Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2195.6 1093 100.0
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 2086.6 1270 84.5
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 1987.2 1271 80.6
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 1985.3 1268 80.8
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 1984.5 1268 80.7
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 1983.8 1268 80.8
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 1845.1 1268 76.3
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 1842.8 1269 73.9
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 1838.9 1268 73.8
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 1837.4 1268 73.8
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 1837.0 1268 73.5
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1831.2 1269 73.6
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 1829.7 1268 73.4
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 1828.5 1268 73.4
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 1828.1 1268 72.6
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 1827.0 1269 73.4
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 1820.1 1265 72.9
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 1819.7 1271 72.5
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 1815.0 1268 72.7
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 1814.7 1268 72.9
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 1814.3 1268 72.8
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 1814.3 1268 72.8
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 1810.0 1268 72.9
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 1806.6 1268 72.5
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 1805.0 1268 72.3
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 1805.0 1268 72.2
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1802.3 1269 72.8
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 1800.4 1268 72.0
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 1798.9 1268 72.2
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 1798.1 1268 72.1
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 1796.9 1268 72.0
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 1796.6 1268 72.0
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 1795.4 1268 71.8
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 1791.2 1268 71.1
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 1791.2 1268 70.9
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 1790.8 1268 72.1
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 1790.4 1268 72.1
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 1788.9 1268 70.7
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 1787.7 1268 70.7
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 1786.5 1268 71.2
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 1784.6 1269 72.3
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 1784.2 1268 70.3
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1783.5 1269 72.1
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 1783.1 1264 72.0
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 1782.7 1268 71.7
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 1782.3 1268 70.6
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1781.9 1268 71.8
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 1781.1 1268 70.3
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 1780.8 1269 70.6
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 1780.8 1268 71.5
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 1780.4 1269 70.4
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 1780.4 1267 71.1
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1779.2 1269 72.2
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 1777.7 1268 71.1
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 1776.1 1268 70.3
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 1775.8 1271 71.5
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 1774.6 1268 71.1
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 1772.7 1268 70.4
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 1772.7 1270 71.0
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1771.9 1264 72.2
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 1770.0 1268 71.6
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 1768.8 1268 70.7
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1768.4 1240 72.7
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 1768.1 1268 71.3
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 1763.8 1268 71.5
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 1762.3 1268 70.9
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1759.2 1269 70.6
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 1759.2 1275 70.5
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 1758.8 1269 70.7
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1755.0 1270 69.5
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 1753.8 1268 70.6
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 1753.0 1272 70.8
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1752.3 1268 70.5
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1750.7 1269 70.1
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 1750.7 1269 70.4
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 1749.2 1269 70.6
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 1748.8 1267 70.1
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1744.2 1268 71.0
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 1739.9 1263 69.8
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 1739.5 1250 71.0
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 1739.2 1269 70.0
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 1738.4 1268 69.3
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1726.1 1209 72.8
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 1721.8 1249 70.2
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 1718.4 1269 68.6
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 1703.3 1268 68.5
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 1697.6 1268 68.9
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1691.0 1268 68.5
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 1683.7 1274 68.1
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 1674.8 1265 68.1
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 1671.8 1268 68.1
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 1670.2 1268 66.8
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 1669.1 1270 66.3
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 1626.3 1267 66.3
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1611.7 1267 65.2
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1572.4 1268 63.0
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1563.9 1162 69.2
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1535.0 1271 62.9
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1531.2 1272 62.2
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1520.4 1254 63.4
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 1498.4 1275 61.3
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1481.5 1191 64.7
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1459.5 1069 68.4
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1426.8 1181 64.5
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1424.5 1090 68.1
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1401.3 1130 66.2
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1377.1 791 83.7
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1325.8 789 80.9
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1270.4 1321 52.8
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 0.0e+00 1260.0 725 84.3
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1224.2 1047 61.2
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1134.8 1208 53.2
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 9.3e-305 1050.4 1334 45.7
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 7.9e-296 1020.8 1389 44.6
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 8.0e-264 914.4 570 80.0
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 5.6e-241 838.6 762 60.8
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 1.2e-238 830.9 741 61.5
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 6.0e-219 765.4 527 73.1
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 8.2e-200 701.8 455 77.8
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 4.5e-190 669.5 1241 34.6
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 8.9e-146 522.3 315 82.9
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 1.0e-133 482.3 359 68.5
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 3.2e-119 434.1 657 40.8
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 6.0e-118 429.9 312 71.5
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.3e-117 428.7 282 77.7
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 1.6e-110 405.2 270 75.9
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 8.5e-72 276.6 171 78.9
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 4.6e-70 270.8 171 78.4
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.8e-69 268.9 171 77.8
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 9.1e-50 203.4 116 79.3
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 2.9e-40 171.8 155 63.2
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 5.2e-37 161.0 323 38.7
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 6.6e-32 144.1 98 65.3
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 2.4e-26 125.6 71 84.5
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 4.1e-26 124.8 67 85.1
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 9.2e-26 123.6 104 60.6
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 5.4e-18 97.8 77 59.7


User provided reference genes

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