Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004071g0020 Nicotiana tabacum HOM05D001108 ORTHO05D005418 2.2e-133 479.2 283 100.0
Nitab4.5_0000512g0050 Nicotiana tabacum HOM05D001108 ORTHO05D005418 1.5e-126 456.4 283 92.6
Sopen07g028120 Solanum pennellii HOM05D001108 ORTHO05D005418 6.3e-112 407.9 283 77.0
Solyc07g054190.4 Solanum lycopersicum HOM05D001108 ORTHO05D005418 1.1e-111 407.1 283 76.7
CAN.G248.33 Capsicum annuum HOM05D001108 ORTHO05D005418 3.5e-110 402.1 288 75.7
Peaxi162Scf00132g00233 Petunia axillaris HOM05D001229 ORTHO05D005418 2.2e-101 372.9 222 84.7
CAN.G248.11 Capsicum annuum HOM05D001108 ORTHO05D005418 4.2e-100 368.6 210 87.6
SalBow1G0161 Salvia bowleyana HOM05D001108 ORTHO05D005418 1.8e-98 363.2 233 77.7
PGSC0003DMG400018350 Solanum tuberosum HOM05D001108 ORTHO05D005418 1.5e-97 360.1 202 89.6
MSTRG.5628 Avicennia marina HOM05D001108 ORTHO05D005418 2.2e-96 356.3 234 76.5
Migut.C01348 Erythranthe guttata HOM05D001108 ORTHO05D005418 2.8e-96 355.9 235 77.9
CSS0039738 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 9.1e-95 350.9 223 77.6
CSS0002926 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 1.6e-94 350.1 223 77.6
CSS0042510 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 1.6e-94 350.1 223 77.6
unitig_60.g25406 Utricularia gibba HOM05D001108 ORTHO05D005418 4.5e-94 348.6 230 73.9
Hund07929 Selenicereus undatus HOM05D001108 ORTHO05D005418 5.0e-93 345.1 232 74.1
Sc21g0002830 Simmondsia chinensis HOM05D001108 ORTHO05D005418 1.9e-92 343.2 236 73.3
Haze_21052 Corylus avellana HOM05D001108 ORTHO05D001619 5.5e-92 341.7 230 74.3
Nn1g04079 Nelumbo nucifera HOM05D001108 ORTHO05D005418 1.2e-91 340.5 213 78.4
HanXRQChr06g0171321 Helianthus annuus HOM05D001108 ORTHO05D005418 2.1e-91 339.7 212 79.2
QL08p038694 Quercus lobata HOM05D001108 ORTHO05D005418 3.6e-91 339.0 212 77.8
CSS0044059 Camellia sinensis var. sinensis HOM05D001108 ORTHO05D005418 1.0e-90 337.4 215 77.2
Ah.01g015170 Amaranthus hybridus HOM05D001108 ORTHO05D005418 1.4e-90 337.0 225 72.9
HanXRQChr06g0171311 Helianthus annuus HOM05D001108 ORTHO05D005418 1.4e-90 337.0 226 73.5
Prupe.3G137500 Prunus persica HOM05D001108 ORTHO05D005418 1.8e-90 336.7 223 75.3
EL10Ac9g20764 Beta vulgaris HOM05D001108 ORTHO05D005418 3.0e-90 335.9 211 76.3
vmacro12300 Vaccinium macrocarpon HOM05D001108 ORTHO05D005418 3.0e-90 335.9 211 78.7
Cc05_g07130 Coffea canephora HOM05D001108 ORTHO05D005418 4.0e-90 335.5 201 82.6
TAR627G0387 Trochodendron aralioides HOM05D001108 ORTHO05D005418 5.2e-90 335.1 223 74.4
MD09G1247800 Malus domestica HOM05D001108 ORTHO05D005418 6.8e-90 334.7 236 70.8
AUR62019549 Chenopodium quinoa HOM05D001108 ORTHO05D005418 1.2e-89 334.0 234 70.5
Lsat_1_v5_gn_4_70021 Lactuca sativa HOM05D001108 ORTHO05D005418 1.2e-89 334.0 226 72.6
Thecc.05G172000 Theobroma cacao HOM05D001108 ORTHO05D005418 1.2e-89 334.0 232 73.3
Ciclev10013903m.g Citrus clementina HOM05D001108 ORTHO05D005418 1.5e-89 333.6 235 70.6
Lsat_1_v5_gn_3_37280 Lactuca sativa HOM05D001108 ORTHO05D005418 2.0e-89 333.2 221 75.6
AUR62036092 Chenopodium quinoa HOM05D001108 ORTHO05D005418 4.4e-89 332.0 234 69.7
CiPaw.04G125800 Carya illinoinensis HOM05D001108 ORTHO05D005418 7.5e-89 331.3 229 71.6
Atru.chr6.2997 Acer truncatum HOM05D001108 ORTHO05D005418 9.8e-89 330.9 226 73.0
PSO478G1555 Papaver somniferum HOM05D001108 ORTHO05D005418 9.8e-89 330.9 210 77.6
PSO782G4551 Papaver somniferum HOM05D001108 ORTHO05D005418 9.8e-89 330.9 235 71.1
CANSAT80G2367 Cannabis sativa HOM05D001108 ORTHO05D005418 2.2e-88 329.7 236 70.3
COL.COLO4_33977 Corchorus olitorius HOM05D001108 ORTHO05D005418 2.2e-88 329.7 233 71.7
Rhsim06G0142500 Rhododendron simsii HOM05D001108 ORTHO05D005418 3.7e-88 328.9 214 76.2
PSO675G3815 Papaver somniferum HOM05D001108 ORTHO05D005418 6.3e-88 328.2 225 73.3
Gohir.A09G128300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 8.3e-88 327.8 231 70.6
PSO541G4613 Papaver somniferum HOM05D001108 ORTHO05D005418 8.3e-88 327.8 225 72.9
Duzib093G1006 Durio zibethinus HOM05D001108 ORTHO05D005418 1.4e-87 327.0 231 71.4
Gohir.D09G124300 Gossypium hirsutum HOM05D001108 ORTHO05D005418 1.8e-87 326.6 231 70.6
Gorai.006G143100 Gossypium raimondii HOM05D001108 ORTHO05D005418 2.4e-87 326.2 231 70.6
EL10Ac4g08320 Beta vulgaris HOM05D001108 ORTHO05D005418 5.4e-87 325.1 236 67.4
Manes.13G146800 Manihot esculenta HOM05D001108 ORTHO05D005418 9.2e-87 324.3 218 74.3
MD17G1240700 Malus domestica HOM05D001108 ORTHO05D005418 2.0e-86 323.2 220 72.7
TWI75G0959 Tripterygium wilfordii HOM05D001108 ORTHO05D005418 3.5e-86 322.4 213 74.2
Potri.019G100500 Populus trichocarpa HOM05D001108 ORTHO05D005418 7.8e-86 321.2 233 68.2
RcHm_v2.0_Chr7g0232111 Rosa chinensis HOM05D001108 ORTHO05D005418 1.3e-85 320.5 233 69.1
DCAR_013007 Daucus carota HOM05D001108 ORTHO05D005418 2.9e-85 319.3 203 78.3
Lalb_Chr03g0029441 Lupinus albus HOM05D001108 ORTHO05D005418 3.8e-85 318.9 210 74.8
Sabra19G0110800 Salix brachista HOM05D001108 ORTHO05D005418 8.6e-85 317.8 233 68.7
Sabra19G0112200 Salix brachista HOM05D001108 ORTHO05D005418 8.6e-85 317.8 233 68.7
Eucgr.K01017 Eucalyptus grandis HOM05D001108 ORTHO05D005418 1.5e-84 317.0 238 68.9
Haze_13157 Corylus avellana HOM05D001108 ORTHO05D005418 1.9e-84 316.6 202 77.2
Lj3g0011439 Lotus japonicus HOM05D001108 ORTHO05D005418 1.9e-84 316.6 227 68.3
Cfa017142 Carpinus fangiana HOM05D001108 ORTHO05D005418 2.5e-84 316.2 202 77.2
FvH4_5g33380 Fragaria vesca HOM05D001108 ORTHO05D005418 9.5e-84 314.3 216 72.7
FAN18G0425 Fragaria x ananassa HOM05D001108 ORTHO05D005418 9.5e-84 314.3 216 72.7
ClCG02G017630 Citrullus lanatus HOM05D001108 ORTHO05D005418 1.2e-83 313.9 215 71.2
VMungo1127G1775 Vigna mungo HOM05D001108 ORTHO05D005418 1.6e-83 313.5 209 73.2
Glyma.12G112900 Glycine max HOM05D001108 ORTHO05D005418 2.1e-83 313.2 219 70.3
CsaV3_6G012940 Cucumis sativus L. HOM05D001108 ORTHO05D005418 4.7e-83 312.0 222 69.8
Potri.013G131800 Populus trichocarpa HOM05D001108 ORTHO05D005418 4.7e-83 312.0 224 70.5
ECA246G0340 Erigeron canadensis HOM05D001108 ORTHO05D005418 6.1e-83 311.6 201 76.6
FAN04G2154 Fragaria x ananassa HOM05D001108 ORTHO05D005418 6.1e-83 311.6 216 72.2
AUR62002952 Chenopodium quinoa HOM05D001108 ORTHO05D005418 1.0e-82 310.8 234 67.5
PGR142G4253 Punica granatum HOM05D001108 ORTHO05D005418 1.0e-82 310.8 210 74.3
Ca_20056_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 1.8e-82 310.1 209 71.8
Phvul.011G114100 Phaseolus vulgaris HOM05D001108 ORTHO05D005418 3.0e-82 309.3 233 66.5
Cpa.g.sc34.160 Carica papaya HOM05D001108 ORTHO05D005418 5.2e-82 308.5 208 74.5
CsaV3_6G013000 Cucumis sativus L. HOM05D001108 ORTHO05D005418 1.5e-81 307.0 211 70.6
Medtr1g066930 Medicago truncatula HOM05D001108 ORTHO05D005418 2.6e-81 306.2 211 69.7
Sabra13G0111300 Salix brachista HOM05D001108 ORTHO05D005418 5.8e-81 305.1 219 70.3
Sed0006413 Sechium edule HOM05D001108 ORTHO05D005418 7.5e-81 304.7 218 69.3
SGA_v2.0_scaffold92G28314 Striga asiatica HOM05D001108 ORTHO05D005418 1.7e-80 303.5 226 68.6
CARHR111330 Cardamine hirsuta HOM05D001108 ORTHO05D005418 4.9e-80 302.0 210 71.0
THA.LOC104824701 Tarenaya hassleriana HOM05D001108 ORTHO05D005418 4.9e-80 302.0 204 73.5
AT2G20690 Arabidopsis thaliana HOM05D001108 ORTHO05D005418 6.4e-80 301.6 210 71.0
AL3G53780 Arabidopsis lyrata HOM05D001108 ORTHO05D005418 8.3e-80 301.2 223 67.7
Carub.0003s3520 Capsella rubella HOM05D001108 ORTHO05D005418 8.3e-80 301.2 204 74.0
HPP92_003131 Vanilla planifolia HOM05D001108 ORTHO05D005418 1.1e-79 300.8 204 72.1
BcaB03g16863 Brassica carinata HOM05D001108 ORTHO05D005418 1.4e-79 300.4 212 71.2
Aqoxy1G02436 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 4.1e-79 298.9 182 80.2
C07p00210 Brassica napus HOM05D001108 ORTHO05D005418 4.1e-79 298.9 212 70.8
Thhalv10002078m.g Eutrema salsugineum HOM05D001108 ORTHO05D005418 7.0e-79 298.1 210 70.5
Nn1g06569 Nelumbo nucifera HOM05D001108 ORTHO05D005418 7.0e-79 298.1 189 76.7
Medtr0004s0220 Medicago truncatula HOM05D001108 ORTHO05D005418 2.7e-78 296.2 218 66.1
BcaC06g36761 Brassica carinata HOM05D001108 ORTHO05D005418 4.6e-78 295.4 201 73.1
BolC7t40471H Brassica oleracea HOM05D001108 ORTHO05D005418 4.6e-78 295.4 201 73.1
Lj1P722T15 Lonicera japonica HOM05D001108 ORTHO05D005418 6.0e-78 295.0 186 79.0
AUR62007757 Chenopodium quinoa HOM05D001108 ORTHO05D005418 1.0e-77 294.3 226 65.9
A07p00070 Brassica napus HOM05D001108 ORTHO05D005418 3.9e-77 292.4 214 69.6
BraA07t27798Z Brassica rapa HOM05D001108 ORTHO05D005418 2.5e-76 289.7 214 69.2
SEGI_26411 Sequoiadendron giganteum HOM05D001108 ORTHO05D005418 2.5e-76 289.7 220 66.4
Sp3g33940 Schrenkiella parvula HOM05D001108 ORTHO05D005418 5.6e-76 288.5 193 73.1
CDE02G0464 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 2.1e-75 286.6 202 69.3
Aqoxy1G02437 Aquilegia oxysepala HOM05D001108 ORTHO05D005418 2.8e-75 286.2 205 67.8
arahy.Tifrunner.gnm1.ann1.SGC5R3 Arachis hypogaea HOM05D001108 ORTHO05D005418 3.6e-75 285.8 218 69.7
Cpa.g.sc34.159 Carica papaya HOM05D001108 ORTHO05D005418 3.6e-75 285.8 207 65.2
Dinv26419 Davidia involucrata HOM05D001108 ORTHO05D005418 4.7e-75 285.4 177 77.4
arahy.Tifrunner.gnm1.ann1.PPEG78 Arachis hypogaea HOM05D001108 ORTHO05D005418 1.1e-74 284.3 227 67.0
arahy.Tifrunner.gnm1.ann1.85LIYI Arachis hypogaea HOM05D001108 ORTHO05D005418 6.8e-74 281.6 225 65.8
MELO3C000760.2 Cucumis melo HOM05D001108 ORTHO05D005418 1.2e-73 280.8 203 68.0
Mapoly0026s0114 Marchantia polymorpha HOM05D001108 ORTHO05D005418 1.2e-73 280.8 225 61.8
ATR1096G056 Amborella trichopoda HOM05D001108 ORTHO05D005418 2.0e-73 280.0 205 69.3
CAN.G248.16 Capsicum annuum HOM05D001108 ORTHO05D005418 2.6e-73 279.6 165 83.6
CAN.G851.1 Capsicum annuum HOM05D001108 ORTHO05D005418 2.6e-73 279.6 165 83.6
arahy.Tifrunner.gnm1.ann1.S0UG05 Arachis hypogaea HOM05D001108 ORTHO05D005418 4.4e-73 278.9 219 65.8
Pp3c2_19260 Physcomitrium patens HOM05D001108 ORTHO05D005418 2.2e-72 276.6 211 66.8
Dinv23643 Davidia involucrata HOM05D001108 ORTHO05D005418 2.9e-72 276.2 177 75.7
CBR_g36747 Chara braunii HOM05D001108 ORTHO05D005418 3.7e-72 275.8 213 65.7
AagrBONN_evm.TU.Sc2ySwM_228.5414 Anthoceros agrestis HOM05D001108 ORTHO05D005418 9.2e-71 271.2 202 67.3
SMO137G0361 Selaginella moellendorffii HOM05D001108 ORTHO05D005418 1.7e-69 266.9 208 63.0
Duzib128G0360 Durio zibethinus HOM05D001108 ORTHO05D005418 7.3e-68 261.5 192 69.3
Ah.04g164360 Amaranthus hybridus HOM05D001108 ORTHO05D005418 6.2e-67 258.5 225 60.4
CDE09G0563 Ceratophyllum demersum HOM05D001108 ORTHO05D005418 8.9e-66 254.6 179 68.7
Actinidia11036 Actinidia chinensis HOM05D001108 ORTHO05D005418 7.5e-65 251.5 184 69.6
Zm00001eb410410 Zea mays HOM05D001108 ORTHO05D005418 2.7e-62 243.0 225 56.9
Zm00001eb410210 Zea mays HOM05D001108 ORTHO05D005418 3.5e-62 242.7 226 55.8
Os12g0541000 Oryza sativa ssp. japonica HOM05D001108 ORTHO05D005418 1.9e-60 236.9 226 53.1
BcaC04g22783 Brassica carinata HOM05D001108 ORTHO05D005418 1.2e-59 234.2 170 70.6
Sabra19G0110900 Salix brachista HOM05D001108 ORTHO05D005418 4.7e-59 232.3 236 54.7
HanXRQChr06g0169711 Helianthus annuus HOM05D001108 ORTHO05D005418 1.4e-58 230.7 208 61.5
MD09G1265300 Malus domestica HOM05D001108 ORTHO05D005418 1.5e-57 227.3 186 62.9
Psat4g001880 Pisum sativum HOM05D001108 ORTHO05D005418 3.6e-51 206.1 230 48.7
CANSAT80G2295 Cannabis sativa HOM05D001108 ORTHO05D005418 3.1e-50 203.0 130 72.3
C09p15330 Brassica napus HOM05D001108 ORTHO05D005418 8.4e-48 194.9 192 56.2
CAN.G362.18 Capsicum annuum HOM05D001108 ORTHO05D005418 5.4e-47 192.2 229 52.4
unitig_88.g27586 Utricularia gibba HOM05D001108 ORTHO05D005418 2.7e-46 189.9 111 79.3
Lsat_1_v5_gn_4_42240 Lactuca sativa HOM05D001108 ORTHO05D005418 6.2e-43 178.7 113 76.1
Cfa026241 Carpinus fangiana HOM05D001108 ORTHO05D005418 2.6e-41 173.3 178 50.6
Pp3s30_1010 Physcomitrium patens HOM05D000723 ORTHO05D004839 5.8e-41 172.2 198 43.9
HanXRQChr06g0169731 Helianthus annuus HOM05D001108 ORTHO05D005418 2.1e-38 163.7 95 82.1
FAN08G2132 Fragaria x ananassa HOM05D001108 ORTHO05D005418 1.8e-34 150.6 88 79.5
unitig_88.g27587 Utricularia gibba HOM05D001108 ORTHO05D005418 1.9e-31 140.6 99 69.7
Cfa014613 Carpinus fangiana HOM05D001108 ORTHO05D005418 1.1e-28 131.3 198 43.4
CAN.G248.14 Capsicum annuum HOM05D001108 ORTHO05D005418 2.4e-26 123.6 70 84.3
PRCOL_00001102 Prasinoderma coloniale HOM05D001108 ORTHO05D005418 2.6e-25 120.2 156 40.4
MCO11G757 Micromonas commoda HOM05D001108 ORTHO05D005418 2.9e-24 116.7 202 39.1
Cre06.g296600 Chlamydomonas reinhardtii HOM05D001108 ORTHO05D005418 9.3e-23 111.7 211 34.6
Ca_28725_v3 Cicer arietinum L. HOM05D001108 ORTHO05D005418 6.0e-22 109.0 208 34.1
Psat5g098840 Pisum sativum HOM05D001108 ORTHO05D005418 8.2e-19 98.6 98 46.9
AagrBONN_evm.TU.Sc2ySwM_228.459 Anthoceros agrestis HOM05D001108 ORTHO05D005418 5.0e-16 89.4 202 31.2
Psat5g097760 Pisum sativum HOM05D002292 ORTHO05D005418 2.7e-14 83.6 135 34.1
Lsat_1_v5_gn_8_150060 Lactuca sativa HOM05D001108 ORTHO05D005418 1.5e-12 77.8 65 58.5
Medtr4g063470 Medicago truncatula HOM05D001108 ORTHO05D005418 3.7e-11 73.2 66 51.5
RcHm_v2.0_Chr2g0153941 Rosa chinensis HOM05D001108 ORTHO05D005418 3.7e-11 73.2 113 42.5
MBI06_g06479_MAGBIO Magnolia biondii HOM05D001108 ORTHO05D005418 2.0e-09 67.4 71 57.7
BolC9t54441H Brassica oleracea HOM05D001108 ORTHO05D005418 5.9e-09 65.9 38 81.6
Psat0s773g0040 Pisum sativum HOM05D001108 ORTHO05D005418 3.8e-08 63.2 152 33.6
CAN.G10322.1 Capsicum annuum HOM05D001108 ORTHO05D115629 2.1e-06 57.4 45 62.2


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