Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004093g0010 Nicotiana tabacum HOM05D005044 ORTHO05D006799 1.2e-212 743.0 400 100.0
Nitab4.5_0000393g0110 Nicotiana tabacum HOM05D005044 ORTHO05D006799 3.2e-202 708.4 393 97.5
Solyc10g045390.2 Solanum lycopersicum HOM05D005044 ORTHO05D006799 1.0e-184 650.2 392 91.8
Sopen10g015430 Solanum pennellii HOM05D005044 ORTHO05D006799 5.1e-184 647.9 392 91.3
Peaxi162Scf01826g00015 Petunia axillaris HOM05D005044 ORTHO05D006799 2.1e-169 599.4 387 86.0
MSTRG.17471 Avicennia marina HOM05D005044 ORTHO05D006799 6.3e-166 587.8 394 81.7
Migut.N02179 Erythranthe guttata HOM05D005044 ORTHO05D006799 1.2e-164 583.6 394 80.7
Lsat_1_v5_gn_9_8160 Lactuca sativa HOM05D005044 ORTHO05D006799 1.7e-163 579.7 390 81.8
Lj1A57T46 Lonicera japonica HOM05D005044 ORTHO05D006799 7.2e-162 574.3 392 83.2
Dinv22487 Davidia involucrata HOM05D005044 ORTHO05D006799 1.6e-161 573.2 388 82.5
HanXRQChr10g0281481 Helianthus annuus HOM05D005044 ORTHO05D006799 2.3e-160 569.3 394 81.7
TAR365G0173 Trochodendron aralioides HOM05D005044 ORTHO05D006799 2.3e-160 569.3 395 81.0
Dinv34561 Davidia involucrata HOM05D005044 ORTHO05D006799 1.5e-159 566.6 384 83.3
Prupe.8G232900 Prunus persica HOM05D005044 ORTHO05D006799 3.3e-159 565.5 395 80.3
MD10G1193500 Malus domestica HOM05D005044 ORTHO05D006799 5.7e-159 564.7 395 80.8
SGA_v2.0_scaffold80G25918 Striga asiatica HOM05D005044 ORTHO05D006799 1.1e-157 560.5 389 79.4
CSS0043243 Camellia sinensis var. sinensis HOM05D005044 ORTHO05D006799 9.1e-157 557.4 391 80.6
Actinidia24932 Actinidia chinensis HOM05D005044 ORTHO05D006799 1.0e-155 553.9 385 80.0
Nn1g02531 Nelumbo nucifera HOM05D005044 ORTHO05D006799 8.5e-155 550.8 399 78.9
RcHm_v2.0_Chr6g0289651 Rosa chinensis HOM05D005044 ORTHO05D006799 1.5e-154 550.1 393 80.2
FvH4_2g22590 Fragaria vesca HOM05D005044 ORTHO05D006799 2.5e-154 549.3 394 80.7
FAN24G0661 Fragaria x ananassa HOM05D005044 ORTHO05D006799 2.5e-154 549.3 394 80.7
FAN15G1010 Fragaria x ananassa HOM05D005044 ORTHO05D006799 1.2e-153 547.0 394 80.2
QL12p042617 Quercus lobata HOM05D005044 ORTHO05D006799 1.6e-153 546.6 405 74.6
Sc05g0001060 Simmondsia chinensis HOM05D005044 ORTHO05D006799 4.0e-152 542.0 395 75.7
Cpa.g.sc52.102 Carica papaya HOM05D005044 ORTHO05D006799 2.0e-151 539.7 413 77.0
Ciclev10019527m.g Citrus clementina HOM05D005044 ORTHO05D006799 2.6e-151 539.3 400 79.2
FAN20G1248 Fragaria x ananassa HOM05D005044 ORTHO05D006799 3.3e-151 538.9 396 79.5
FAN27G2477 Fragaria x ananassa HOM05D005044 ORTHO05D006799 3.3e-151 538.9 396 79.5
Glyma.19G160700 Glycine max HOM05D005044 ORTHO05D006799 3.3e-151 538.9 386 80.6
Lj1g0021498 Lotus japonicus HOM05D005044 ORTHO05D006799 3.3e-151 538.9 394 78.7
MELO3C007015.2 Cucumis melo HOM05D005044 ORTHO05D006799 7.5e-151 537.7 405 75.8
MBI04_g08415_MAGBIO Magnolia biondii HOM05D005044 ORTHO05D006799 7.5e-151 537.7 401 74.8
CsaV3_6G052930 Cucumis sativus L. HOM05D005044 ORTHO05D006799 2.2e-150 536.2 405 75.6
VMungo1383G1961 Vigna mungo HOM05D005044 ORTHO05D006799 1.1e-149 533.9 385 81.6
Phvul.001G156000 Phaseolus vulgaris HOM05D005044 ORTHO05D006799 2.4e-149 532.7 385 80.5
Atru.chr5.1554 Acer truncatum HOM05D005044 ORTHO05D006799 5.3e-149 531.6 402 75.9
Psat3g061080 Pisum sativum HOM05D005044 ORTHO05D006799 1.6e-148 530.0 388 79.4
Aqoxy2G03504 Aquilegia oxysepala HOM05D005044 ORTHO05D006799 2.0e-148 529.6 406 74.6
Glyma.03G158300 Glycine max HOM05D005044 ORTHO05D006799 5.9e-148 528.1 396 79.3
Ca_08641_v3 Cicer arietinum L. HOM05D005044 ORTHO05D006799 7.7e-148 527.7 389 79.7
Haze_24523 Corylus avellana HOM05D005044 ORTHO05D006799 5.0e-147 525.0 405 74.1
DCAR_018443 Daucus carota HOM05D005044 ORTHO05D006799 4.2e-146 521.9 380 76.1
Medtr7g096040 Medicago truncatula HOM05D005044 ORTHO05D006799 6.1e-145 518.1 387 77.0
Potri.005G217400 Populus trichocarpa HOM05D005044 ORTHO05D006799 8.0e-145 517.7 404 74.3
TPR.G19106 Trifolium pratense HOM05D005044 ORTHO05D006799 8.0e-145 517.7 350 78.6
Potri.002G045900 Populus trichocarpa HOM05D005044 ORTHO05D006799 3.0e-144 515.8 402 76.4
Cfa002318 Carpinus fangiana HOM05D005044 ORTHO05D006799 5.7e-143 511.5 408 71.8
Lalb_Chr25g0290121 Lupinus albus HOM05D005044 ORTHO05D006799 7.5e-143 511.1 371 76.3
TWI12G0479 Tripterygium wilfordii HOM05D005044 ORTHO05D006799 7.5e-143 511.1 415 73.5
Sp5g07850 Schrenkiella parvula HOM05D005044 ORTHO05D006799 3.7e-142 508.8 412 69.2
PSO832G0444 Papaver somniferum HOM05D005044 ORTHO05D006799 6.3e-142 508.1 402 68.9
ClCG01G025700 Citrullus lanatus HOM05D005044 ORTHO05D006799 2.4e-141 506.1 453 67.1
Thhalv10010247m.g Eutrema salsugineum HOM05D005044 ORTHO05D006799 1.2e-140 503.8 412 69.7
Eucgr.K03316 Eucalyptus grandis HOM05D005044 ORTHO05D006799 1.6e-140 503.4 357 75.1
THA.LOC104804692 Tarenaya hassleriana HOM05D005044 ORTHO05D006799 1.6e-140 503.4 412 71.1
Manes.01G202300 Manihot esculenta HOM05D005044 ORTHO05D006799 2.0e-140 503.1 412 73.8
Sed0025057 Sechium edule HOM05D005044 ORTHO05D006799 3.5e-140 502.3 404 72.8
PGR044G0510 Punica granatum HOM05D005044 ORTHO05D006799 5.9e-140 501.5 414 72.7
Manes.05G083800 Manihot esculenta HOM05D005044 ORTHO05D006799 1.7e-139 500.0 410 73.9
CDE07G1918 Ceratophyllum demersum HOM05D005044 ORTHO05D006799 5.0e-139 498.4 392 71.2
ECA247G2181 Erigeron canadensis HOM05D005044 ORTHO05D006799 8.5e-139 497.7 399 73.7
Eucgr.K03317 Eucalyptus grandis HOM05D005044 ORTHO05D006799 2.5e-138 496.1 359 74.7
PSO210G5903 Papaver somniferum HOM05D005044 ORTHO05D006799 2.5e-138 496.1 396 68.4
Sabra05G0166600 Salix brachista HOM05D005044 ORTHO05D006799 4.2e-138 495.4 484 63.4
AT3G54610 Arabidopsis thaliana HOM05D005044 ORTHO05D006799 1.6e-137 493.4 412 68.0
AL5G35690 Arabidopsis lyrata HOM05D005044 ORTHO05D006799 1.8e-136 490.0 412 68.9
TWI75G1122 Tripterygium wilfordii HOM05D005044 ORTHO05D006799 1.8e-136 490.0 415 72.5
Gorai.007G141400 Gossypium raimondii HOM05D005044 ORTHO05D006799 4.0e-136 488.8 401 72.8
Carub.0005s2121 Capsella rubella HOM05D005044 ORTHO05D006799 6.8e-136 488.0 412 68.2
Duzib133G0403 Durio zibethinus HOM05D005044 ORTHO05D006799 8.8e-136 487.6 409 72.4
Gohir.A11G127000 Gossypium hirsutum HOM05D005044 ORTHO05D006799 1.2e-135 487.3 401 72.8
Gohir.D11G132200 Gossypium hirsutum HOM05D005044 ORTHO05D006799 1.2e-135 487.3 401 73.1
Aa31sc64G50 Aethionema arabicum HOM05D005044 ORTHO05D006799 2.2e-134 483.0 448 62.1
CiPaw.04G181200 Carya illinoinensis HOM05D005044 ORTHO05D006799 2.4e-133 479.6 299 82.6
Rhsim13G0030500 Rhododendron simsii HOM05D005044 ORTHO05D006799 7.0e-133 478.0 392 67.6
Thecc.01G268500 Theobroma cacao HOM05D005044 ORTHO05D006799 7.0e-133 478.0 407 71.0
COL.COLO4_06089 Corchorus olitorius HOM05D005044 ORTHO05D006799 7.7e-132 474.6 408 71.3
vmacro02624 Vaccinium macrocarpon HOM05D005044 ORTHO05D006799 1.9e-130 469.9 292 81.2
Hund09563 Selenicereus undatus HOM05D005044 ORTHO05D006799 6.1e-129 464.9 407 67.3
Lalb_Chr01g0019911 Lupinus albus HOM05D005044 ORTHO05D006799 3.0e-128 462.6 364 69.2
CARHR164510 Cardamine hirsuta HOM05D005044 ORTHO05D006799 4.4e-127 458.8 391 69.8
PSO210G1356 Papaver somniferum HOM05D005044 ORTHO05D006799 7.5e-127 458.0 370 69.5
HPP92_024856 Vanilla planifolia HOM05D005044 ORTHO05D006799 2.7e-124 449.5 404 68.6
A04p05210 Brassica napus HOM05D005044 ORTHO05D006799 4.6e-124 448.7 411 63.5
BraA04t16230Z Brassica rapa HOM05D005044 ORTHO05D006799 7.8e-124 448.0 411 63.5
Cc01_g18890 Coffea canephora HOM05D005044 ORTHO05D006799 1.0e-123 447.6 241 90.0
BcaC02g09057 Brassica carinata HOM05D005044 ORTHO05D006799 1.5e-122 443.7 415 64.3
ATR0665G603 Amborella trichopoda HOM05D005044 ORTHO05D006799 9.5e-122 441.0 371 66.6
BcaB01g00175 Brassica carinata HOM05D005044 ORTHO05D006799 1.6e-121 440.3 397 65.0
EL10Ac5g10465 Beta vulgaris HOM05D005044 ORTHO05D006799 3.6e-121 439.1 297 73.7
PSO461G0059 Papaver somniferum HOM05D005044 ORTHO05D006799 1.5e-119 433.7 369 66.9
AUR62011952 Chenopodium quinoa HOM05D005044 ORTHO05D006799 9.8e-119 431.0 236 85.2
BcaB02g08448 Brassica carinata HOM05D005044 ORTHO05D006799 3.7e-118 429.1 411 63.0
AUR62032265 Chenopodium quinoa HOM05D005044 ORTHO05D006799 3.7e-118 429.1 259 79.5
Os10g0415900 Oryza sativa ssp. japonica HOM05D005044 ORTHO05D006799 1.9e-117 426.8 287 74.6
BcaC02g09052 Brassica carinata HOM05D005044 ORTHO05D006799 2.7e-116 422.9 400 60.0
SHI09971 Sapria himalayana HOM05D005044 ORTHO05D006799 2.7e-116 422.9 359 67.1
C04p37940 Brassica napus HOM05D005044 ORTHO05D006799 6.0e-116 421.8 403 63.0
BolC4t25370H Brassica oleracea HOM05D005044 ORTHO05D006799 7.8e-116 421.4 403 62.3
GSVIVG01000712001 Vitis vinifera HOM05D005044 ORTHO05D006799 7.8e-116 421.4 217 91.2
A04p05170 Brassica napus HOM05D005044 ORTHO05D006799 5.0e-115 418.7 402 59.5
C04p37870 Brassica napus HOM05D005044 ORTHO05D006799 5.0e-115 418.7 400 59.5
BolC4t25361H Brassica oleracea HOM05D005044 ORTHO05D006799 5.0e-115 418.7 400 59.5
BraA04t16227Z Brassica rapa HOM05D005044 ORTHO05D006799 1.1e-114 417.5 402 61.9
unitig_22.g5955 Utricularia gibba HOM05D005044 ORTHO05D006799 2.5e-114 416.4 322 73.6
Rhsim01G0270400 Rhododendron simsii HOM05D005044 ORTHO05D006799 4.3e-114 415.6 513 54.6
Aqoxy5G00364 Aquilegia oxysepala HOM05D005044 ORTHO05D006799 1.2e-113 414.1 386 63.5
Medtr8g062330 Medicago truncatula HOM05D005044 ORTHO05D006799 2.6e-111 406.4 357 60.5
Pp3c2_9560 Physcomitrium patens HOM05D005044 ORTHO05D006799 1.6e-108 397.1 289 68.9
SEGI_32822 Sequoiadendron giganteum HOM05D005044 ORTHO05D006799 6.0e-108 395.2 401 55.9
SMO367G0544 Selaginella moellendorffii HOM05D005044 ORTHO05D006799 1.4e-104 384.0 263 70.7
Ah.11g050040 Amaranthus hybridus HOM05D005044 ORTHO05D006799 8.4e-102 374.8 201 88.6
Mapoly0187s0003 Marchantia polymorpha HOM05D005044 ORTHO05D006799 7.1e-101 371.7 248 72.6
CBR_g46433 Chara braunii HOM05D005044 ORTHO05D006799 2.7e-100 369.8 242 71.9
AagrBONN_evm.TU.Sc2ySwM_117.1037 Anthoceros agrestis HOM05D005044 ORTHO05D006799 6.0e-100 368.6 221 77.8
Zm00001eb223040 Zea mays HOM05D005044 ORTHO05D006799 6.2e-97 358.6 181 92.8
Oeu018178.1 Olea europaea HOM05D005044 ORTHO05D006799 8.7e-91 338.2 385 55.1
GSVIVG01000713001 Vitis vinifera HOM05D005044 ORTHO05D006799 3.5e-84 316.2 201 74.1
MCO07G152 Micromonas commoda HOM05D005044 ORTHO05D006799 1.3e-75 287.7 209 59.3
Cre06.g256200 Chlamydomonas reinhardtii HOM05D005044 ORTHO05D006799 9.6e-74 281.6 210 62.9
Sabra02G0036900 Salix brachista HOM05D005044 ORTHO05D006799 1.3e-67 261.2 274 68.2
Sabra02G0036800 Salix brachista HOM05D005044 ORTHO05D006799 6.7e-67 258.8 132 91.7
vmacro14878 Vaccinium macrocarpon HOM05D005044 ORTHO05D006799 1.3e-65 254.6 146 84.9
Cfa021827 Carpinus fangiana HOM05D005044 ORTHO05D006799 5.7e-58 229.2 195 53.3
vmacro14879 Vaccinium macrocarpon HOM05D005044 ORTHO05D006799 7.4e-58 228.8 162 74.1
PRCOL_00003272 Prasinoderma coloniale HOM05D005044 ORTHO05D006799 2.6e-55 220.3 209 50.7
Haze_26753 Corylus avellana HOM05D005044 ORTHO05D006799 1.1e-42 178.3 202 42.6
unitig_22.g5954 Utricularia gibba HOM05D005044 ORTHO05D006799 6.5e-30 136.0 73 84.9
BolC9t54871H Brassica oleracea HOM05D005044 ORTHO05D006799 4.1e-24 116.7 227 44.1
FAN07G0333 Fragaria x ananassa HOM05D005044 ORTHO05D020615 1.0e-22 112.1 61 88.5
BcaC04g22409 Brassica carinata HOM05D005044 ORTHO05D000065 5.0e-22 109.8 227 42.3
C09p19690 Brassica napus HOM05D005044 ORTHO05D006799 3.2e-21 107.1 226 42.0
FAN24G2420 Fragaria x ananassa HOM05D005044 ORTHO05D020615 2.0e-18 97.8 70 71.4
Actinidia04660 Actinidia chinensis HOM05D003696 ORTHO05D005158 4.5e-15 86.7 179 44.7
FvH4_4g08670 Fragaria vesca HOM05D005044 ORTHO05D006799 2.8e-12 77.4 54 68.5
Lsat_1_v5_gn_2_63120 Lactuca sativa HOM05D005044 ORTHO05D006799 4.7e-12 76.6 48 77.1
BcaC03g14692 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-11 74.7 196 37.8
BraA09t40212Z Brassica rapa HOM05D005044 ORTHO05D006799 3.0e-11 73.9 45 71.1
Dinv08224 Davidia involucrata HOM05D051781 ORTHO05D178724 2.9e-09 67.4 32 93.8
Ah.11g050050 Amaranthus hybridus HOM05D005044 ORTHO05D060978 1.7e-06 58.2 92 45.7


User provided reference genes

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