Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004038g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.3e-85 317.4 160 100.0
Nitab4.5_0007565g0070 Nicotiana tabacum HOM05D000017 ORTHO05D002765 4.5e-22 108.6 71 80.3
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-21 106.7 137 42.3
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-21 106.7 126 44.4
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-19 100.1 116 44.0
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.6e-17 91.7 126 38.1
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 7.4e-17 91.3 130 36.9
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 1.6e-16 90.1 130 36.9
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.4e-15 86.3 125 36.8
Nitab4.5_0000797g0070 Nicotiana tabacum HOM05D009153 ORTHO05D011903 5.3e-15 85.1 48 81.2
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.5e-14 83.6 131 35.1
Nitab4.5_0000721g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.6e-14 82.8 93 44.1
Solyc09g150133.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 7.6e-14 81.3 104 35.6
Solyc10g047821.1 Solanum lycopersicum HOM05D007248 ORTHO05D002765 7.6e-14 81.3 104 36.5
Sopen05g022560 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-13 80.9 104 36.5
Nitab4.5_0007005g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.2e-13 79.7 125 35.2
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.2e-13 79.7 111 37.8
Sopen09g015530 Solanum pennellii HOM05D006864 ORTHO05D002765 2.2e-13 79.7 131 38.2
Nitab4.5_0000423g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.9e-13 79.3 123 36.6
Nitab4.5_0003767g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.9e-13 79.3 134 34.3
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.5e-12 76.3 111 36.9
Nitab4.5_0004917g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.5e-12 76.3 133 33.1
Nitab4.5_0006628g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.5e-12 76.3 128 35.2
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.5e-12 75.1 95 38.9
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.1e-12 74.7 111 37.8
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.1e-12 74.7 111 37.8
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.2e-11 73.9 111 37.8
Nitab4.5_0020188g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.2e-11 73.9 129 34.1
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.5e-11 72.4 116 36.2
Nitab4.5_0000516g0080 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.1e-11 71.6 95 37.9
Nitab4.5_0000231g0410 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.9e-11 71.2 92 41.3
Nitab4.5_0000814g0120 Nicotiana tabacum HOM05D007248 ORTHO05D002765 7.9e-11 71.2 125 33.6
Nitab4.5_0001614g0160 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.9e-11 71.2 137 32.8
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-10 70.9 150 34.0
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-10 70.9 116 37.9
Nitab4.5_0002806g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-10 70.9 132 36.4
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-10 70.5 92 39.1
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-10 70.5 104 36.5
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-10 70.5 115 36.5
Nitab4.5_0008791g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.3e-10 70.5 121 32.2
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.3e-10 70.5 111 36.9
Nitab4.5_0000091g0330 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.8e-10 70.1 99 44.4
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.0e-10 69.3 117 35.0
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.9e-10 68.9 104 37.5
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.9e-10 68.9 89 41.6
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.1e-10 68.6 132 34.8
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.1e-10 68.6 104 37.5
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.7e-10 68.2 112 36.6
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.7e-10 68.2 111 36.0
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-09 67.0 104 36.5
Nitab4.5_0010096g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-09 67.0 93 38.7
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.9e-09 66.6 84 40.5
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.9e-09 66.6 93 38.7
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.5e-09 66.2 144 33.3
Nitab4.5_0000228g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.3e-09 65.9 130 32.3
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.3e-09 65.5 89 39.3
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.7e-09 65.1 89 38.2
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.4e-09 64.7 165 30.9
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.4e-09 64.7 135 32.6
Nitab4.5_0003288g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 7.4e-09 64.7 72 43.1
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.7e-09 64.3 103 35.9
Nitab4.5_0011890g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 9.7e-09 64.3 78 39.7
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-08 63.9 121 31.4
Nitab4.5_0005249g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-08 63.9 109 34.9
Nitab4.5_0000425g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.6e-08 63.5 103 32.0
Nitab4.5_0006179g0060 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.6e-08 63.5 118 33.9
Sopen01g015850 Solanum pennellii HOM05D000004 ORTHO05D000002 2.2e-08 63.2 96 40.6
Sopen11g019130 Solanum pennellii HOM05D000047 ORTHO05D000589 2.2e-08 63.2 110 33.6
Nitab4.5_0002373g0160 Nicotiana tabacum HOM05D007248 ORTHO05D002765 2.8e-08 62.8 117 32.5
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 6.3e-08 61.6 135 25.9
Nitab4.5_0002944g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.2e-08 61.2 92 38.0
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.8e-07 60.1 99 34.3
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.4e-07 59.7 92 38.0
Nitab4.5_0001030g0050 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.1e-07 58.9 85 37.6
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.1e-07 58.9 124 32.3
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.3e-07 58.5 130 31.5
Nitab4.5_0024513g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.3e-07 58.5 125 32.0
Sopen09g012340 Solanum pennellii HOM05D006864 ORTHO05D000013 5.3e-07 58.5 98 38.8
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-06 57.4 112 33.9
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 1.5e-06 57.0 132 27.3
Nitab4.5_0000662g0100 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.0e-06 56.6 132 31.1
Nitab4.5_0012202g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-06 56.6 96 40.6
Nitab4.5_0006001g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.6e-06 56.2 135 29.6
Nitab4.5_0002993g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.4e-06 55.8 97 38.1
Nitab4.5_0017446g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.5e-06 55.5 68 44.1
Nitab4.5_0010143g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.9e-06 55.1 121 35.5
Nitab4.5_0000008g0780 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-05 54.3 69 47.8
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-05 54.3 102 30.4
Nitab4.5_0004449g0040 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.0e-05 54.3 99 36.4


User provided reference genes

Program Settings