Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 0.0e+00 1118.2 609 100.0
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 8.1e-290 1000.0 662 84.3
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 7.4e-251 870.5 708 73.3
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 1.3e-244 849.7 655 74.8
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 2.4e-233 812.4 653 72.4
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 3.2e-230 802.0 651 71.7
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 2.2e-154 550.1 668 51.0
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 9.6e-142 508.1 674 49.3
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 2.6e-139 500.0 650 49.5
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 4.5e-139 499.2 662 49.5
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 1.0e-138 498.0 653 48.5
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 1.7e-138 497.3 632 48.6
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 3.2e-137 493.0 661 48.9
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 3.5e-136 489.6 637 48.8
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 6.0e-136 488.8 653 46.4
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 2.3e-135 486.9 643 43.7
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 4.3e-134 482.6 671 45.9
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 5.7e-134 482.3 655 45.6
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 5.7e-134 482.3 656 47.7
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 7.4e-134 481.9 661 46.6
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 7.4e-134 481.9 659 46.3
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 4.8e-133 479.2 661 45.4
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.4e-132 477.6 652 46.2
Nitab4.5_0000229g0020 Nicotiana tabacum HOM05D003570 ORTHO05D004207 4.1e-132 476.1 339 80.5
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 1.5e-131 474.2 646 46.3
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 1.5e-131 474.2 655 47.5
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 3.4e-131 473.0 647 45.9
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 1.9e-129 467.2 649 46.4
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 9.3e-129 464.9 652 47.4
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 1.0e-127 461.5 643 44.3
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 1.9e-126 457.2 644 45.7
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 7.4e-126 455.3 651 45.9
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 7.4e-126 455.3 641 45.7
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 8.2e-125 451.8 645 45.6
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 3.1e-124 449.9 663 45.1
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 6.9e-124 448.7 637 45.2
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 9.1e-124 448.4 655 42.1
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 4.5e-123 446.0 627 44.8
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 2.9e-122 443.4 492 53.0
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.1e-121 441.4 627 44.0
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 1.4e-121 441.0 641 41.3
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 9.4e-121 438.3 627 43.9
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 4.6e-120 436.0 628 43.8
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 2.0e-118 430.6 669 43.5
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 3.3e-118 429.9 654 42.7
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 3.3e-118 429.9 641 45.7
Nitab4.5_0000229g0040 Nicotiana tabacum HOM05D003570 ORTHO05D004207 5.7e-118 429.1 303 78.9
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 4.8e-117 426.0 633 42.3
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 2.4e-116 423.7 642 43.8
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 5.3e-116 422.5 636 43.9
PGSC0003DMG400016968 Solanum tuberosum HOM05D003570 ORTHO05D004207 4.5e-115 419.5 257 82.5
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 7.7e-115 418.7 646 43.3
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 1.3e-114 417.9 647 43.9
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 8.5e-114 415.2 546 48.5
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 1.1e-113 414.8 630 42.9
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 4.2e-113 412.9 645 40.0
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 4.7e-112 409.5 631 42.3
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 6.1e-112 409.1 648 40.9
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 1.0e-111 408.3 653 41.2
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 1.4e-111 407.9 654 42.8
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 3.9e-111 406.4 637 40.0
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 4.4e-110 402.9 631 44.2
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 1.4e-108 397.9 638 44.8
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 2.4e-108 397.1 639 40.2
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 9.1e-108 395.2 638 41.5
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 2.6e-107 393.7 650 42.9
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 4.2e-105 386.3 638 43.4
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 5.5e-105 386.0 636 42.3
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 9.4e-105 385.2 672 40.8
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 2.7e-104 383.6 615 41.8
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 3.0e-103 380.2 647 41.6
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 8.8e-103 378.6 580 45.3
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 1.8e-100 370.9 538 45.2
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 2.7e-99 367.1 605 44.8
Lj3A151T25 Lonicera japonica HOM05D003570 ORTHO05D004207 1.6e-96 357.8 370 52.4
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 1.3e-93 348.2 631 41.7
Oeu038646.1 Olea europaea HOM05D003570 ORTHO05D004207 4.1e-92 343.2 423 49.9
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 3.5e-91 340.1 624 38.3
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 7.7e-91 339.0 596 38.9
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 5.0e-90 336.3 634 36.6
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 4.2e-89 333.2 628 39.2
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 2.8e-88 330.5 640 35.3
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 1.8e-87 327.8 652 36.7
Dinv15203 Davidia involucrata HOM05D003570 ORTHO05D004207 4.0e-87 326.6 232 70.3
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 8.8e-87 325.5 632 37.7
Dinv11043 Davidia involucrata HOM05D003570 ORTHO05D004207 1.5e-86 324.7 471 48.6
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 2.6e-86 323.9 627 37.2
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 7.5e-86 322.4 642 38.9
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 2.8e-85 320.5 656 36.4
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 1.8e-84 317.8 630 37.5
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 2.7e-83 313.9 609 36.3
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 2.7e-83 313.9 652 34.7
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 5.9e-83 312.8 510 44.5
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 8.6e-82 308.9 638 37.3
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 2.5e-81 307.4 556 40.3
Hma1.2p1_1533F.1_g289360 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 2.6e-78 297.4 263 58.2
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 2.2e-77 294.3 535 36.6
PSO754G0035 Papaver somniferum HOM05D003570 ORTHO05D004207 9.2e-76 288.9 319 49.5
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 5.9e-75 286.2 622 33.6
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 1.7e-74 284.6 514 40.3
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 4.3e-73 280.0 658 35.4
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 4.3e-73 280.0 529 37.2
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 9.5e-73 278.9 648 36.7
PSO063G1535 Papaver somniferum HOM05D003570 ORTHO05D004207 6.2e-72 276.2 304 48.7
Rhsim12G0107900 Rhododendron simsii HOM05D003570 ORTHO05D004207 3.7e-69 266.9 376 49.5
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 1.4e-68 265.0 614 34.9
Aqoxy5G03688 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 2.7e-67 260.8 231 55.0
vmacro16170 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 2.7e-67 260.8 371 51.2
Sabra08G0139700 Salix brachista HOM05D003570 ORTHO05D004207 4.6e-67 260.0 218 59.2
Rhsim12G0108000 Rhododendron simsii HOM05D003570 ORTHO05D004207 1.0e-66 258.8 287 49.8
vmacro16171 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 3.3e-65 253.8 250 53.6
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 4.1e-60 236.9 602 31.6
SMO367G0645 Selaginella moellendorffii HOM05D003570 ORTHO05D004207 9.2e-60 235.7 608 31.1
vmacro16173 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 2.1e-59 234.6 247 52.2
vmacro16172 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 3.9e-58 230.3 434 41.9
Aqoxy1G03220 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.2e-56 225.3 227 52.0
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 2.4e-55 221.1 603 33.5
Sopen04g013730 Solanum pennellii HOM05D003570 ORTHO05D004207 3.3e-49 200.7 122 79.5
Haze_11814 Corylus avellana HOM05D001314 ORTHO05D001165 1.1e-47 195.7 241 47.7
CSS0045431 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 1.4e-47 195.3 145 66.9
CDE06G1553 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 3.1e-47 194.1 177 50.8
unitig_22.g6426 Utricularia gibba HOM05D003570 ORTHO05D004207 1.3e-45 188.7 166 53.0
CSS0031984 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 5.4e-44 183.3 228 45.2
Haze_20779 Corylus avellana HOM05D003570 ORTHO05D004207 3.9e-42 177.2 129 65.9
CBR_g38118 Chara braunii HOM05D003570 ORTHO05D004207 1.5e-41 175.3 714 26.6
Hma1.2p1_1533F.1_g289350 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 4.8e-40 170.2 149 57.0
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 4.5e-38 163.7 561 28.5
AagrBONN_evm.TU.Sc2ySwM_362.2178 Anthoceros agrestis HOM05D003570 ORTHO05D004207 3.8e-37 160.6 169 45.6
FAN08G0154 Fragaria x ananassa HOM05D003570 ORTHO05D004207 3.8e-37 160.6 436 33.9
Aqoxy5G03687 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.2e-35 155.6 248 40.3
FAN13G1935 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.4e-31 141.4 371 37.2
EL10Ac8g19584 Beta vulgaris HOM05D003570 ORTHO05D004207 5.3e-31 140.2 119 54.6
Lj3A151T24 Lonicera japonica HOM05D003570 ORTHO05D004207 2.0e-30 138.3 190 48.4
BolC4t26878H Brassica oleracea HOM05D003570 ORTHO05D004207 1.2e-27 129.0 201 38.8
Hma1.2p1_0054F.1_g030990 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 2.1e-27 128.3 89 65.2
FAN08G3485 Fragaria x ananassa HOM05D003570 ORTHO05D004207 3.5e-27 127.5 123 52.8
MCO05G059 Micromonas commoda HOM05D003570 ORTHO05D004207 1.0e-26 125.9 336 28.0
TAR374G0522 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.0e-26 125.9 100 62.0
AT4G05523 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 1.3e-26 125.6 207 38.2
A07p19900 Brassica napus HOM05D003570 ORTHO05D004207 6.7e-26 123.2 201 36.3
Medtr7g034350 Medicago truncatula HOM05D003570 ORTHO05D004207 8.7e-26 122.9 187 39.0
C04p53310 Brassica napus HOM05D003570 ORTHO05D004207 2.5e-25 121.3 204 37.7
BolC5t29767H Brassica oleracea HOM05D003570 ORTHO05D004207 2.5e-25 121.3 243 32.9
A07p18160 Brassica napus HOM05D003570 ORTHO05D004207 4.3e-25 120.6 196 36.2
BraA01t00580Z Brassica rapa HOM05D003570 ORTHO05D004207 4.3e-25 120.6 196 36.2
AL2G22720 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.6e-24 118.6 140 45.7
BcaC02g08536 Brassica carinata HOM05D003570 ORTHO05D004207 8.2e-24 116.3 168 39.3
Cre06.g300900 Chlamydomonas reinhardtii HOM05D003570 ORTHO05D004207 1.8e-23 115.2 198 34.8
EL10As2g23164 Beta vulgaris HOM05D003570 ORTHO05D004207 1.1e-20 105.9 156 40.4
C04p53220 Brassica napus HOM05D003570 ORTHO05D004207 1.1e-20 105.9 150 41.3
BcaC06g34341 Brassica carinata HOM05D003570 ORTHO05D004207 2.5e-20 104.8 196 31.1
CAN.G149.33 Capsicum annuum HOM05D001546 ORTHO05D015824 2.5e-20 104.8 71 76.1
BcaC05g25085 Brassica carinata HOM05D003570 ORTHO05D004207 5.5e-20 103.6 303 30.7
CAN.G189.38 Capsicum annuum HOM05D003570 ORTHO05D004207 6.0e-19 100.1 60 86.7
Glyma.18G013000 Glycine max HOM05D003570 ORTHO05D004207 7.9e-19 99.8 85 54.1
unitig_22.g6425 Utricularia gibba HOM05D003570 ORTHO05D004207 1.3e-18 99.0 242 34.7
AL2G22730 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 6.7e-18 96.7 105 44.8
CDE06G0651 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 6.7e-18 96.7 250 37.2
PRCOL_00001147 Prasinoderma coloniale HOM05D003570 ORTHO05D004207 3.3e-17 94.4 310 27.4
TAR374G0931 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.6e-16 92.0 131 45.0
Actinidia15111 Actinidia chinensis HOM05D003570 ORTHO05D004207 2.2e-16 91.7 71 64.8
BcaC05g25084 Brassica carinata HOM05D003570 ORTHO05D004207 3.7e-16 90.9 183 32.8
Actinidia15112 Actinidia chinensis HOM05D003570 ORTHO05D004207 6.3e-16 90.1 83 53.0
C05p10220 Brassica napus HOM05D003570 ORTHO05D004207 6.9e-15 86.7 239 28.0
FvH4_5g15750 Fragaria vesca HOM05D003570 ORTHO05D004207 5.9e-14 83.6 72 59.7
Sp2g10400 Schrenkiella parvula HOM05D003570 ORTHO05D004207 7.6e-14 83.2 108 45.4
AagrBONN_evm.TU.Sc2ySwM_344.4464 Anthoceros agrestis HOM05D003570 ORTHO05D004207 5.5e-12 77.0 351 28.2
MD05G1151500 Malus domestica HOM05D003570 ORTHO05D004207 9.3e-12 76.3 49 71.4
EL10Ac1g01653 Beta vulgaris HOM05D003570 ORTHO05D004207 1.2e-11 75.9 49 69.4
C07p30160 Brassica napus HOM05D003570 ORTHO05D004207 1.6e-11 75.5 76 46.1
CAN.G294.19 Capsicum annuum HOM05D003570 ORTHO05D004207 2.7e-11 74.7 218 31.7
PSO063G3896 Papaver somniferum HOM05D003570 ORTHO05D004207 1.9e-09 68.6 252 31.3
Hund04894 Selenicereus undatus HOM05D003570 ORTHO05D004207 5.7e-09 67.0 68 50.0
CDE06G1606 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 9.7e-09 66.2 88 40.9
FvH4_5g15741 Fragaria vesca HOM05D003570 ORTHO05D004207 2.2e-08 65.1 148 32.4
FAN18G0384 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.2e-08 65.1 148 32.4
BcaC02g12092 Brassica carinata HOM05D003570 ORTHO05D004207 3.7e-08 64.3 54 50.0
BolC4t26886H Brassica oleracea HOM05D003570 ORTHO05D004207 4.8e-08 63.9 50 54.0
QL93p0107_0801 Quercus lobata HOM05D003570 ORTHO05D004207 1.8e-07 62.0 143 39.2
CARHR253470 Cardamine hirsuta HOM05D003570 ORTHO05D004207 2.4e-07 61.6 158 34.8
C03p39130 Brassica napus HOM05D003570 ORTHO05D004207 5.3e-07 60.5 121 31.4
Solyc04g026000.2 Solanum lycopersicum HOM05D003570 ORTHO05D004207 1.2e-06 59.3 69 50.7
C07p30170 Brassica napus HOM05D003570 ORTHO05D004207 7.7e-06 56.6 70 40.0


User provided reference genes

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