Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004038g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 1.9e-104 382.5 187 100.0
Nitab4.5_0020402g0010 Nicotiana tabacum HOM05D011950 ORTHO05D009674 1.5e-98 362.8 187 94.7
PGSC0003DMG400007050 Solanum tuberosum HOM05D011950 ORTHO05D009674 1.6e-71 273.1 185 75.1
Solyc07g061890.1 Solanum lycopersicum HOM05D011950 ORTHO05D009674 1.3e-68 263.5 188 71.8
Sopen07g030160 Solanum pennellii HOM05D011950 ORTHO05D009674 9.1e-67 257.3 189 71.4
Peaxi162Scf00111g01112 Petunia axillaris HOM05D011950 ORTHO05D009674 1.7e-44 183.3 161 65.8
Peaxi162Scf00000g00523 Petunia axillaris HOM05D011950 ORTHO05D009674 8.9e-38 161.0 187 54.5
Nitab4.5_0000639g0100 Nicotiana tabacum HOM05D011950 ORTHO05D009674 8.6e-33 144.4 187 51.3
Nitab4.5_0007142g0040 Nicotiana tabacum HOM05D011950 ORTHO05D009674 1.2e-31 140.6 189 50.3
PGSC0003DMG400008560 Solanum tuberosum HOM05D011950 ORTHO05D009674 1.8e-30 136.7 185 50.8
Sopen12g006760 Solanum pennellii HOM05D011950 ORTHO05D009674 2.4e-27 126.3 185 49.2
Hma1.2p1_0280F.1_g112890 Hydrangea macrophylla HOM05D008142 ORTHO05D009674 4.0e-22 109.0 185 41.1
PGSC0003DMG401021252 Solanum tuberosum HOM05D011950 ORTHO05D009674 3.7e-20 102.4 186 40.9
Dinv26679 Davidia involucrata HOM05D008142 ORTHO05D009674 4.6e-18 95.5 150 42.7
CSS0003990 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 8.6e-17 91.3 193 39.4
CSS0017983 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 1.9e-16 90.1 193 39.4
Dinv13326 Davidia involucrata HOM05D000230 ORTHO05D000176 2.5e-16 89.7 186 39.8
Actinidia35170 Actinidia chinensis HOM05D008142 ORTHO05D009674 4.3e-16 89.0 190 36.3
CSS0032813 Camellia sinensis var. sinensis HOM05D008142 ORTHO05D009674 2.8e-15 86.3 195 36.4
Actinidia18850 Actinidia chinensis HOM05D008142 ORTHO05D009674 8.1e-15 84.7 174 37.9
RhsimUnG0205200 Rhododendron simsii HOM05D008142 ORTHO05D009674 5.2e-14 82.0 189 37.6
RhsimUnG0205300 Rhododendron simsii HOM05D008142 ORTHO05D009674 8.9e-14 81.3 187 36.4
Nitab4.5_0002209g0210 Nicotiana tabacum HOM05D011950 ORTHO05D009674 1.3e-12 77.4 139 41.0
QL04p069987 Quercus lobata HOM05D008142 ORTHO05D009674 1.3e-12 77.4 192 38.0
Oeu001311.1 Olea europaea HOM05D008142 ORTHO05D009674 2.9e-12 76.3 200 37.0
Oeu020029.1 Olea europaea HOM05D008142 ORTHO05D009674 6.4e-12 75.1 192 34.4
Prupe.4G151500 Prunus persica HOM05D015893 ORTHO05D019166 3.2e-11 72.8 195 31.8
Nn3g20734 Nelumbo nucifera HOM05D008142 ORTHO05D009674 4.1e-11 72.4 192 39.1
TAR627G0365 Trochodendron aralioides HOM05D008142 ORTHO05D009674 1.6e-10 70.5 185 32.4
MSTRG.15018 Avicennia marina HOM05D008142 ORTHO05D009674 2.3e-09 66.6 199 34.2
MD03G1255600 Malus domestica HOM05D015893 ORTHO05D019166 2.3e-09 66.6 198 33.3
Lsat_1_v5_gn_7_100541 Lactuca sativa HOM05D008142 ORTHO05D009674 8.6e-09 64.7 187 32.1
Nitab4.5_0020402g0020 Nicotiana tabacum HOM05D026636 ORTHO05D022967 8.6e-09 64.7 142 37.3
MD11G1276300 Malus domestica HOM05D015893 ORTHO05D019166 1.9e-08 63.5 196 31.6
Nn4g26546 Nelumbo nucifera HOM05D008142 ORTHO05D009674 3.3e-08 62.8 187 32.1
Eucgr.F03213 Eucalyptus grandis HOM05D008142 ORTHO05D009674 4.3e-08 62.4 191 35.6
Cc05_g10420 Coffea canephora HOM05D011950 ORTHO05D009674 5.6e-08 62.0 187 33.2
ECA236G2480 Erigeron canadensis HOM05D002418 ORTHO05D002572 7.3e-08 61.6 189 31.7
RcHm_v2.0_Chr5g0028181 Rosa chinensis HOM05D008142 ORTHO05D009674 7.3e-08 61.6 176 33.5
FvH4_3g16940 Fragaria vesca HOM05D008142 ORTHO05D009674 1.6e-07 60.5 176 34.7
FAN11G1471 Fragaria x ananassa HOM05D008142 ORTHO05D009674 1.6e-07 60.5 176 34.7
FAN16G2943 Fragaria x ananassa HOM05D008142 ORTHO05D009674 6.2e-07 58.5 176 34.1
QL04p069966 Quercus lobata HOM05D008142 ORTHO05D009674 6.2e-07 58.5 188 34.6
Gohir.D01G033700 Gossypium hirsutum HOM05D008142 ORTHO05D009674 1.1e-06 57.8 186 29.0
Potri.001G379400 Populus trichocarpa HOM05D008142 ORTHO05D009674 1.8e-06 57.0 187 33.7
DCAR_021049 Daucus carota HOM05D008142 ORTHO05D009674 2.4e-06 56.6 203 32.5
Migut.M00615 Erythranthe guttata HOM05D019704 ORTHO05D009674 3.1e-06 56.2 173 33.5
TAR629G2490 Trochodendron aralioides HOM05D008142 ORTHO05D009674 3.1e-06 56.2 176 33.0
Prupe.4G151600 Prunus persica HOM05D008142 ORTHO05D009674 5.2e-06 55.5 180 33.3
FAN21G3515 Fragaria x ananassa HOM05D008142 ORTHO05D009674 8.9e-06 54.7 173 33.5


User provided reference genes

Program Settings