Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004039g0070 Nicotiana tabacum HOM05D000693 ORTHO05D001102 2.4e-36 154.8 71 100.0
Nitab4.5_0004039g0060 Nicotiana tabacum HOM05D000693 ORTHO05D001102 2.1e-32 141.7 78 85.9
Nitab4.5_0000069g0390 Nicotiana tabacum HOM05D000693 ORTHO05D001102 1.5e-25 119.0 78 75.6
Peaxi162Scf00952g00111 Petunia axillaris HOM05D000693 ORTHO05D001102 1.9e-20 102.1 78 64.1
Peaxi162Scf00338g00426 Petunia axillaris HOM05D000693 ORTHO05D001102 1.9e-17 92.0 66 63.6
PGSC0003DMG400031000 Solanum tuberosum HOM05D000693 ORTHO05D001102 1.9e-17 92.0 78 53.8
Sopen05g001480 Solanum pennellii HOM05D000693 ORTHO05D001102 5.6e-17 90.5 78 53.8
QL03p059876 Quercus lobata HOM05D000693 ORTHO05D001102 7.3e-17 90.1 70 60.0
QL03p059901 Quercus lobata HOM05D000693 ORTHO05D001102 9.5e-17 89.7 70 60.0
arahy.Tifrunner.gnm1.ann1.3B8Q14 Arachis hypogaea HOM05D000693 ORTHO05D001102 2.8e-16 88.2 70 55.7
Peaxi162Scf00338g00046 Petunia axillaris HOM05D000693 ORTHO05D001102 3.6e-16 87.8 69 58.0
QL03p059988 Quercus lobata HOM05D000693 ORTHO05D001102 3.6e-16 87.8 70 58.6
Thecc.02G251900 Theobroma cacao HOM05D000693 ORTHO05D001102 3.6e-16 87.8 67 59.7
Solyc05g005460.3 Solanum lycopersicum HOM05D000693 ORTHO05D001102 4.7e-16 87.4 71 54.9
Cpa.g.sc69.55 Carica papaya HOM05D000693 ORTHO05D001102 6.2e-16 87.0 69 60.9
Ciclev10031097m.g Citrus clementina HOM05D000693 ORTHO05D001102 8.1e-16 86.7 74 58.1
Phvul.003G061100 Phaseolus vulgaris HOM05D000693 ORTHO05D001102 8.1e-16 86.7 74 52.7
SalBow8G0314 Salvia bowleyana HOM05D000693 ORTHO05D001102 8.1e-16 86.7 55 67.3
Lalb_Chr16g0392381 Lupinus albus HOM05D000693 ORTHO05D001102 1.4e-15 85.9 69 59.4
TWI18G0035 Tripterygium wilfordii HOM05D000693 ORTHO05D001102 3.1e-15 84.7 75 58.7
Dinv15284 Davidia involucrata HOM05D000693 ORTHO05D001102 4.0e-15 84.3 70 58.6
Rhsim12G0116800 Rhododendron simsii HOM05D000693 ORTHO05D001102 4.0e-15 84.3 66 60.6
TAR371G0542 Trochodendron aralioides HOM05D000693 ORTHO05D001102 4.0e-15 84.3 66 60.6
DCAR_031110 Daucus carota HOM05D000693 ORTHO05D001102 8.9e-15 83.2 80 57.5
TAR371G1158 Trochodendron aralioides HOM05D000693 ORTHO05D001102 8.9e-15 83.2 69 60.9
EL10Ac6g13686 Beta vulgaris HOM05D000693 ORTHO05D001102 1.2e-14 82.8 61 62.3
QL03p059954 Quercus lobata HOM05D000693 ORTHO05D001102 1.2e-14 82.8 70 57.1
Ca_22873_v3 Cicer arietinum L. HOM05D000693 ORTHO05D001102 1.5e-14 82.4 74 55.4
Ca_22874_v3 Cicer arietinum L. HOM05D000693 ORTHO05D001102 1.5e-14 82.4 74 55.4
Ca_25551_v3 Cicer arietinum L. HOM05D000693 ORTHO05D001102 1.5e-14 82.4 74 55.4
Glyma.08G285900 Glycine max HOM05D000693 ORTHO05D001102 1.5e-14 82.4 77 53.2
CSS0017017 Camellia sinensis var. sinensis HOM05D000693 ORTHO05D001102 2.0e-14 82.0 70 55.7
Hund05999 Selenicereus undatus HOM05D000693 ORTHO05D001102 2.0e-14 82.0 76 55.3
CSS0026451 Camellia sinensis var. sinensis HOM05D000693 ORTHO05D001102 2.6e-14 81.6 76 56.6
CSS0038467 Camellia sinensis var. sinensis HOM05D000693 ORTHO05D001102 2.6e-14 81.6 76 56.6
COL.COLO4_24187 Corchorus olitorius HOM05D000693 ORTHO05D001102 2.6e-14 81.6 72 56.9
Lalb_Chr05g0228211 Lupinus albus HOM05D000693 ORTHO05D001102 2.6e-14 81.6 68 52.9
Rhsim12G0116600 Rhododendron simsii HOM05D000693 ORTHO05D001102 2.6e-14 81.6 71 57.7
Rhsim12G0116700 Rhododendron simsii HOM05D000693 ORTHO05D001102 2.6e-14 81.6 71 57.7
QL03p060032 Quercus lobata HOM05D000693 ORTHO05D001102 3.4e-14 81.3 70 55.7
TWI75G0209 Tripterygium wilfordii HOM05D000693 ORTHO05D001102 4.4e-14 80.9 75 54.7
vmacro16243 Vaccinium macrocarpon HOM05D000693 ORTHO05D001102 4.4e-14 80.9 66 56.1
CiPaw.05G152100 Carya illinoinensis HOM05D000693 ORTHO05D001102 5.8e-14 80.5 69 58.0
Hma1.2p1_0160F.1_g070940 Hydrangea macrophylla HOM05D000693 ORTHO05D001102 7.5e-14 80.1 71 60.6
FvH4_4g34260 Fragaria vesca HOM05D000693 ORTHO05D001102 9.9e-14 79.7 69 56.5
FAN12G3377 Fragaria x ananassa HOM05D000693 ORTHO05D001102 9.9e-14 79.7 69 56.5
FAN22G0877 Fragaria x ananassa HOM05D000693 ORTHO05D001102 1.3e-13 79.3 69 55.1
VMungo0251G0207 Vigna mungo HOM05D000693 ORTHO05D001102 1.3e-13 79.3 79 48.1
Hma1.2p1_0160F.1_g070950 Hydrangea macrophylla HOM05D000693 ORTHO05D001102 1.7e-13 79.0 60 61.7
MBI11_g13785_MAGBIO Magnolia biondii HOM05D000693 ORTHO05D001102 2.9e-13 78.2 60 61.7
MBI11_g32267_MAGBIO Magnolia biondii HOM05D000693 ORTHO05D001102 2.9e-13 78.2 60 61.7
MD16G1094400 Malus domestica HOM05D000693 ORTHO05D001102 2.9e-13 78.2 75 56.0
Prupe.1G171000 Prunus persica HOM05D000693 ORTHO05D001102 2.9e-13 78.2 77 53.2
RcHm_v2.0_Chr6g0250421 Rosa chinensis HOM05D000693 ORTHO05D001102 2.9e-13 78.2 70 55.7
vmacro16244 Vaccinium macrocarpon HOM05D000693 ORTHO05D001102 2.9e-13 78.2 71 53.5
ECA246G4497 Erigeron canadensis HOM05D000693 ORTHO05D001102 3.7e-13 77.8 76 52.6
MBI19_g05289_MAGBIO Magnolia biondii HOM05D000693 ORTHO05D001102 3.7e-13 77.8 60 61.7
Duzib251G0642 Durio zibethinus HOM05D000693 ORTHO05D001102 4.9e-13 77.4 75 54.7
Manes.12G027800 Manihot esculenta HOM05D000693 ORTHO05D001102 4.9e-13 77.4 71 52.1
Sc04g0009190 Simmondsia chinensis HOM05D000693 ORTHO05D001102 4.9e-13 77.4 79 48.1
TAR371G0111 Trochodendron aralioides HOM05D000693 ORTHO05D001102 4.9e-13 77.4 77 55.8
Dinv24840 Davidia involucrata HOM05D000693 ORTHO05D001102 1.1e-12 76.3 80 51.2
Duzib268G1238 Durio zibethinus HOM05D000693 ORTHO05D001102 1.1e-12 76.3 75 54.7
Os03g0405900 Oryza sativa ssp. japonica HOM05D000693 ORTHO05D001102 1.4e-12 75.9 69 52.2
Sabra10G0046000 Salix brachista HOM05D000693 ORTHO05D001102 1.9e-12 75.5 68 54.4
Sc04g0009210 Simmondsia chinensis HOM05D000693 ORTHO05D001102 1.9e-12 75.5 68 50.0
Ah.02g129980 Amaranthus hybridus HOM05D000693 ORTHO05D001102 2.4e-12 75.1 72 54.2
Medtr8g064810 Medicago truncatula HOM05D000693 ORTHO05D001102 2.4e-12 75.1 70 54.3
Sabra10G0046300 Salix brachista HOM05D000693 ORTHO05D001102 2.4e-12 75.1 59 59.3
Actinidia15049 Actinidia chinensis HOM05D000693 ORTHO05D001102 3.2e-12 74.7 78 50.0
AUR62014052 Chenopodium quinoa HOM05D000693 ORTHO05D001102 3.2e-12 74.7 61 57.4
MD16G1094500 Malus domestica HOM05D000693 ORTHO05D001102 3.2e-12 74.7 75 52.0
Psat0s3746g0080 Pisum sativum HOM05D000693 ORTHO05D001102 3.2e-12 74.7 70 52.9
Sabra10G0045800 Salix brachista HOM05D000693 ORTHO05D001102 3.2e-12 74.7 59 59.3
TPR.G40664 Trifolium pratense HOM05D000693 ORTHO05D001102 3.2e-12 74.7 69 49.3
Cfa009161 Carpinus fangiana HOM05D000693 ORTHO05D001102 4.1e-12 74.3 69 52.2
MD13G1093200 Malus domestica HOM05D000693 ORTHO05D001102 4.1e-12 74.3 75 52.0
TPR.G6178 Trifolium pratense HOM05D000693 ORTHO05D001102 5.4e-12 73.9 70 52.9
MSTRG.13371 Avicennia marina HOM05D000693 ORTHO05D001102 7.1e-12 73.6 71 49.3
Nn4g22752 Nelumbo nucifera HOM05D000693 ORTHO05D001102 7.1e-12 73.6 74 47.3
TPR.G24630 Trifolium pratense HOM05D000693 ORTHO05D001102 7.1e-12 73.6 70 51.4
Dinv33979 Davidia involucrata HOM05D000693 ORTHO05D001102 9.2e-12 73.2 62 54.8
MBI19_g05288_MAGBIO Magnolia biondii HOM05D000693 ORTHO05D001102 9.2e-12 73.2 60 56.7
Potri.010G059401 Populus trichocarpa HOM05D000693 ORTHO05D001102 9.2e-12 73.2 59 57.6
Potri.010G060200 Populus trichocarpa HOM05D000693 ORTHO05D001102 9.2e-12 73.2 68 52.9
PGR119G0380 Punica granatum HOM05D000693 ORTHO05D001102 9.2e-12 73.2 76 46.1
Cfa009158 Carpinus fangiana HOM05D000693 ORTHO05D001102 1.2e-11 72.8 72 51.4
Potri.010G059550 Populus trichocarpa HOM05D000693 ORTHO05D001102 1.2e-11 72.8 59 57.6
Potri.010G059700 Populus trichocarpa HOM05D000693 ORTHO05D001102 1.2e-11 72.8 59 57.6
Potri.010G059900 Populus trichocarpa HOM05D000693 ORTHO05D001102 1.2e-11 72.8 59 57.6
Sabra10G0045900 Salix brachista HOM05D000693 ORTHO05D001102 1.2e-11 72.8 56 60.7
Sabra10G0046100 Salix brachista HOM05D000693 ORTHO05D001102 1.2e-11 72.8 59 57.6
AUR62005390 Chenopodium quinoa HOM05D000693 ORTHO05D001102 1.6e-11 72.4 61 55.7
Zm00001eb019530 Zea mays HOM05D000693 ORTHO05D001102 1.6e-11 72.4 60 58.3
Potri.010G059600 Populus trichocarpa HOM05D000693 ORTHO05D001102 2.1e-11 72.0 76 50.0
Aqoxy3G02926 Aquilegia oxysepala HOM05D000693 ORTHO05D001102 2.7e-11 71.6 77 53.2
Os03g0405500 Oryza sativa ssp. japonica HOM05D000693 ORTHO05D001102 2.7e-11 71.6 71 54.9
THA.LOC104823646 Tarenaya hassleriana HOM05D000693 ORTHO05D001102 2.7e-11 71.6 78 53.8
Prupe.1G252100 Prunus persica HOM05D000693 ORTHO05D001102 3.5e-11 71.2 75 50.7
Prupe.1G252200 Prunus persica HOM05D000693 ORTHO05D001102 3.5e-11 71.2 76 50.0
AUR62005391 Chenopodium quinoa HOM05D000693 ORTHO05D001102 4.6e-11 70.9 74 48.6
AUR62014053 Chenopodium quinoa HOM05D000693 ORTHO05D001102 4.6e-11 70.9 76 48.7
Lj4g0007399 Lotus japonicus HOM05D000693 ORTHO05D001102 6.0e-11 70.5 75 46.7
EL10Ac6g13687 Beta vulgaris HOM05D000693 ORTHO05D001102 7.8e-11 70.1 75 48.0
Sabra10G0046200 Salix brachista HOM05D000693 ORTHO05D001102 7.8e-11 70.1 59 55.9
Eucgr.H02590 Eucalyptus grandis HOM05D000693 ORTHO05D001102 1.0e-10 69.7 77 51.9
MD16G1094200 Malus domestica HOM05D000693 ORTHO05D001102 1.0e-10 69.7 77 50.6
arahy.Tifrunner.gnm1.ann1.A4VS3L Arachis hypogaea HOM05D000693 ORTHO05D001102 1.3e-10 69.3 54 53.7
arahy.Tifrunner.gnm1.ann1.MZYS79 Arachis hypogaea HOM05D000693 ORTHO05D001102 1.3e-10 69.3 54 53.7
BcaC09g49412 Brassica carinata HOM05D000693 ORTHO05D001102 1.7e-10 68.9 70 51.4
C01p37000 Brassica napus HOM05D000693 ORTHO05D001102 1.7e-10 68.9 70 51.4
BolC1t03656H Brassica oleracea HOM05D000693 ORTHO05D001102 1.7e-10 68.9 70 51.4
FAN07G0393 Fragaria x ananassa HOM05D000693 ORTHO05D001102 1.7e-10 68.9 71 49.3
FAN17G1899 Fragaria x ananassa HOM05D000693 ORTHO05D001102 1.7e-10 68.9 71 49.3
Cfa009157 Carpinus fangiana HOM05D000693 ORTHO05D001102 3.9e-10 67.8 60 55.0
Potri.010G060100 Populus trichocarpa HOM05D000693 ORTHO05D001102 3.9e-10 67.8 58 55.2
A01p29230 Brassica napus HOM05D000693 ORTHO05D001102 5.1e-10 67.4 70 50.0
BraA01t02973Z Brassica rapa HOM05D000693 ORTHO05D001102 5.1e-10 67.4 70 50.0
ClCG08G001470 Citrullus lanatus HOM05D000693 ORTHO05D001102 5.1e-10 67.4 66 50.0
Oeu003456.1 Olea europaea HOM05D000693 ORTHO05D001102 5.1e-10 67.4 78 50.0
PGR142G3211 Punica granatum HOM05D000005 ORTHO05D000012 5.1e-10 67.4 68 48.5
SEGI_21187 Sequoiadendron giganteum HOM05D000693 ORTHO05D001102 5.1e-10 67.4 57 54.4
BcaB04g20265 Brassica carinata HOM05D000693 ORTHO05D001102 6.6e-10 67.0 70 50.0
Thhalv10023374m.g Eutrema salsugineum HOM05D000693 ORTHO05D001102 6.6e-10 67.0 70 50.0
FvH4_4g34250 Fragaria vesca HOM05D000693 ORTHO05D001102 6.6e-10 67.0 71 47.9
FAN12G1892 Fragaria x ananassa HOM05D000693 ORTHO05D001102 6.6e-10 67.0 71 47.9
Sed0026221 Sechium edule HOM05D000693 ORTHO05D001102 6.6e-10 67.0 59 55.9
MELO3C022138.2 Cucumis melo HOM05D000693 ORTHO05D001102 8.6e-10 66.6 71 49.3
CsaV3_5G039610 Cucumis sativus L. HOM05D000693 ORTHO05D001102 8.6e-10 66.6 71 47.9
Cpa.g.sc69.56 Carica papaya HOM05D000693 ORTHO05D001102 1.1e-09 66.2 69 49.3
Eucgr.H02593 Eucalyptus grandis HOM05D000693 ORTHO05D001102 1.1e-09 66.2 75 48.0
Lsat_1_v5_gn_0_27901 Lactuca sativa HOM05D000693 ORTHO05D001102 1.1e-09 66.2 77 45.5
Lsat_1_v5_gn_0_37240 Lactuca sativa HOM05D000693 ORTHO05D001102 1.1e-09 66.2 68 50.0
arahy.Tifrunner.gnm1.ann1.WMTX8C Arachis hypogaea HOM05D000693 ORTHO05D001102 1.5e-09 65.9 63 49.2
CSS0020878 Camellia sinensis var. sinensis HOM05D000693 ORTHO05D001102 1.9e-09 65.5 68 48.5
CSS0047412 Camellia sinensis var. sinensis HOM05D000693 ORTHO05D001102 1.9e-09 65.5 68 48.5
Gohir.A03G138800 Gossypium hirsutum HOM05D000693 ORTHO05D001102 1.9e-09 65.5 72 50.0
HanXRQChr17g0539661 Helianthus annuus HOM05D000693 ORTHO05D001102 1.9e-09 65.5 60 50.0
Sed0021488 Sechium edule HOM05D000693 ORTHO05D001102 1.9e-09 65.5 75 50.7
Hund06000 Selenicereus undatus HOM05D000693 ORTHO05D001102 2.5e-09 65.1 61 49.2
vmacro16241 Vaccinium macrocarpon HOM05D000693 ORTHO05D001102 2.5e-09 65.1 59 52.5
CANSAT01G2656 Cannabis sativa HOM05D000693 ORTHO05D001102 3.3e-09 64.7 74 50.0
CsaV3_5G039620 Cucumis sativus L. HOM05D000693 ORTHO05D001102 3.3e-09 64.7 71 47.9
Eucgr.H02592 Eucalyptus grandis HOM05D000693 ORTHO05D001102 3.3e-09 64.7 74 48.6
Potri.010G060300 Populus trichocarpa HOM05D000693 ORTHO05D001102 3.3e-09 64.7 59 52.5
CAN.G507.1 Capsicum annuum HOM05D000693 ORTHO05D001102 5.6e-09 63.9 68 45.6
ClCG08G001480 Citrullus lanatus HOM05D000693 ORTHO05D001102 5.6e-09 63.9 71 49.3
Gorai.005G181700 Gossypium raimondii HOM05D000693 ORTHO05D001102 5.6e-09 63.9 72 50.0
PGR142G2220 Punica granatum HOM05D000005 ORTHO05D000012 5.6e-09 63.9 71 45.1
CiPaw.05G152300 Carya illinoinensis HOM05D000693 ORTHO05D001102 7.3e-09 63.5 78 42.3
Carub.0005s0852 Capsella rubella HOM05D000693 ORTHO05D001102 9.5e-09 63.2 59 50.8
AT1G60420 Arabidopsis thaliana HOM05D000693 ORTHO05D001102 1.2e-08 62.8 65 49.2
CSS0004274 Camellia sinensis var. sinensis HOM05D000693 ORTHO05D001102 1.2e-08 62.8 59 50.8
Sed0009984 Sechium edule HOM05D000693 ORTHO05D001102 1.2e-08 62.8 71 49.3
Actinidia15050 Actinidia chinensis HOM05D000693 ORTHO05D001102 1.6e-08 62.4 69 47.8
AL2G16280 Arabidopsis lyrata HOM05D000693 ORTHO05D001102 1.6e-08 62.4 70 45.7
Gohir.D02G161700 Gossypium hirsutum HOM05D000693 ORTHO05D001102 2.1e-08 62.0 72 48.6
ATR0006G073 Amborella trichopoda HOM05D000693 ORTHO05D001102 3.6e-08 61.2 79 41.8
Carub.0002s0492 Capsella rubella HOM05D000693 ORTHO05D001102 3.6e-08 61.2 70 47.1
Manes.12G027700 Manihot esculenta HOM05D000693 ORTHO05D001102 3.6e-08 61.2 68 47.1
DCAR_007084 Daucus carota HOM05D000693 ORTHO05D001102 4.7e-08 60.8 58 51.7
SEGI_12775 Sequoiadendron giganteum HOM05D000693 ORTHO05D001102 4.7e-08 60.8 77 40.3
MELO3C022139.2 Cucumis melo HOM05D000693 ORTHO05D001102 8.1e-08 60.1 71 45.1
CANSAT01G0510 Cannabis sativa HOM05D000693 ORTHO05D001102 1.1e-07 59.7 75 49.3
CARHR052630 Cardamine hirsuta HOM05D000693 ORTHO05D001102 1.1e-07 59.7 62 51.6
ATR0006G006 Amborella trichopoda HOM05D000693 ORTHO05D001102 3.1e-07 58.2 58 44.8
unitig_27.g25194 Utricularia gibba HOM05D000693 ORTHO05D001102 4.0e-07 57.8 76 42.1
Hund25355 Selenicereus undatus HOM05D000693 ORTHO05D001102 5.2e-07 57.4 68 36.8
vmacro16242 Vaccinium macrocarpon HOM05D000693 ORTHO05D001102 1.5e-06 55.8 36 61.1
Ciclev10010235m.g Citrus clementina HOM05D000693 ORTHO05D001102 4.4e-06 54.3 60 48.3
PGR031G2272 Punica granatum HOM05D000693 ORTHO05D001102 5.8e-06 53.9 76 38.2
MELO3C013994.2 Cucumis melo HOM05D000693 ORTHO05D001102 7.6e-06 53.5 72 40.3


User provided reference genes

Program Settings