Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 4.3e-167 591.3 304 100.0
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.3e-160 569.7 304 95.4
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 2.4e-157 558.9 304 93.1
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 4.0e-157 558.1 304 93.1
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 1.5e-156 556.2 304 92.8
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 2.6e-156 555.4 304 92.8
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 1.5e-140 503.1 304 82.6
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 3.4e-140 501.9 304 81.9
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 5.9e-140 501.1 304 81.6
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.2e-139 499.2 302 81.5
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 6.5e-139 497.7 304 80.3
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.4e-138 496.5 304 79.3
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 1.9e-138 496.1 304 81.9
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 1.9e-138 496.1 304 81.9
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 2.5e-138 495.7 304 81.9
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 1.6e-137 493.0 304 80.6
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 2.1e-137 492.7 304 80.9
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 2.1e-137 492.7 297 81.8
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 6.7e-136 487.6 304 79.9
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 8.8e-136 487.3 304 79.9
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 1.1e-135 486.9 304 78.6
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.5e-135 486.5 304 79.3
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 3.3e-135 485.3 304 79.9
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 5.7e-135 484.6 304 79.3
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 7.4e-135 484.2 304 79.3
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 2.2e-134 482.6 302 77.2
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 2.2e-134 482.6 303 78.2
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 3.7e-134 481.9 304 79.3
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 6.3e-134 481.1 304 78.0
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 1.1e-133 480.3 304 77.6
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 1.4e-133 479.9 304 78.0
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 3.1e-133 478.8 304 78.9
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 4.1e-133 478.4 304 78.6
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 4.1e-133 478.4 304 78.0
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 5.3e-133 478.0 304 79.3
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 7.0e-133 477.6 304 78.0
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 7.0e-133 477.6 304 76.6
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 3.5e-132 475.3 304 78.6
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 3.5e-132 475.3 304 76.6
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 3.5e-132 475.3 304 77.6
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 5.9e-132 474.6 304 76.6
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 7.7e-132 474.2 304 78.0
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 1.7e-131 473.0 304 76.0
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 3.8e-131 471.9 304 77.3
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 5.0e-131 471.5 304 77.3
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 6.5e-131 471.1 304 77.0
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 6.5e-131 471.1 304 75.7
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 8.5e-131 470.7 304 77.3
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 1.1e-130 470.3 304 75.3
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.5e-130 469.9 304 78.3
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 2.5e-130 469.2 300 77.0
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.5e-130 469.2 305 78.7
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 3.2e-130 468.8 304 75.3
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 3.2e-130 468.8 304 77.0
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 4.2e-130 468.4 304 75.7
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 4.2e-130 468.4 304 75.7
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 2.7e-129 465.7 304 75.3
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 2.7e-129 465.7 304 76.0
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 4.7e-129 464.9 304 75.0
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 8.0e-129 464.2 304 76.0
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 8.0e-129 464.2 304 75.3
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 1.0e-128 463.8 304 75.3
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 1.8e-128 463.0 304 75.7
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 2.3e-128 462.6 304 77.6
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 2.0e-127 459.5 304 74.0
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 2.6e-127 459.1 306 74.2
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 9.7e-127 457.2 304 73.7
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 2.8e-126 455.7 300 74.3
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 3.7e-126 455.3 306 74.8
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 6.3e-126 454.5 306 73.9
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 8.2e-126 454.1 306 73.2
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 8.2e-126 454.1 306 72.2
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 8.2e-126 454.1 306 72.2
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 1.1e-125 453.8 306 72.2
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 1.8e-125 453.0 306 74.2
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 1.8e-125 453.0 306 71.9
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 5.3e-125 451.4 284 79.9
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 9.1e-125 450.7 289 78.9
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 1.2e-124 450.3 306 71.6
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 1.6e-124 449.9 306 71.2
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 2.6e-124 449.1 306 73.2
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 1.7e-123 446.4 303 71.9
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 3.4e-119 432.2 262 82.1
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 1.7e-115 419.9 301 68.4
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 1.7e-115 419.9 301 69.4
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 1.5e-114 416.8 301 68.4
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 1.9e-114 416.4 301 71.4
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 2.3e-112 409.5 286 73.4
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 5.2e-112 408.3 247 82.6
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 5.2e-112 408.3 301 68.1
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 4.4e-111 405.2 304 68.8
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 8.6e-107 391.0 266 73.7
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 8.9e-104 380.9 295 71.5
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 2.4e-101 372.9 242 75.6
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 1.5e-98 363.6 305 61.0
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 1.2e-92 344.0 265 66.0
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 2.7e-92 342.8 230 73.9
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 1.1e-90 337.4 256 67.6
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 2.5e-90 336.3 292 59.2
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 4.1e-85 318.9 220 72.3
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.5e-84 315.8 196 78.6
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 1.0e-83 314.3 302 55.0
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 3.0e-83 312.8 300 54.7
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 3.9e-75 285.8 304 53.3
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 2.5e-74 283.1 196 70.4
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 3.3e-74 282.7 297 52.5
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 1.8e-64 250.4 315 45.4
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 2.6e-63 246.5 215 63.3
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.4e-56 223.4 144 81.9
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.6e-55 219.9 143 81.1
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.2e-54 216.9 144 79.9
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 9.3e-53 211.5 303 45.2
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.0e-47 193.7 144 75.0
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 1.3e-46 191.0 313 39.0
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 1.9e-42 177.2 164 51.8
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 5.8e-39 165.6 138 60.1
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.8e-38 162.9 91 81.3
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 1.6e-36 157.5 363 31.7
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 4.8e-33 146.0 263 39.5
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 1.1e-32 144.8 314 33.4
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 1.0e-27 128.3 330 31.8
MBI05_g43359_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 5.1e-27 125.9 80 77.5
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.2e-14 84.0 54 74.1


User provided reference genes

Program Settings