Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004067g0010 Nicotiana tabacum HOM05D001867 ORTHO05D001708 2.8e-78 295.4 177 100.0
Actinidia33483 Actinidia chinensis HOM05D001867 ORTHO05D001708 9.0e-16 87.8 131 51.1
Actinidia12676 Actinidia chinensis HOM05D001867 ORTHO05D001708 1.2e-15 87.4 131 50.4
Peaxi162Scf00350g00091 Petunia axillaris HOM05D001867 ORTHO05D001708 1.0e-14 84.3 145 47.6
Dinv43665 Davidia involucrata HOM05D001867 ORTHO05D001708 1.7e-14 83.6 145 47.6
PGSC0003DMG400026020 Solanum tuberosum HOM05D001867 ORTHO05D001708 2.9e-14 82.8 107 48.6
CAN.G1872.1 Capsicum annuum HOM05D001867 ORTHO05D001708 6.5e-14 81.6 101 47.5
Solyc01g090840.3 Solanum lycopersicum HOM05D001867 ORTHO05D001708 8.4e-14 81.3 107 48.6
Sopen01g036570 Solanum pennellii HOM05D001867 ORTHO05D001708 8.4e-14 81.3 107 48.6
Dinv44115 Davidia involucrata HOM05D001867 ORTHO05D001708 1.1e-13 80.9 123 49.6
vmacro13448 Vaccinium macrocarpon HOM05D001867 ORTHO05D001708 4.2e-13 79.0 138 43.5
Nitab4.5_0007709g0010 Nicotiana tabacum HOM05D001867 ORTHO05D001708 7.2e-13 78.2 118 45.8
Rhsim01G0135400 Rhododendron simsii HOM05D001867 ORTHO05D001708 7.2e-13 78.2 131 45.8
Lj9A564T24 Lonicera japonica HOM05D001867 ORTHO05D001708 2.1e-12 76.6 85 56.5
Nitab4.5_0000859g0120 Nicotiana tabacum HOM05D001867 ORTHO05D001708 2.1e-12 76.6 119 45.4
Prupe.2G136700 Prunus persica HOM05D001867 ORTHO05D001708 4.6e-12 75.5 121 43.0
Rhsim07G0031800 Rhododendron simsii HOM05D001867 ORTHO05D001708 1.8e-11 73.6 138 42.8
arahy.Tifrunner.gnm1.ann1.F25RYT Arachis hypogaea HOM05D001867 ORTHO05D001708 6.7e-11 71.6 118 43.2
Cc02_g24700 Coffea canephora HOM05D001867 ORTHO05D001708 6.7e-11 71.6 128 43.0
CSS0033702 Camellia sinensis var. sinensis HOM05D001867 ORTHO05D001708 8.7e-11 71.2 136 43.4
Actinidia12181 Actinidia chinensis HOM05D001867 ORTHO05D001708 1.1e-10 70.9 115 46.1
Lj7P537T47 Lonicera japonica HOM05D001867 ORTHO05D001708 1.9e-10 70.1 112 45.5
TWI23G0083 Tripterygium wilfordii HOM05D001867 ORTHO05D001708 1.9e-10 70.1 162 39.5
Nn6g33954 Nelumbo nucifera HOM05D001867 ORTHO05D001708 2.5e-10 69.7 129 40.3
Peaxi162Scf01525g00001 Petunia axillaris HOM05D001867 ORTHO05D001708 2.5e-10 69.7 91 49.5
arahy.Tifrunner.gnm1.ann1.0SN27X Arachis hypogaea HOM05D001867 ORTHO05D001708 3.3e-10 69.3 118 42.4
RcHm_v2.0_Chr1g0348921 Rosa chinensis HOM05D001867 ORTHO05D001708 3.3e-10 69.3 168 35.7
Sabra14G0046100 Salix brachista HOM05D001867 ORTHO05D001708 4.3e-10 68.9 129 41.9
TWI59G0547 Tripterygium wilfordii HOM05D001867 ORTHO05D001708 4.3e-10 68.9 155 39.4
vmacro21036 Vaccinium macrocarpon HOM05D001867 ORTHO05D001708 4.3e-10 68.9 112 46.4
CiPaw.14G025100 Carya illinoinensis HOM05D001867 ORTHO05D001708 5.7e-10 68.6 137 38.0
MSTRG.28174 Avicennia marina HOM05D001867 ORTHO05D001708 9.7e-10 67.8 123 41.5
Dinv21642 Davidia involucrata HOM05D001867 ORTHO05D001708 9.7e-10 67.8 123 42.3
Manes.05G049500 Manihot esculenta HOM05D001867 ORTHO05D001708 9.7e-10 67.8 119 42.0
Aqoxy7G00764 Aquilegia oxysepala HOM05D001867 ORTHO05D001708 1.3e-09 67.4 128 39.8
TWI14G1211 Tripterygium wilfordii HOM05D001867 ORTHO05D001708 1.3e-09 67.4 157 39.5
Glyma.17G142300 Glycine max HOM05D001867 ORTHO05D001708 2.2e-09 66.6 109 39.4
Oeu005826.1 Olea europaea HOM05D001867 ORTHO05D001708 2.2e-09 66.6 149 40.9
Medtr4g100860 Medicago truncatula HOM05D001867 ORTHO05D001708 2.8e-09 66.2 114 41.2
CiPaw.13G031900 Carya illinoinensis HOM05D001867 ORTHO05D001708 3.7e-09 65.9 145 38.6
CSS0026683 Camellia sinensis var. sinensis HOM05D001867 ORTHO05D001708 4.8e-09 65.5 134 39.6
Duzib138G0074 Durio zibethinus HOM05D001867 ORTHO05D001708 4.8e-09 65.5 128 42.2
MSTRG.17158 Avicennia marina HOM05D001867 ORTHO05D001708 6.3e-09 65.1 100 46.0
Actinidia14423 Actinidia chinensis HOM05D001867 ORTHO05D001708 8.2e-09 64.7 119 41.2
Ca_21969_v3 Cicer arietinum L. HOM05D001867 ORTHO05D001708 8.2e-09 64.7 107 40.2
Manes.02G039900 Manihot esculenta HOM05D001867 ORTHO05D001708 8.2e-09 64.7 143 42.0
MSTRG.20726 Avicennia marina HOM05D001867 ORTHO05D001708 1.4e-08 63.9 142 40.1
FvH4_7g10990 Fragaria vesca HOM05D001867 ORTHO05D001708 1.4e-08 63.9 166 35.5
PGR004G0910 Punica granatum HOM05D001867 ORTHO05D001708 1.4e-08 63.9 124 43.5
FAN06G0704 Fragaria x ananassa HOM05D001867 ORTHO05D001708 1.8e-08 63.5 166 35.5
FAN06G3486 Fragaria x ananassa HOM05D001867 ORTHO05D001708 1.8e-08 63.5 166 35.5
Lj1g0010457 Lotus japonicus HOM05D001867 ORTHO05D001708 1.8e-08 63.5 136 39.7
TAR375G0447 Trochodendron aralioides HOM05D001867 ORTHO05D001708 1.8e-08 63.5 117 43.6
Dinv39150 Davidia involucrata HOM05D001867 ORTHO05D001708 2.4e-08 63.2 144 41.7
FAN01G2176 Fragaria x ananassa HOM05D001867 ORTHO05D001708 2.4e-08 63.2 165 35.2
Manes.01G081000 Manihot esculenta HOM05D001867 ORTHO05D001708 2.4e-08 63.2 147 40.1
FAN03G2065 Fragaria x ananassa HOM05D001867 ORTHO05D001708 3.1e-08 62.8 166 34.9
CSS0047209 Camellia sinensis var. sinensis HOM05D001867 ORTHO05D001708 4.1e-08 62.4 134 38.8
FAN10G2581 Fragaria x ananassa HOM05D001867 ORTHO05D001708 4.1e-08 62.4 166 34.9
Phvul.003G221000 Phaseolus vulgaris HOM05D001867 ORTHO05D001708 4.1e-08 62.4 97 46.4
CSS0027051 Camellia sinensis var. sinensis HOM05D001867 ORTHO05D001708 5.3e-08 62.0 106 44.3
Cpa.g.sc2070.1 Carica papaya HOM05D001867 ORTHO05D001708 5.3e-08 62.0 115 44.3
FAN10G0443 Fragaria x ananassa HOM05D001867 ORTHO05D001708 5.3e-08 62.0 169 34.3
Gohir.D12G097800 Gossypium hirsutum HOM05D001867 ORTHO05D001708 5.3e-08 62.0 111 43.2
Gorai.008G106500 Gossypium raimondii HOM05D001867 ORTHO05D001708 5.3e-08 62.0 111 43.2
Lalb_Chr12g0207861 Lupinus albus HOM05D001867 ORTHO05D001708 5.3e-08 62.0 111 36.0
Potri.001G157700 Populus trichocarpa HOM05D001867 ORTHO05D001708 5.3e-08 62.0 144 40.3
Sabra01G0133800 Salix brachista HOM05D001867 ORTHO05D001708 5.3e-08 62.0 134 41.0
Thecc.01G384600 Theobroma cacao HOM05D001867 ORTHO05D001708 5.3e-08 62.0 161 35.4
VMungo0251G1335 Vigna mungo HOM05D001867 ORTHO05D001708 5.3e-08 62.0 97 41.2
AUR62013688 Chenopodium quinoa HOM05D001867 ORTHO05D001708 6.9e-08 61.6 100 43.0
Oeu064580.1 Olea europaea HOM05D001867 ORTHO05D001708 6.9e-08 61.6 88 48.9
COL.COLO4_12481 Corchorus olitorius HOM05D001867 ORTHO05D001708 9.0e-08 61.2 125 37.6
Glyma.01G209100 Glycine max HOM05D001867 ORTHO05D001708 9.0e-08 61.2 120 42.5
Glyma.11G033100 Glycine max HOM05D001867 ORTHO05D001708 9.0e-08 61.2 114 39.5
Actinidia02138 Actinidia chinensis HOM05D001867 ORTHO05D001708 1.2e-07 60.8 145 33.8
Hma1.2p1_1172F.1_g263650 Hydrangea macrophylla HOM05D001867 ORTHO05D001708 1.2e-07 60.8 132 40.9
Manes.14G036900 Manihot esculenta HOM05D001867 ORTHO05D001708 1.2e-07 60.8 126 39.7
Medtr0160s0030 Medicago truncatula HOM05D001867 ORTHO05D001708 1.2e-07 60.8 137 36.5
Sabra03G0047600 Salix brachista HOM05D001867 ORTHO05D001708 1.2e-07 60.8 166 38.0
TPR.G39156 Trifolium pratense HOM05D001867 ORTHO05D001708 1.2e-07 60.8 114 38.6
Ciclev10021224m.g Citrus clementina HOM05D001867 ORTHO05D001708 2.0e-07 60.1 110 42.7
Potri.003G077200 Populus trichocarpa HOM05D001867 ORTHO05D001708 2.6e-07 59.7 165 38.2
Potri.014G066100 Populus trichocarpa HOM05D001867 ORTHO05D001708 2.6e-07 59.7 157 36.3
TAR629G0567 Trochodendron aralioides HOM05D001867 ORTHO05D001708 2.6e-07 59.7 140 36.4
CANSAT21G2160 Cannabis sativa HOM05D001867 ORTHO05D001708 3.4e-07 59.3 115 40.9
PGSC0003DMG400020929 Solanum tuberosum HOM05D001867 ORTHO05D001708 3.4e-07 59.3 59 55.9
QL12p012068 Quercus lobata HOM05D001867 ORTHO05D001708 4.5e-07 58.9 153 37.9
EL10Ac1g00833 Beta vulgaris HOM05D001867 ORTHO05D001708 5.9e-07 58.5 97 43.3
FvH4_5g19030 Fragaria vesca HOM05D001867 ORTHO05D001708 5.9e-07 58.5 131 40.5
FAN04G1302 Fragaria x ananassa HOM05D001867 ORTHO05D001708 5.9e-07 58.5 131 40.5
FAN08G0309 Fragaria x ananassa HOM05D001867 ORTHO05D001708 5.9e-07 58.5 131 40.5
FAN13G2590 Fragaria x ananassa HOM05D001867 ORTHO05D001708 5.9e-07 58.5 131 40.5
FAN18G0011 Fragaria x ananassa HOM05D001867 ORTHO05D001708 5.9e-07 58.5 131 40.5
MD04G1063600 Malus domestica HOM05D001867 ORTHO05D001708 5.9e-07 58.5 138 36.2
Cpa.g.sc29.163 Carica papaya HOM05D001867 ORTHO05D001708 7.7e-07 58.2 162 35.2
CiPaw.11G079500 Carya illinoinensis HOM05D001867 ORTHO05D001708 7.7e-07 58.2 149 38.3
Lj2g0020042 Lotus japonicus HOM05D001867 ORTHO05D001708 7.7e-07 58.2 124 42.7
VMungo1215G3293 Vigna mungo HOM05D001867 ORTHO05D001708 7.7e-07 58.2 132 39.4
MD07G1114000 Malus domestica HOM05D001867 ORTHO05D001708 1.0e-06 57.8 122 38.5
Atru.chr5.231 Acer truncatum HOM05D001867 ORTHO05D001708 1.3e-06 57.4 123 38.2
Atru.chr9.1307 Acer truncatum HOM05D001867 ORTHO05D001708 1.7e-06 57.0 132 37.9
CANSAT21G0755 Cannabis sativa HOM05D001867 ORTHO05D001708 1.7e-06 57.0 123 37.4
ClCG05G000220 Citrullus lanatus HOM05D001867 ORTHO05D001708 1.7e-06 57.0 125 37.6
Phvul.002G058900 Phaseolus vulgaris HOM05D001867 ORTHO05D001708 1.7e-06 57.0 134 38.8
Gohir.D08G188400 Gossypium hirsutum HOM05D001867 ORTHO05D001708 2.2e-06 56.6 116 40.5
Gorai.004G198300 Gossypium raimondii HOM05D001867 ORTHO05D001708 2.2e-06 56.6 116 40.5
Lalb_Chr09g0324371 Lupinus albus HOM05D001867 ORTHO05D001708 2.2e-06 56.6 139 38.1
Manes.01G269300 Manihot esculenta HOM05D001867 ORTHO05D001708 2.2e-06 56.6 139 36.7
Glyma.05G059800 Glycine max HOM05D001867 ORTHO05D001708 2.9e-06 56.2 99 41.4
Lsat_1_v5_gn_7_10021 Lactuca sativa HOM05D001867 ORTHO05D001708 3.8e-06 55.8 84 45.2
SHI13559 Sapria himalayana HOM05D001867 ORTHO05D001708 3.8e-06 55.8 127 37.8
Gohir.A08G170100 Gossypium hirsutum HOM05D001867 ORTHO05D001708 5.0e-06 55.5 115 36.5
PGSC0003DMG400011873 Solanum tuberosum HOM05D001867 ORTHO05D001708 5.0e-06 55.5 150 37.3
MD06G1057700 Malus domestica HOM05D001867 ORTHO05D001708 6.5e-06 55.1 141 36.9
DCAR_015875 Daucus carota HOM05D001867 ORTHO05D001708 8.5e-06 54.7 146 33.6
Duzib205G1684 Durio zibethinus HOM05D001867 ORTHO05D001708 8.5e-06 54.7 136 38.2
Lalb_Chr07g0190321 Lupinus albus HOM05D001867 ORTHO05D001708 8.5e-06 54.7 91 35.2


User provided reference genes

Program Settings