Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004038g0030 Nicotiana tabacum HOM05D026636 ORTHO05D022967 2.0e-112 409.1 203 100.0
Nitab4.5_0020402g0020 Nicotiana tabacum HOM05D026636 ORTHO05D022967 5.1e-47 191.8 124 79.0
Peaxi162Scf00111g01113 Petunia axillaris HOM05D026636 ORTHO05D022967 4.2e-33 145.6 151 57.6
PGSC0003DMG400007103 Solanum tuberosum HOM05D026636 ORTHO05D022967 1.7e-18 97.1 179 40.2
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 3.2e-17 92.8 207 37.2
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 3.6e-16 89.4 191 37.7
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 6.7e-15 85.1 161 37.9
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 3.3e-14 82.8 173 36.4
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 4.3e-14 82.4 179 36.9
Peaxi162Scf00111g01114 Petunia axillaris HOM05D050400 ORTHO05D050251 1.1e-12 77.8 62 71.0
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 4.1e-12 75.9 175 35.4
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 4.1e-12 75.9 169 34.9
Oeu020030.1 Olea europaea HOM05D008142 ORTHO05D009674 1.5e-11 73.9 140 38.6
CSS0032813 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 3.4e-11 72.8 164 38.4
TAR627G0365 Trochodendron aralioides HOM05D008142 ORTHO05D009674 3.4e-11 72.8 176 33.0
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 1.3e-10 70.9 179 35.8
CSS0017983 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 6.5e-10 68.6 179 36.3
Oeu001311.1 Olea europaea HOM05D008142 ORTHO05D009674 6.5e-10 68.6 171 35.1
Oeu020029.1 Olea europaea HOM05D008142 ORTHO05D009674 1.1e-09 67.8 184 33.2
Thecc.07G144400 Theobroma cacao HOM05D008142 ORTHO05D009674 1.9e-09 67.0 139 36.0
ECA236G2480 Erigeron canadensis HOM05D002418 ORTHO05D002572 2.5e-09 66.6 156 34.0
COL.COLO4_17430 Corchorus olitorius HOM05D008142 ORTHO05D009674 1.6e-08 63.9 121 36.4
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 1.6e-08 63.9 163 33.7
Thecc.07G144200 Theobroma cacao HOM05D008142 ORTHO05D009674 1.6e-08 63.9 134 36.6
Nitab4.5_0007142g0040 Nicotiana tabacum HOM05D011950 ORTHO05D009674 2.1e-08 63.5 169 34.3
Nitab4.5_0000923g0030 Nicotiana tabacum HOM05D065472 ORTHO05D022967 2.7e-08 63.2 150 32.7
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 2.7e-08 63.2 142 33.1
Lsat_1_v5_gn_7_100541 Lactuca sativa HOM05D008142 ORTHO05D009674 3.6e-08 62.8 156 30.8
PGSC0003DMG400007050 Solanum tuberosum HOM05D011950 ORTHO05D009674 3.6e-08 62.8 180 33.9
DCAR_021049 Daucus carota HOM05D008142 ORTHO05D009674 4.7e-08 62.4 181 30.9
Haze_08481 Corylus avellana HOM05D008142 ORTHO05D009674 6.1e-08 62.0 153 37.9
Cfa019469 Carpinus fangiana HOM05D008142 ORTHO05D009674 7.9e-08 61.6 144 37.5
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 7.9e-08 61.6 149 31.5
MSTRG.15018 Avicennia marina HOM05D008142 ORTHO05D009674 1.0e-07 61.2 174 30.5
Migut.M00615 Erythranthe guttata HOM05D019704 ORTHO05D009674 1.0e-07 61.2 156 28.8
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 1.0e-07 61.2 161 31.7
Aqoxy1G01717 Aquilegia oxysepala HOM05D008142 ORTHO05D009674 1.8e-07 60.5 180 33.9
Cc05_g10420 Coffea canephora HOM05D011950 ORTHO05D009674 1.8e-07 60.5 174 33.3
Sopen07g030160 Solanum pennellii HOM05D011950 ORTHO05D009674 3.9e-07 59.3 185 32.4
PGSC0003DMG400007051 Solanum tuberosum HOM05D005872 ORTHO05D008133 5.1e-07 58.9 44 72.7
Nitab4.5_0000639g0100 Nicotiana tabacum HOM05D011950 ORTHO05D009674 6.7e-07 58.5 168 33.3
MSTRG.6725 Avicennia marina HOM05D008142 ORTHO05D009674 1.1e-06 57.8 155 30.3
Nitab4.5_0004038g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 1.1e-06 57.8 193 33.7
COL.COLO4_17432 Corchorus olitorius HOM05D008142 ORTHO05D009674 1.5e-06 57.4 127 35.4
DCAR_013786 Daucus carota HOM05D019704 ORTHO05D009674 1.5e-06 57.4 160 28.1
Nitab4.5_0025344g0010 Nicotiana tabacum HOM05D065472 ORTHO05D022967 1.5e-06 57.4 120 35.0
Gohir.A01G043100 Gossypium hirsutum HOM05D008142 ORTHO05D009674 2.0e-06 57.0 152 34.2
Nitab4.5_0020402g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 2.0e-06 57.0 188 33.5
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 2.6e-06 56.6 159 32.7
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 4.4e-06 55.8 172 34.9
Sopen07g030170 Solanum pennellii HOM05D050400 ORTHO05D050251 5.7e-06 55.5 44 68.2
Solyc07g061890.1 Solanum lycopersicum HOM05D011950 ORTHO05D009674 9.7e-06 54.7 185 30.8
TAR626G0317 Trochodendron aralioides HOM05D008142 ORTHO05D009674 9.7e-06 54.7 139 29.5


User provided reference genes

Program Settings