D005040 5.5e-09 64.7 119 37.0
Cfa013271 Carpinus fangiana HOM05D001798 ORTHO05D005040 7.2e-09 64.3 117 38.5
Lj4g0012331 Lotus japonicus HOM05D001798 ORTHO05D005040 7.2e-09 64.3 119 37.8
EL10Ac2g03758 Beta vulgaris HOM05D001798 ORTHO05D005040 9.4e-09 63.9 138 35.5
FvH4_2g36750 Fragaria vesca HOM05D001798 ORTHO05D005040 9.4e-09 63.9 118 36.4
Duzib168G0008 Durio zibethinus HOM05D001798 ORTHO05D005040 1.2e-08 63.5 115 36.5
Atru.chr7.2645 Acer truncatum HOM05D001798 ORTHO05D005040 1.6e-08 63.2 116 36.2
Haze_19626 Corylus avellana HOM05D001798 ORTHO05D005040 1.6e-08 63.2 119 35.3
Haze_21741 Corylus avellana HOM05D001798 ORTHO05D005040 1.6e-08 63.2 118 39.8
Haze_21742 Corylus avellana HOM05D001798 ORTHO05D005040 1.6e-08 63.2 118 39.8
Haze_21745 Corylus avellana HOM05D001798 ORTHO05D005040 1.6e-08 63.2 118 39.0
MD15G1107700 Malus domestica HOM05D001798 ORTHO05D005040 1.6e-08 63.2 123 39.8
MSTRG.19701 Avicennia marina HOM05D001798 ORTHO05D005040 2.1e-08 62.8 116 37.9
MD13G1257600 Malus domestica HOM05D001798 ORTHO05D005040 2.1e-08 62.8 118 37.3
SGA_v2.0_scaffold69G23263 Striga asiatica HOM05D001798 ORTHO05D005040 2.1e-08 62.8 117 37.6
Cpa.g.sc23.17 Carica papaya HOM05D001798 ORTHO05D005040 2.7e-08 62.4 111 36.9
Thecc.09G007300 Theobroma cacao HOM05D001798 ORTHO05D005040 2.7e-08 62.4 66 48.5
MELO3C017469.2 Cucumis melo HOM05D001798 ORTHO05D005040 3.6e-08 62.0 117 35.0
RcHm_v2.0_Chr6g0305001 Rosa chinensis HOM05D001798 ORTHO05D005040 3.6e-08 62.0 118 36.4
FAN27G0855 Fragaria x ananassa HOM05D001798 ORTHO05D005040 4.7e-08 61.6 118 33.9
TAR383G0769 Trochodendron aralioides HOM05D001798 ORTHO05D005040 4.7e-08 61.6 117 36.8
CSS0005198 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 6.1e-08 61.2 118 37.3
CSS0011185 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 6.1e-08 61.2 118 37.3
CSS0019887 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 6.1e-08 61.2 118 38.1
CSS0022506 Camellia sinensis var. sinensis HOM05D001798 ORTHO05D005040 6.1e-08 61.2 118 38.1
Cfa016621 Carpinus fangiana HOM05D001798 ORTHO05D005040 6.1e-08 61.2 119 35.3
COL.COLO4_36848 Corchorus olitorius HOM05D001798 ORTHO05D005040 6.1e-08 61.2 123 34.1
CsaV3_1G031530 Cucumis sativus L. HOM05D001798 ORTHO05D005040 6.1e-08 61.2 126 34.1
RcHm_v2.0_Chr1g0336341 Rosa chinensis HOM05D001798 ORTHO05D005040 6.1e-08 61.2 118 36.4
Aqoxy7G03082 Aquilegia oxysepala HOM05D001798 ORTHO05D005040 1.0e-07 60.5 117 35.0
Cpa.g.sc95.60 Carica papaya HOM05D001798 ORTHO05D005040 1.0e-07 60.5 117 37.6
Ciclev10010207m.g Citrus clementina HOM05D001798 ORTHO05D005040 1.0e-07 60.5 118 40.7
Gorai.010G122600 Gossypium raimondii HOM05D001798 ORTHO05D005040 1.0e-07 60.5 120 35.8
Ciclev10009891m.g Citrus clementina HOM05D001798 ORTHO05D005040 1.4e-07 60.1 126 33.3
Gohir.A06G105500 Gossypium hirsutum HOM05D001798 ORTHO05D005040 1.4e-07 60.1 121 38.0
QL02p097572 Quercus lobata HOM05D001798 ORTHO05D005040 1.8e-07 59.7 117 35.0
ECA240G2061 Erigeron canadensis HOM05D001798 ORTHO05D005040 2.3e-07 59.3 126 34.1
SalBow1G2776 Salvia bowleyana HOM05D001798 ORTHO05D005040 2.3e-07 59.3 123 35.0
Sed0020469 Sechium edule HOM05D001798 ORTHO05D005040 2.3e-07 59.3 118 34.7
SGA_v2.0_scaffold12G06063 Striga asiatica HOM05D001798 ORTHO05D005040 2.3e-07 59.3 116 38.8
Duzib187G0913 Durio zibethinus HOM05D001798 ORTHO05D005040 3.0e-07 58.9 117 35.0
Eucgr.C00167 Eucalyptus grandis HOM05D001798 ORTHO05D005040 3.0e-07 58.9 117 35.9
Ciclev10010310m.g Citrus clementina HOM05D001798 ORTHO05D005040 3.9e-07 58.5 118 39.8
Medtr4g128470 Medicago truncatula HOM05D001798 ORTHO05D005040 3.9e-07 58.5 33 81.8
Potri.018G094100 Populus trichocarpa HOM05D001798 ORTHO05D005040 3.9e-07 58.5 122 35.2
SGA_v2.0_scaffold301G47805 Striga asiatica HOM05D000485 ORTHO05D005040 3.9e-07 58.5 118 39.0
Duzib170G0014 Durio zibethinus HOM05D001798 ORTHO05D005040 6.7e-07 57.8 125 32.8
FAN15G2712 Fragaria x ananassa HOM05D001798 ORTHO05D005040 6.7e-07 57.8 116 35.3
Migut.J01450 Erythranthe guttata HOM05D001798 ORTHO05D005040 8.8e-07 57.4 116 37.1
Cfa013270 Carpinus fangiana HOM05D001798 ORTHO05D005040 1.1e-06 57.0 117 37.6
AUR62009071 Chenopodium quinoa HOM05D001798 ORTHO05D005040 1.1e-06 57.0 121 37.2
QL02p097578 Quercus lobata HOM05D001798 ORTHO05D005040 1.1e-06 57.0 126 34.1
FAN11G1762 Fragaria x ananassa HOM05D001798 ORTHO05D005040 2.0e-06 56.2 69 46.4
PGR142G4397 Punica granatum HOM05D001798 ORTHO05D005040 2.0e-06 56.2 119 34.5
MSTRG.26226 Avicennia marina HOM05D001798 ORTHO05D005040 2.6e-06 55.8 125 32.0
Migut.K00248 Erythranthe guttata HOM05D001798 ORTHO05D005040 2.6e-06 55.8 118 34.7
Nn2g12701 Nelumbo nucifera HOM05D001798 ORTHO05D005040 2.6e-06 55.8 125 32.0
CiPaw.07G212400 Carya illinoinensis HOM05D001798 ORTHO05D005040 3.3e-06 55.5 115 37.4
Lsat_1_v5_gn_8_67120 Lactuca sativa HOM05D001798 ORTHO05D005040 3.3e-06 55.5 128 31.2
MD08G1128200 Malus domestica HOM05D001798 ORTHO05D005040 3.3e-06 55.5 120 35.8
Psat4g011600 Pisum sativum HOM05D001798 ORTHO05D005040 3.3e-06 55.5 67 52.2
FAN21G0239 Fragaria x ananassa HOM05D001798 ORTHO05D005040 4.4e-06 55.1 103 37.9
HanXRQChr05g0137241 Helianthus annuus HOM05D001798 ORTHO05D005040 4.4e-06 55.1 131 33.6
TWI34G0376 Tripterygium wilfordii HOM05D001798 ORTHO05D005040 4.4e-06 55.1 117 33.3
Ca_21215_v3 Cicer arietinum L. HOM05D001798 ORTHO05D005040 5.7e-06 54.7 33 75.8
ClCG06G013270 Citrullus lanatus HOM05D001798 ORTHO05D005040 7.4e-06 54.3 117 34.2
Manes.14G151300 Manihot esculenta HOM05D001798 ORTHO05D005040 7.4e-06 54.3 117 32.5
Ah.11g043870 Amaranthus hybridus HOM05D001798 ORTHO05D005040 9.7e-06 53.9 120 36.7
AUR62020597 Chenopodium quinoa HOM05D001798 ORTHO05D005040 9.7e-06 53.9 123 35.8
Lalb_Chr12g0199341 Lupinus albus HOM05D001798 ORTHO05D005040 9.7e-06 53.9 128 35.2
PSO349G0296 Papaver somniferum HOM05D001798 ORTHO05D005040 9.7e-06 53.9 121 33.9


User provided reference genes

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