Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004103g0010 Nicotiana tabacum HOM05D005938 ORTHO05D007654 6.1e-177 624.0 311 100.0
Nitab4.5_0002257g0140 Nicotiana tabacum HOM05D005938 ORTHO05D007654 8.0e-169 597.0 339 89.1
Peaxi162Scf00274g00846 Petunia axillaris HOM05D005938 ORTHO05D007654 5.1e-155 551.2 309 89.0
PGSC0003DMG400000598 Solanum tuberosum HOM05D005938 ORTHO05D007654 2.8e-153 545.4 306 88.9
Solyc03g116330.3 Solanum lycopersicum HOM05D005938 ORTHO05D007654 4.0e-152 541.6 306 88.2
CAN.G407.117 Capsicum annuum HOM05D005938 ORTHO05D007654 4.4e-151 538.1 306 87.6
Sopen03g035260 Solanum pennellii HOM05D005938 ORTHO05D007654 9.6e-130 467.2 253 90.5
CSS0017360 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 8.2e-121 437.6 313 70.0
CSS0040883 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 8.2e-121 437.6 313 70.0
Sc10g0009920 Simmondsia chinensis HOM05D005938 ORTHO05D007654 1.1e-117 427.2 316 68.7
Lj1g0012745 Lotus japonicus HOM05D005938 ORTHO05D007654 3.5e-116 422.2 302 69.9
Actinidia34992 Actinidia chinensis HOM05D005938 ORTHO05D007654 1.3e-115 420.2 315 67.9
QL10p016543 Quercus lobata HOM05D005938 ORTHO05D007654 1.8e-115 419.9 301 70.1
Cc04_g16920 Coffea canephora HOM05D005938 ORTHO05D007654 1.1e-114 417.2 311 67.8
TAR374G0085 Trochodendron aralioides HOM05D005938 ORTHO05D007654 1.9e-114 416.4 309 68.3
Atru.chr9.2268 Acer truncatum HOM05D005938 ORTHO05D007654 3.3e-114 415.6 305 68.5
Glyma.06G192800 Glycine max HOM05D005938 ORTHO05D007654 9.7e-114 414.1 304 70.1
GSVIVG01008024001 Vitis vinifera HOM05D005938 ORTHO05D007654 2.2e-113 412.9 311 69.1
CsaV3_1G002270 Cucumis sativus L. HOM05D005938 ORTHO05D007654 3.1e-112 409.1 295 70.2
Lj9A462G75 Lonicera japonica HOM05D005938 ORTHO05D007654 6.9e-112 407.9 283 69.6
MSTRG.9633 Avicennia marina HOM05D005938 ORTHO05D007654 1.5e-111 406.8 303 67.0
Ciclev10021191m.g Citrus clementina HOM05D005938 ORTHO05D007654 2.6e-111 406.0 308 67.9
Sed0010411 Sechium edule HOM05D005938 ORTHO05D007654 2.6e-111 406.0 297 69.7
CiPaw.11G042800 Carya illinoinensis HOM05D005938 ORTHO05D007654 5.9e-111 404.8 302 67.5
arahy.Tifrunner.gnm1.ann1.VVHC1U Arachis hypogaea HOM05D005938 ORTHO05D007654 2.9e-110 402.5 314 64.6
Lalb_Chr08g0235801 Lupinus albus HOM05D005938 ORTHO05D007654 3.8e-110 402.1 303 67.3
MELO3C017167.2 Cucumis melo HOM05D005938 ORTHO05D007654 1.9e-109 399.8 295 69.2
Ca_13688_v3 Cicer arietinum L. HOM05D005938 ORTHO05D007654 5.5e-109 398.3 303 66.3
Nn3g17204 Nelumbo nucifera HOM05D005938 ORTHO05D007654 5.5e-109 398.3 294 67.3
Phvul.009G188150 Phaseolus vulgaris HOM05D005938 ORTHO05D007654 5.5e-109 398.3 308 66.9
Eucgr.A02632 Eucalyptus grandis HOM05D005938 ORTHO05D007654 1.2e-108 397.1 301 66.8
Rhsim12G0157100 Rhododendron simsii HOM05D005938 ORTHO05D007654 1.6e-108 396.7 302 67.2
Cfa018959 Carpinus fangiana HOM05D005938 ORTHO05D007654 2.1e-108 396.4 264 74.2
TPR.G11812 Trifolium pratense HOM05D005938 ORTHO05D007654 2.7e-108 396.0 306 65.0
arahy.Tifrunner.gnm1.ann1.KGI6NM Arachis hypogaea HOM05D005938 ORTHO05D007654 4.6e-108 395.2 318 62.6
PSO063G3647 Papaver somniferum HOM05D005938 ORTHO05D007654 6.1e-108 394.8 300 67.3
Lsat_1_v5_gn_5_19401 Lactuca sativa HOM05D005938 ORTHO05D007654 7.9e-108 394.4 307 65.5
TWI15G1099 Tripterygium wilfordii HOM05D005938 ORTHO05D007654 7.9e-108 394.4 263 73.4
COL.COLO4_24542 Corchorus olitorius HOM05D005938 ORTHO05D007654 1.4e-107 393.7 272 72.8
ECA246G4427 Erigeron canadensis HOM05D005938 ORTHO05D007654 3.9e-107 392.1 311 64.3
Migut.D01830 Erythranthe guttata HOM05D005938 ORTHO05D007654 3.9e-107 392.1 297 67.0
PGR083G1660 Punica granatum HOM05D005938 ORTHO05D007654 5.1e-107 391.7 314 64.3
TAR622G1433 Trochodendron aralioides HOM05D005938 ORTHO05D007654 5.1e-107 391.7 264 73.1
Gohir.D12G179280 Gossypium hirsutum HOM05D005938 ORTHO05D007654 6.7e-107 391.3 314 64.6
Prupe.5G190900 Prunus persica HOM05D005938 ORTHO05D007654 8.8e-107 391.0 306 63.7
HanXRQChr05g0158101 Helianthus annuus HOM05D005938 ORTHO05D007654 1.5e-106 390.2 311 65.0
Hund09357 Selenicereus undatus HOM05D005938 ORTHO05D007654 2.5e-106 389.4 314 64.3
vmacro16554 Vaccinium macrocarpon HOM05D005938 ORTHO05D007654 4.3e-106 388.7 345 60.9
CANSAT80G1410 Cannabis sativa HOM05D005938 ORTHO05D007654 7.4e-106 387.9 300 64.0
Sabra18G0045600 Salix brachista HOM05D005938 ORTHO05D007654 1.7e-105 386.7 264 73.5
Gohir.A12G176500 Gossypium hirsutum HOM05D005938 ORTHO05D007654 2.8e-105 386.0 315 63.5
Potri.018G047400 Populus trichocarpa HOM05D005938 ORTHO05D007654 3.7e-105 385.6 278 70.9
SalBow7G2600 Salvia bowleyana HOM05D005938 ORTHO05D007654 6.3e-105 384.8 305 64.3
CARHR067810 Cardamine hirsuta HOM05D005938 ORTHO05D007654 1.5e-103 380.2 314 62.7
MD14G1198100 Malus domestica HOM05D005938 ORTHO05D007654 2.0e-103 379.8 307 61.9
Sp5g29710 Schrenkiella parvula HOM05D005938 ORTHO05D007654 2.0e-103 379.8 313 62.6
Carub.0002s2133 Capsella rubella HOM05D005938 ORTHO05D007654 3.4e-103 379.0 309 63.4
AL2G34410 Arabidopsis lyrata HOM05D005938 ORTHO05D007654 1.0e-102 377.5 309 62.1
DCAR_021525 Daucus carota HOM05D005938 ORTHO05D007654 1.0e-102 377.5 281 66.2
MD06G1191700 Malus domestica HOM05D005938 ORTHO05D007654 1.0e-102 377.5 305 63.0
Oeu016169.1 Olea europaea HOM05D005938 ORTHO05D007654 1.7e-102 376.7 262 72.1
A07p40340 Brassica napus HOM05D005938 ORTHO05D007654 2.9e-102 375.9 311 62.1
Thhalv10018904m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 5.0e-102 375.2 308 63.3
BcaC08g46886 Brassica carinata HOM05D005938 ORTHO05D007654 8.5e-102 374.4 311 61.7
Atru.BG.195.p Acer truncatum HOM05D005938 ORTHO05D007654 1.1e-101 374.0 254 72.4
ClCG06G016260 Citrullus lanatus HOM05D005938 ORTHO05D007654 1.4e-101 373.6 295 66.1
Ah.02g113360 Amaranthus hybridus HOM05D005938 ORTHO05D007654 3.2e-101 372.5 264 68.9
EL10Ac5g10981 Beta vulgaris HOM05D005938 ORTHO05D007654 3.2e-101 372.5 265 69.4
FAN08G1160 Fragaria x ananassa HOM05D005938 ORTHO05D007654 4.7e-100 368.6 305 61.6
AUR62021711 Chenopodium quinoa HOM05D005938 ORTHO05D007654 1.0e-99 367.5 263 68.8
FvH4_5g15170 Fragaria vesca HOM05D005938 ORTHO05D007654 1.8e-99 366.7 304 61.5
RcHm_v2.0_Chr7g0181011 Rosa chinensis HOM05D005938 ORTHO05D007654 3.0e-99 365.9 302 62.6
Cpa.g.c30141.1 Carica papaya HOM05D005938 ORTHO05D007654 3.9e-99 365.5 261 69.3
BraA07t31575Z Brassica rapa HOM05D005938 ORTHO05D007654 8.8e-99 364.4 334 58.1
THA.LOC104812546 Tarenaya hassleriana HOM05D005938 ORTHO05D007654 4.4e-98 362.1 307 61.6
BcaC08g46988 Brassica carinata HOM05D005938 ORTHO05D007654 2.8e-97 359.4 296 60.5
AUR62008387 Chenopodium quinoa HOM05D005938 ORTHO05D007654 2.8e-97 359.4 263 67.3
FAN13G2109 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.8e-97 359.4 298 62.1
Duzib205G1012 Durio zibethinus HOM05D005938 ORTHO05D007654 1.4e-96 357.1 311 62.7
FAN18G0122 Fragaria x ananassa HOM05D005938 ORTHO05D007654 2.4e-96 356.3 298 61.4
Thecc.03G084300 Theobroma cacao HOM05D005938 ORTHO05D007654 1.2e-95 354.0 308 62.3
SGA_v2.0_scaffold114G31898 Striga asiatica HOM05D005938 ORTHO05D007654 2.2e-94 349.7 299 61.5
unitig_744.g24387 Utricularia gibba HOM05D005938 ORTHO05D007654 6.5e-94 348.2 298 59.4
ATR0564G381 Amborella trichopoda HOM05D005938 ORTHO05D007654 1.2e-92 344.0 266 63.9
FAN04G0099 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.6e-92 343.6 294 60.9
Aqoxy3G03351 Aquilegia oxysepala HOM05D005938 ORTHO05D007654 2.7e-92 342.8 263 66.5
Dinv38693 Davidia involucrata HOM05D005938 ORTHO05D007654 8.0e-92 341.3 251 68.5
Gorai.008G192300 Gossypium raimondii HOM05D005938 ORTHO05D007654 5.2e-91 338.6 302 59.9
Os08g0171000 Oryza sativa ssp. japonica HOM05D005938 ORTHO05D007654 6.7e-91 338.2 265 62.3
Psat5g187160 Pisum sativum HOM05D005938 ORTHO05D007654 5.7e-90 335.1 268 63.8
Manes.06G094000 Manihot esculenta HOM05D005938 ORTHO05D007654 1.7e-89 333.6 304 58.9
Aa31LG7G3570 Aethionema arabicum HOM05D005938 ORTHO05D007654 4.8e-89 332.0 297 57.9
CDE02G0021 Ceratophyllum demersum HOM05D005938 ORTHO05D007654 6.3e-89 331.6 275 59.3
SEGI_36934 Sequoiadendron giganteum HOM05D005938 ORTHO05D007654 1.2e-87 327.4 301 56.8
C06p48680 Brassica napus HOM05D005938 ORTHO05D007654 1.0e-83 314.3 260 61.2
BcaC08g46884 Brassica carinata HOM05D005938 ORTHO05D007654 7.5e-82 308.1 290 56.6
Mapoly0002s0073 Marchantia polymorpha HOM05D005938 ORTHO05D007654 6.5e-78 295.0 264 54.5
Aa31LG4G4790 Aethionema arabicum HOM05D005938 ORTHO05D007654 7.2e-77 291.6 244 58.6
AT1G74530 Arabidopsis thaliana HOM05D005938 ORTHO05D007654 9.4e-77 291.2 257 60.7
BolC6t39901H Brassica oleracea HOM05D005938 ORTHO05D007654 9.4e-77 291.2 267 58.1
SHI04241 Sapria himalayana HOM05D005938 ORTHO05D007654 1.8e-75 287.0 349 46.4
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 3.0e-75 286.2 376 47.9
CSS0050188 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 6.3e-73 278.5 207 71.0
Medtr0036s0320 Medicago truncatula HOM05D005938 ORTHO05D007654 3.3e-69 266.2 190 66.3
Pp3c17_15280 Physcomitrium patens HOM05D005938 ORTHO05D007654 2.3e-67 260.0 272 50.0
Hma1.2p1_0735F.1_g210490 Hydrangea macrophylla HOM05D005938 ORTHO05D007654 1.7e-65 253.8 163 74.2
SMO270G0117 Selaginella moellendorffii HOM05D005938 ORTHO05D007654 3.9e-62 242.7 260 49.6
VMungo1309G2195 Vigna mungo HOM05D005938 ORTHO05D007654 2.8e-60 236.5 176 67.6
AagrBONN_evm.TU.Sc2ySwM_117.1670 Anthoceros agrestis HOM05D005938 ORTHO05D007654 4.7e-60 235.7 261 48.3
CBR_g66809 Chara braunii HOM05D005938 ORTHO05D007654 2.6e-58 229.9 269 43.5
MBI02_g23681_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 1.3e-57 227.6 164 70.7
FAN10G3346 Fragaria x ananassa HOM05D005938 ORTHO05D007654 1.2e-50 204.5 146 68.5
Glyma.04G170700 Glycine max HOM05D005938 ORTHO05D007654 7.5e-50 201.8 156 66.7
Zm00001eb415000 Zea mays HOM05D005938 ORTHO05D007654 1.5e-45 187.6 227 48.0
arahy.Tifrunner.gnm1.ann1.518D86 Arachis hypogaea HOM05D005938 ORTHO05D007654 3.4e-34 149.8 144 53.5
MCO16G029 Micromonas commoda HOM05D005938 ORTHO05D007654 7.1e-32 142.1 277 33.9
MBI15_g27838_MAGBIO Magnolia biondii HOM05D005938 ORTHO05D007654 3.0e-30 136.7 163 49.7
Medtr3g040450 Medicago truncatula HOM05D005938 ORTHO05D007654 4.3e-29 132.9 116 61.2
QL07p001114 Quercus lobata HOM05D005938 ORTHO05D007654 2.8e-28 130.2 168 47.6
VMungo0019G0001 Vigna mungo HOM05D005938 ORTHO05D007654 4.8e-28 129.4 189 46.0
CSS0038577 Camellia sinensis var. sinensis HOM05D005938 ORTHO05D007654 5.3e-27 125.9 84 67.9
PRCOL_00003564 Prasinoderma coloniale HOM05D005938 ORTHO05D007654 2.2e-25 120.6 287 33.1
Cre12.g513300 Chlamydomonas reinhardtii HOM05D005938 ORTHO05D007654 2.1e-23 114.0 210 36.7
FAN01G1759 Fragaria x ananassa HOM05D005938 ORTHO05D007654 4.6e-23 112.8 94 57.4
Prupe.5G190800 Prunus persica HOM05D005938 ORTHO05D007654 1.3e-22 111.3 83 63.9
QL02p071402 Quercus lobata HOM05D005938 ORTHO05D028155 3.3e-21 106.7 77 64.9
MD17G1094500 Malus domestica HOM05D005938 ORTHO05D007654 7.3e-21 105.5 79 63.3
QL12p034017 Quercus lobata HOM05D000176 ORTHO05D000106 1.3e-20 104.8 68 70.6
FAN18G0131 Fragaria x ananassa HOM05D005938 ORTHO05D007654 9.9e-18 95.1 74 63.5
Thhalv10000377m.g Eutrema salsugineum HOM05D005938 ORTHO05D007654 1.8e-06 57.8 92 38.0


User provided reference genes

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