Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004101g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-69 265.4 131 100.0
Nitab4.5_0004118g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.5e-19 97.8 239 34.7
Nitab4.5_0001757g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-17 92.4 126 47.6
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-16 90.5 57 73.7
Nitab4.5_0001286g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.9e-16 88.6 56 73.2
Nitab4.5_0000638g0160 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-16 88.2 138 43.5
Nitab4.5_0003102g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.7e-16 87.4 66 65.2
Nitab4.5_0002590g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-15 86.3 57 73.7
Nitab4.5_0001667g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.7e-15 84.7 58 69.0
Nitab4.5_0003601g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-14 82.0 57 66.7
Nitab4.5_0000099g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.2e-14 80.9 143 36.4
Nitab4.5_0000715g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-13 79.7 70 58.6
Nitab4.5_0002966g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-13 79.3 118 42.4
Nitab4.5_0005065g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-13 79.3 55 67.3
Nitab4.5_0000242g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-13 79.0 204 33.3
Nitab4.5_0000372g0090 Nicotiana tabacum HOM05D014359 ORTHO05D000007 5.3e-13 78.2 57 64.9
Nitab4.5_0001676g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.3e-13 78.2 106 48.1
Nitab4.5_0002004g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.0e-13 77.4 57 63.2
Nitab4.5_0002909g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-12 77.0 51 70.6
Nitab4.5_0001783g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-12 75.9 57 64.9
Nitab4.5_0000805g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-12 74.7 51 72.5
Nitab4.5_0005560g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.6e-12 74.3 51 68.6
CAN.G1139.21 Capsicum annuum HOM05D000024 ORTHO05D000007 1.7e-11 73.2 57 61.4
Nitab4.5_0001383g0060 Nicotiana tabacum HOM05D016244 ORTHO05D000007 2.2e-11 72.8 52 73.1
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.9e-11 72.4 56 58.9
Nitab4.5_0001124g0090 Nicotiana tabacum HOM05D023645 ORTHO05D000007 5.0e-11 71.6 57 59.6
Nitab4.5_0003236g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.5e-11 71.2 47 72.3
Nitab4.5_0008161g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.4e-11 70.9 140 32.9
Nitab4.5_0002924g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.1e-10 70.5 44 75.0
Nitab4.5_0003284g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-10 70.5 56 58.9
Nitab4.5_0000002g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-10 70.1 56 57.1
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-10 70.1 56 55.4
Nitab4.5_0004658g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-10 70.1 56 55.4
Nitab4.5_0000541g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-10 69.7 57 61.4
Nitab4.5_0002045g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-10 69.7 56 58.9
Nitab4.5_0003185g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-10 69.7 69 50.7
Nitab4.5_0005517g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-10 69.7 57 59.6
Nitab4.5_0001907g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-10 69.3 56 57.1
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-10 69.3 57 56.1
Nitab4.5_0005810g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-10 69.3 38 81.6
Nitab4.5_0025440g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-10 68.9 47 68.1
Nitab4.5_0000045g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.2e-10 68.6 57 54.4
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.2e-10 68.6 57 57.9
Nitab4.5_0003810g0050 Nicotiana tabacum HOM05D011951 ORTHO05D000007 4.2e-10 68.6 56 60.7
Nitab4.5_0000274g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.5e-10 68.2 56 58.9
Nitab4.5_0000961g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.5e-10 68.2 56 53.6
Nitab4.5_0000677g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.2e-10 67.8 57 56.1
Nitab4.5_0001307g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.2e-10 67.8 52 59.6
Nitab4.5_0002698g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.2e-10 67.8 50 66.0
Nitab4.5_0000063g0330 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.3e-10 67.4 54 57.4
Nitab4.5_0000092g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.3e-10 67.4 57 57.9
Nitab4.5_0000575g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.3e-10 67.4 56 53.6
Nitab4.5_0004280g0050 Nicotiana tabacum HOM05D016244 ORTHO05D000007 9.3e-10 67.4 44 75.0
Nitab4.5_0006879g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.3e-10 67.4 39 79.5
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-09 67.0 66 47.0
Nitab4.5_0003071g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-09 67.0 120 36.7
Nitab4.5_0009190g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-09 67.0 56 53.6
Nitab4.5_0000008g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-09 66.6 56 58.9
Nitab4.5_0000149g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-09 66.6 57 57.9
Nitab4.5_0002170g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-09 66.6 59 59.3
Nitab4.5_0002414g0080 Nicotiana tabacum HOM05D011951 ORTHO05D000007 2.1e-09 66.2 56 55.4
Nitab4.5_0005100g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-09 66.2 57 57.9
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-09 66.2 57 57.9
Nitab4.5_0000244g0210 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-09 65.9 57 54.4
Nitab4.5_0000357g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-09 65.9 56 57.1
Nitab4.5_0000465g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-09 65.9 56 53.6
Nitab4.5_0002157g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-09 65.9 39 71.8
Nitab4.5_0004123g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-09 65.9 47 66.0
Nitab4.5_0006194g0020 Nicotiana tabacum HOM05D012219 ORTHO05D000007 2.7e-09 65.9 56 51.8
Nitab4.5_0007825g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-09 65.9 56 53.6
Nitab4.5_0000175g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-09 65.5 53 62.3
Nitab4.5_0000481g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-09 65.5 39 71.8
Nitab4.5_0001980g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-09 65.5 57 59.6
Nitab4.5_0002117g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-09 65.5 57 54.4
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-09 65.5 56 50.0
Nitab4.5_0009562g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-09 65.5 58 58.6
Nitab4.5_0002061g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.6e-09 65.1 49 59.2
Nitab4.5_0007450g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.6e-09 65.1 56 50.0
Peaxi162Scf00460g00041 Petunia axillaris HOM05D000024 ORTHO05D000007 4.6e-09 65.1 56 53.6
Nitab4.5_0005284g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-09 64.7 56 50.0
Nitab4.5_0000032g0500 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.9e-09 64.3 52 65.4
Nitab4.5_0000098g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.9e-09 64.3 56 55.4
Nitab4.5_0000848g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-08 63.9 127 40.9
Nitab4.5_0000087g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-08 63.5 51 58.8
Nitab4.5_0003397g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-08 63.5 54 51.9
Nitab4.5_0003940g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-08 63.5 56 53.6
Nitab4.5_0011088g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-08 63.2 56 51.8
Nitab4.5_0025326g0010 Nicotiana tabacum HOM05D012219 ORTHO05D000007 1.8e-08 63.2 51 56.9
Nitab4.5_0000234g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-08 62.8 57 57.9
Nitab4.5_0000721g0270 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-08 62.8 56 53.6
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-08 62.8 56 53.6
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-08 62.8 56 48.2
Nitab4.5_0007752g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-08 62.8 56 51.8
Nitab4.5_0016046g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-08 62.4 45 62.2
Nitab4.5_0000164g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-08 61.6 44 61.4
Nitab4.5_0001580g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-08 61.6 56 55.4
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-08 61.6 57 54.4
Nitab4.5_0015200g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.1e-08 61.6 123 35.0
Nitab4.5_0000370g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-08 61.2 44 59.1
Nitab4.5_0000654g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-08 61.2 56 55.4
Nitab4.5_0006435g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.7e-08 60.8 56 51.8
Nitab4.5_0002416g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-07 60.5 44 59.1
Nitab4.5_0003729g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-07 60.5 57 50.9
Nitab4.5_0009471g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-07 60.5 51 54.9
Nitab4.5_0000847g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-07 60.1 57 50.9
Nitab4.5_0002164g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-07 60.1 52 51.9
Nitab4.5_0002284g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-07 60.1 59 47.5
Nitab4.5_0004401g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-07 60.1 56 55.4
Nitab4.5_0000102g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-07 59.7 53 54.7
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-07 59.7 56 51.8
Nitab4.5_0003605g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-07 59.7 57 56.1
Nitab4.5_0003500g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-07 59.3 52 53.8
Nitab4.5_0004489g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-07 59.3 53 54.7
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-07 58.9 57 50.9
Nitab4.5_0000355g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-07 58.9 57 50.9
Nitab4.5_0001544g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-07 58.9 155 30.3
Nitab4.5_0000818g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-07 58.5 57 49.1
Nitab4.5_0009312g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.3e-07 58.5 44 56.8
Nitab4.5_0015860g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.3e-07 58.5 33 78.8
Nitab4.5_0003255g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.7e-07 58.2 56 51.8
Peaxi162Scf00118g00217 Petunia axillaris HOM05D000024 ORTHO05D000007 5.7e-07 58.2 56 53.6
PGSC0003DMG400027601 Solanum tuberosum HOM05D000024 ORTHO05D000007 5.7e-07 58.2 56 48.2
Nitab4.5_0000068g0350 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.4e-07 57.8 56 50.0
Nitab4.5_0000952g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.4e-07 57.8 40 62.5
Nitab4.5_0003178g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.4e-07 57.8 57 49.1
Nitab4.5_0009838g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.4e-07 57.8 57 56.1
Nitab4.5_0013531g0010 Nicotiana tabacum HOM05D014359 ORTHO05D000007 7.4e-07 57.8 33 78.8
Nitab4.5_0000023g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.7e-07 57.4 65 43.1
Nitab4.5_0006719g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.7e-07 57.4 54 46.3
Nitab4.5_0000457g0440 Nicotiana tabacum HOM05D011002 ORTHO05D000007 1.3e-06 57.0 50 48.0
Nitab4.5_0000659g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-06 57.0 57 54.4
Nitab4.5_0002591g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-06 57.0 62 45.2
Nitab4.5_0006711g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-06 57.0 56 48.2
Nitab4.5_0000993g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-06 56.6 55 50.9
Nitab4.5_0003241g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-06 56.6 59 45.8
Nitab4.5_0005246g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-06 56.6 57 47.4
Nitab4.5_0007204g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-06 56.6 43 60.5
Nitab4.5_0000022g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 56.2 45 55.6
Nitab4.5_0003260g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-06 56.2 47 53.2
Nitab4.5_0003516g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.8e-06 55.8 44 56.8
Nitab4.5_0000103g0250 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-06 55.5 57 56.1
Nitab4.5_0002438g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-06 55.5 47 53.2
Nitab4.5_0003921g0010 Nicotiana tabacum HOM05D014359 ORTHO05D000007 4.8e-06 55.1 33 75.8
Nitab4.5_0005584g0050 Nicotiana tabacum HOM05D000077 ORTHO05D000339 4.8e-06 55.1 57 52.6
Nitab4.5_0003347g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.3e-06 54.7 55 49.1
Nitab4.5_0007986g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.3e-06 54.7 56 51.8
Solyc09g059390.2 Solanum lycopersicum HOM05D000024 ORTHO05D000007 6.3e-06 54.7 56 51.8
Nitab4.5_0002249g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.2e-06 54.3 44 52.3
Nitab4.5_0015178g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.2e-06 54.3 39 56.4


User provided reference genes

Program Settings