Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004104g0120 Nicotiana tabacum HOM05D003984 ORTHO05D004740 9.0e-142 506.9 255 100.0
Nitab4.5_0000691g0240 Nicotiana tabacum HOM05D003984 ORTHO05D004740 3.1e-134 481.9 250 98.0
Peaxi162Scf00195g00824 Petunia axillaris HOM05D003984 ORTHO05D004740 1.1e-128 463.4 250 94.0
Nitab4.5_0000830g0100 Nicotiana tabacum HOM05D003984 ORTHO05D004740 1.4e-123 446.4 250 88.8
PGSC0003DMG400032551 Solanum tuberosum HOM05D003984 ORTHO05D004740 9.3e-123 443.7 250 90.8
CAN.G186.31 Capsicum annuum HOM05D003984 ORTHO05D004740 1.6e-122 443.0 250 90.4
Nitab4.5_0001248g0030 Nicotiana tabacum HOM05D003984 ORTHO05D004740 2.7e-122 442.2 250 88.8
Solyc04g049710.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 7.9e-122 440.7 250 88.4
Sopen04g019960 Solanum pennellii HOM05D003984 ORTHO05D004740 1.0e-121 440.3 250 88.4
Solyc04g009550.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 1.8e-121 439.5 250 89.2
SGA_v2.0_scaffold62G21447 Striga asiatica HOM05D003984 ORTHO05D004740 1.8e-121 439.5 250 87.2
Peaxi162Scf01024g00120 Petunia axillaris HOM05D003984 ORTHO05D004740 1.3e-119 433.3 250 87.6
SGA_v2.0_scaffold329G48849 Striga asiatica HOM05D003984 ORTHO05D004740 3.7e-119 431.8 259 85.3
MSTRG.27450 Avicennia marina HOM05D003984 ORTHO05D004740 8.2e-119 430.6 250 86.0
Oeu055063.1 Olea europaea HOM05D003984 ORTHO05D004740 2.4e-118 429.1 250 84.8
Cc09_g02350 Coffea canephora HOM05D003984 ORTHO05D004740 3.1e-118 428.7 250 85.2
QL08p057270 Quercus lobata HOM05D003984 ORTHO05D004740 1.2e-117 426.8 250 84.8
RcHm_v2.0_Chr1g0364411 Rosa chinensis HOM05D003984 ORTHO05D004740 2.0e-117 426.0 250 84.4
Migut.F02015 Erythranthe guttata HOM05D003984 ORTHO05D004740 3.4e-117 425.2 250 83.2
Dinv11820 Davidia involucrata HOM05D003984 ORTHO05D004740 5.9e-117 424.5 250 84.4
Rhsim09G0154900 Rhododendron simsii HOM05D003984 ORTHO05D004740 3.8e-116 421.8 250 84.0
Atru.chr12.610 Acer truncatum HOM05D003984 ORTHO05D004740 5.0e-116 421.4 250 84.4
CSS0002243 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 5.0e-116 421.4 251 84.5
CiPaw.01G278000 Carya illinoinensis HOM05D003984 ORTHO05D004740 6.5e-116 421.0 250 83.2
Dinv31376 Davidia involucrata HOM05D003984 ORTHO05D004740 6.5e-116 421.0 250 84.4
MD01G1114200 Malus domestica HOM05D003984 ORTHO05D004740 6.5e-116 421.0 250 83.6
CSS0011111 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 8.5e-116 420.6 250 84.8
Prupe.2G220800 Prunus persica HOM05D003984 ORTHO05D004740 1.9e-115 419.5 250 82.8
MD07G1182100 Malus domestica HOM05D003984 ORTHO05D004740 2.5e-115 419.1 250 83.2
CSS0025505 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 3.2e-115 418.7 250 82.8
CiPaw.02G177500 Carya illinoinensis HOM05D003984 ORTHO05D004740 5.5e-115 417.9 251 84.1
DCAR_015251 Daucus carota HOM05D003984 ORTHO05D004740 7.2e-115 417.5 250 82.4
COL.COLO4_23777 Corchorus olitorius HOM05D003984 ORTHO05D004740 9.4e-115 417.2 250 83.6
ClCG09G020350 Citrullus lanatus HOM05D003984 ORTHO05D004740 2.1e-114 416.0 250 83.2
CSS0036351 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 2.7e-114 415.6 250 82.4
Lj8A94T49 Lonicera japonica HOM05D003984 ORTHO05D004740 4.6e-114 414.8 251 82.9
Manes.10G040500 Manihot esculenta HOM05D003984 ORTHO05D004740 4.6e-114 414.8 250 83.6
CANSAT56G1305 Cannabis sativa HOM05D003984 ORTHO05D004740 1.4e-113 413.3 250 81.2
Oeu057248.1 Olea europaea HOM05D003984 ORTHO05D004740 1.4e-113 413.3 250 83.2
CsaV3_5G026080 Cucumis sativus L. HOM05D003984 ORTHO05D004740 1.8e-113 412.9 250 82.8
Medtr1g116240 Medicago truncatula HOM05D003984 ORTHO05D004740 1.8e-113 412.9 250 83.6
Actinidia13840 Actinidia chinensis HOM05D003984 ORTHO05D004740 2.3e-113 412.5 250 82.4
TPR.G10390 Trifolium pratense HOM05D003984 ORTHO05D004740 3.0e-113 412.1 250 82.8
Cfa001574 Carpinus fangiana HOM05D003984 ORTHO05D004740 6.7e-113 411.0 250 82.0
Lj5g0020432 Lotus japonicus HOM05D003984 ORTHO05D004740 1.1e-112 410.2 250 82.0
Lalb_Chr02g0144171 Lupinus albus HOM05D003984 ORTHO05D004740 1.1e-112 410.2 250 82.4
Manes.07G104700 Manihot esculenta HOM05D003984 ORTHO05D004740 1.1e-112 410.2 250 82.8
FvH4_7g20520 Fragaria vesca HOM05D003984 ORTHO05D004740 2.0e-112 409.5 250 81.6
FAN10G1795 Fragaria x ananassa HOM05D003984 ORTHO05D004740 2.0e-112 409.5 250 82.0
Psat6g240040 Pisum sativum HOM05D003984 ORTHO05D004740 3.3e-112 408.7 250 82.4
Thecc.10G065000 Theobroma cacao HOM05D003984 ORTHO05D004740 3.3e-112 408.7 250 82.0
Ciclev10032445m.g Citrus clementina HOM05D003984 ORTHO05D004740 4.3e-112 408.3 251 83.3
FAN03G0045 Fragaria x ananassa HOM05D003984 ORTHO05D004740 4.3e-112 408.3 250 81.2
FAN06G2832 Fragaria x ananassa HOM05D003984 ORTHO05D004740 4.3e-112 408.3 250 81.6
Migut.F01787 Erythranthe guttata HOM05D003984 ORTHO05D004740 7.4e-112 407.5 251 81.7
Lalb_Chr21g0307521 Lupinus albus HOM05D003984 ORTHO05D004740 9.7e-112 407.1 257 80.9
Potri.008G046000 Populus trichocarpa HOM05D003984 ORTHO05D004740 9.7e-112 407.1 250 82.8
Potri.010G215500 Populus trichocarpa HOM05D003984 ORTHO05D004740 1.3e-111 406.8 252 83.7
AUR62036011 Chenopodium quinoa HOM05D003984 ORTHO05D004740 2.8e-111 405.6 250 80.8
Sed0003028 Sechium edule HOM05D003984 ORTHO05D004740 2.8e-111 405.6 250 80.4
EL10Ac2g03538 Beta vulgaris HOM05D003984 ORTHO05D004740 4.8e-111 404.8 251 81.7
Lalb_Chr06g0164371 Lupinus albus HOM05D003984 ORTHO05D004740 4.8e-111 404.8 250 82.4
TWI15G0393 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 4.8e-111 404.8 250 81.2
PGR044G2197 Punica granatum HOM05D003984 ORTHO05D004740 8.2e-111 404.1 250 82.4
AUR62041612 Chenopodium quinoa HOM05D003984 ORTHO05D004740 3.1e-110 402.1 249 80.3
TWI63G0288 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 3.1e-110 402.1 250 80.4
DCAR_019150 Daucus carota HOM05D003984 ORTHO05D004740 4.1e-110 401.7 249 80.7
TAR633G2252 Trochodendron aralioides HOM05D003984 ORTHO05D004740 4.1e-110 401.7 250 79.2
GSVIVG01032647001 Vitis vinifera HOM05D003984 ORTHO05D004740 6.9e-110 401.0 250 80.0
Duzib128G0096 Durio zibethinus HOM05D003984 ORTHO05D004740 2.0e-109 399.4 250 81.6
Glyma.20G244200 Glycine max HOM05D003984 ORTHO05D004740 7.7e-109 397.5 250 80.0
VMungo0720G0811 Vigna mungo HOM05D003984 ORTHO05D004740 1.0e-108 397.1 251 80.5
Glyma.10G294300 Glycine max HOM05D003984 ORTHO05D004740 1.3e-108 396.7 250 79.6
Sabra08G0032300 Salix brachista HOM05D003984 ORTHO05D004740 1.3e-108 396.7 258 79.8
Duzib114G0791 Durio zibethinus HOM05D003984 ORTHO05D004740 2.2e-108 396.0 250 81.2
TAR623G0696 Trochodendron aralioides HOM05D003984 ORTHO05D004740 5.0e-108 394.8 254 76.4
Nn2g10608 Nelumbo nucifera HOM05D003984 ORTHO05D004740 1.4e-107 393.3 252 77.0
Ah.10g033080 Amaranthus hybridus HOM05D003984 ORTHO05D004740 7.2e-107 391.0 274 75.2
Gohir.D10G216200 Gossypium hirsutum HOM05D003984 ORTHO05D004740 9.4e-107 390.6 250 79.6
SalBow3G2899 Salvia bowleyana HOM05D003984 ORTHO05D004740 9.4e-107 390.6 256 77.7
Eucgr.J01137 Eucalyptus grandis HOM05D003984 ORTHO05D004740 1.6e-106 389.8 250 80.4
Gorai.011G241800 Gossypium raimondii HOM05D003984 ORTHO05D004740 1.6e-106 389.8 250 79.6
Phvul.007G005800 Phaseolus vulgaris HOM05D003984 ORTHO05D004740 1.6e-106 389.8 251 79.7
Sabra10G0166500 Salix brachista HOM05D003984 ORTHO05D004740 6.1e-106 387.9 284 73.2
Gorai.012G092700 Gossypium raimondii HOM05D003984 ORTHO05D004740 7.9e-106 387.5 250 77.6
arahy.Tifrunner.gnm1.ann1.V3HSKN Arachis hypogaea HOM05D003984 ORTHO05D004740 1.4e-105 386.7 250 79.2
Gohir.A05G343700 Gossypium hirsutum HOM05D003984 ORTHO05D004740 6.7e-105 384.4 250 77.2
Hund22456 Selenicereus undatus HOM05D003984 ORTHO05D004740 6.7e-105 384.4 251 80.1
Gohir.A10G208060 Gossypium hirsutum HOM05D003984 ORTHO05D004740 1.5e-104 383.3 250 78.8
ECA238G2056 Erigeron canadensis HOM05D003984 ORTHO05D004740 2.6e-104 382.5 250 77.2
Lj1A928T58 Lonicera japonica HOM05D003984 ORTHO05D004740 2.6e-104 382.5 291 69.1
THA.LOC104825886 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 7.4e-104 380.9 250 77.2
Nn2g12956 Nelumbo nucifera HOM05D003984 ORTHO05D004740 9.7e-104 380.6 253 76.7
THA.LOC104810167 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 9.7e-104 380.6 250 76.8
THA.LOC104824242 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 3.7e-103 378.6 250 77.2
PSO384G2137 Papaver somniferum HOM05D003984 ORTHO05D004740 3.1e-102 375.6 250 76.4
Sed0000226 Sechium edule HOM05D003984 ORTHO05D004740 5.3e-102 374.8 250 76.0
PSO339G0239 Papaver somniferum HOM05D003984 ORTHO05D004740 9.1e-102 374.0 250 76.0
HanXRQChr12g0367731 Helianthus annuus HOM05D003984 ORTHO05D004740 1.2e-101 373.6 250 76.0
PSO339G2647 Papaver somniferum HOM05D003984 ORTHO05D004740 1.9e-99 366.3 252 75.0
Aqoxy4G03159 Aquilegia oxysepala HOM05D003984 ORTHO05D004740 1.2e-98 363.6 265 71.7
ATR0594G132 Amborella trichopoda HOM05D003984 ORTHO05D004740 6.1e-98 361.3 251 72.5
HanXRQChr07g0200921 Helianthus annuus HOM05D003984 ORTHO05D004740 6.1e-98 361.3 250 74.0
Lsat_1_v5_gn_2_115481 Lactuca sativa HOM05D003984 ORTHO05D004740 6.1e-98 361.3 243 75.7
arahy.Tifrunner.gnm1.ann1.B234YK Arachis hypogaea HOM05D003984 ORTHO05D004740 1.4e-97 360.1 303 65.0
Haze_16954 Corylus avellana HOM05D003984 ORTHO05D004740 2.3e-97 359.4 221 79.6
CDE09G0608 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 1.7e-95 353.2 251 72.5
unitig_0.g190 Utricularia gibba HOM05D003984 ORTHO05D004740 2.2e-95 352.8 235 76.2
Gohir.D04G082100 Gossypium hirsutum HOM05D003984 ORTHO05D004740 2.4e-94 349.4 227 77.1
Aa31sc33G70 Aethionema arabicum HOM05D003984 ORTHO05D004740 3.1e-94 349.0 253 72.3
Os11g0102600 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 5.3e-94 348.2 252 69.4
Os12g0102200 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 5.3e-94 348.2 252 69.4
Thhalv10010647m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 9.1e-94 347.4 250 72.0
AL5G36110 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 1.6e-93 346.7 250 71.6
Sopen04g004710 Solanum pennellii HOM05D003984 ORTHO05D004740 1.6e-93 346.7 198 89.4
HPP92_019786 Vanilla planifolia HOM05D003984 ORTHO05D004740 1.6e-93 346.7 251 69.7
CDE02G0952 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 2.6e-93 345.9 251 70.5
HPP92_017944 Vanilla planifolia HOM05D003984 ORTHO05D004740 4.5e-93 345.1 252 71.0
AT3G55000 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 1.0e-92 344.0 250 71.6
Ca_11380_v3 Cicer arietinum L. HOM05D003984 ORTHO05D004740 1.0e-92 344.0 258 71.3
BcaC08g44716 Brassica carinata HOM05D003984 ORTHO05D004740 3.8e-92 342.0 250 70.0
C06p22550 Brassica napus HOM05D003984 ORTHO05D004740 3.8e-92 342.0 250 70.0
HanXRQChr14g0460861 Helianthus annuus HOM05D003984 ORTHO05D004740 3.8e-92 342.0 250 72.8
AL5G36120 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 6.5e-92 341.3 250 70.4
CARHR165000 Cardamine hirsuta HOM05D003984 ORTHO05D004740 8.5e-92 340.9 250 71.2
Lsat_1_v5_gn_8_21240 Lactuca sativa HOM05D003984 ORTHO05D004740 1.1e-91 340.5 252 70.6
BcaB02g07705 Brassica carinata HOM05D003984 ORTHO05D004740 2.5e-91 339.3 250 70.4
A07p22390 Brassica napus HOM05D003984 ORTHO05D004740 2.5e-91 339.3 250 70.4
Carub.0005s2162 Capsella rubella HOM05D003984 ORTHO05D004740 2.5e-91 339.3 250 70.4
Lj1C926T5 Lonicera japonica HOM05D003984 ORTHO05D004740 3.2e-91 339.0 251 69.3
AT3G55005 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 4.2e-91 338.6 250 70.8
MSTRG.9196 Avicennia marina HOM05D003984 ORTHO05D004740 7.2e-91 337.8 199 85.9
Sp5g07420 Schrenkiella parvula HOM05D003984 ORTHO05D004740 7.2e-91 337.8 251 70.9
BolC6t37445H Brassica oleracea HOM05D003984 ORTHO05D004740 1.6e-90 336.7 250 69.6
Zm00001eb094350 Zea mays HOM05D003984 ORTHO05D004740 1.0e-89 334.0 252 67.5
Sp5g07430 Schrenkiella parvula HOM05D003984 ORTHO05D004740 4.0e-89 332.0 250 71.6
BraA07t29915Z Brassica rapa HOM05D003984 ORTHO05D004740 7.5e-88 327.8 269 65.4
Carub.0005s2163 Capsella rubella HOM05D003984 ORTHO05D004740 9.7e-88 327.4 250 69.2
MELO3C025490.2 Cucumis melo HOM05D003984 ORTHO05D004740 3.7e-87 325.5 206 80.6
Sc20g0002240 Simmondsia chinensis HOM05D003984 ORTHO05D004740 1.4e-86 323.6 242 69.4
Zm00001eb163130 Zea mays HOM05D003984 ORTHO05D004740 1.8e-86 323.2 252 66.7
CARHR165010 Cardamine hirsuta HOM05D003984 ORTHO05D004740 9.1e-86 320.9 251 66.5
BraA09t40255Z Brassica rapa HOM05D003984 ORTHO05D004740 2.7e-82 309.3 250 64.8
Thhalv10010676m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 1.2e-80 303.9 241 68.0
A09p48020 Brassica napus HOM05D003984 ORTHO05D004740 2.0e-80 303.1 250 63.2
C08p30240 Brassica napus HOM05D003984 ORTHO05D004740 9.8e-80 300.8 249 63.9
BcaB01g00136 Brassica carinata HOM05D003984 ORTHO05D004740 8.3e-79 297.7 250 63.2
BcaNung04652 Brassica carinata HOM05D003984 ORTHO05D004740 2.0e-77 293.1 249 62.2
BolC8t50631H Brassica oleracea HOM05D003984 ORTHO05D004740 8.6e-76 287.7 250 60.8
Sc20g0002230 Simmondsia chinensis HOM05D003984 ORTHO05D004740 7.2e-75 284.6 190 76.3
FAN01G2342 Fragaria x ananassa HOM05D003984 ORTHO05D004740 4.1e-70 268.9 144 91.0
FAN06G1180 Fragaria x ananassa HOM05D003984 ORTHO05D004740 3.0e-60 236.1 157 73.9
AagrBONN_evm.TU.Sc2ySwM_344.1695 Anthoceros agrestis HOM05D003984 ORTHO05D004740 1.4e-41 174.1 212 50.0
Pp3c14_5580 Physcomitrium patens HOM05D003984 ORTHO05D004740 2.2e-39 166.8 264 40.2
Mapoly0066s0078 Marchantia polymorpha HOM05D003984 ORTHO05D004740 2.4e-38 163.3 148 56.8
SEGI_35779 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 1.7e-36 157.1 230 44.8
Cpa.g.sc1.281 Carica papaya HOM05D003984 ORTHO05D004740 6.9e-33 145.2 106 68.9
FAN06G2469 Fragaria x ananassa HOM05D003984 ORTHO05D004740 9.3e-30 134.8 74 93.2
TAR624G0784 Trochodendron aralioides HOM05D003984 ORTHO05D004740 3.5e-29 132.9 93 71.0
Actinidia29191 Actinidia chinensis HOM05D003984 ORTHO05D004740 1.3e-28 131.0 106 66.0
CBR_g37750 Chara braunii HOM05D000019 ORTHO05D000002 3.3e-27 126.3 231 39.8
SEGI_13922 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 6.9e-25 118.6 76 77.6
SMO356G0399 Selaginella moellendorffii HOM05D003984 ORTHO05D004740 1.3e-18 97.8 176 37.5
CBR_g10977 Chara braunii HOM05D003984 ORTHO05D004740 1.2e-16 91.3 178 33.7
AUR62035988 Chenopodium quinoa HOM05D003984 ORTHO05D004740 3.2e-14 83.2 50 76.0
CSS0046661 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 7.9e-13 78.6 40 90.0
HanXRQChr17g0557371 Helianthus annuus HOM05D000549 ORTHO05D004740 1.9e-11 73.9 40 77.5
Nn6g33815 Nelumbo nucifera HOM05D003984 ORTHO05D004740 2.1e-10 70.5 40 77.5
RcHm_v2.0_Chr2g0140211 Rosa chinensis HOM05D003984 ORTHO05D004740 4.8e-10 69.3 43 69.8
PRCOL_00000040 Prasinoderma coloniale HOM05D003984 ORTHO05D004740 2.6e-08 63.5 138 34.1
SHI42769 Sapria himalayana HOM05D003984 ORTHO05D004740 4.5e-08 62.8 55 60.0
MCO05G642 Micromonas commoda HOM05D003984 ORTHO05D004740 1.0e-07 61.6 86 34.9
Sabra18G0026300 Salix brachista HOM05D002732 ORTHO05D002955 1.1e-06 58.2 32 90.6


User provided reference genes

Program Settings