Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004015g0040 Nicotiana tabacum HOM05D005423 ORTHO05D006223 2.3e-117 425.6 222 100.0
Nitab4.5_0006659g0010 Nicotiana tabacum HOM05D005423 ORTHO05D006223 4.2e-111 404.8 224 93.3
PGSC0003DMG400025363 Solanum tuberosum HOM05D005423 ORTHO05D006223 9.4e-71 270.8 218 66.5
Sopen11g030350 Solanum pennellii HOM05D005423 ORTHO05D006223 2.6e-68 262.7 218 65.1
Solyc11g072680.1 Solanum lycopersicum HOM05D005423 ORTHO05D006223 5.7e-68 261.5 218 64.2
CAN.G84.20 Capsicum annuum HOM05D005423 ORTHO05D006223 3.2e-63 245.7 226 62.4
SGA_v2.0_scaffold1G00298 Striga asiatica HOM05D005423 ORTHO05D006223 6.6e-48 194.9 150 63.3
Migut.M01932 Erythranthe guttata HOM05D005423 ORTHO05D006223 2.3e-45 186.4 168 53.6
Lj1P1155T48 Lonicera japonica HOM05D005423 ORTHO05D006223 2.3e-45 186.4 160 56.2
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 4.9e-43 178.7 158 55.1
Hma1.2p1_0410F.1_g147050 Hydrangea macrophylla HOM05D005423 ORTHO05D006223 3.2e-42 176.0 163 55.8
Lsat_1_v5_gn_1_91741 Lactuca sativa HOM05D005423 ORTHO05D006223 1.2e-41 174.1 176 50.6
Rhsim13G0126500 Rhododendron simsii HOM05D005423 ORTHO05D006223 2.7e-41 172.9 167 59.9
Duzib160G0446 Durio zibethinus HOM05D005423 ORTHO05D006223 1.0e-40 171.0 145 56.6
Thecc.06G005400 Theobroma cacao HOM05D005423 ORTHO05D006223 3.0e-40 169.5 151 55.0
Cfa000754 Carpinus fangiana HOM05D005423 ORTHO05D006223 6.6e-40 168.3 161 54.0
HanXRQChr01g0020631 Helianthus annuus HOM05D005423 ORTHO05D006223 6.6e-40 168.3 145 56.6
FvH4_3g11440 Fragaria vesca HOM05D005423 ORTHO05D006223 1.9e-39 166.8 162 52.5
MD00G1097400 Malus domestica HOM05D005423 ORTHO05D006223 1.9e-39 166.8 212 45.8
Manes.03G066900 Manihot esculenta HOM05D005423 ORTHO05D006223 9.5e-39 164.5 151 55.0
FAN16G1003 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.6e-38 163.7 147 54.4
EL10Ac5g10610 Beta vulgaris HOM05D005423 ORTHO05D006223 4.7e-38 162.2 170 45.9
Potri.001G440800 Populus trichocarpa HOM05D005423 ORTHO05D006223 8.1e-38 161.4 161 49.1
CiPaw.09G149100 Carya illinoinensis HOM05D005423 ORTHO05D006223 1.1e-37 161.0 160 53.8
Aqoxy2G01436 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 3.1e-37 159.5 146 53.4
Gohir.D02G104700 Gossypium hirsutum HOM05D005423 ORTHO05D006223 3.1e-37 159.5 153 50.3
Gorai.005G118900 Gossypium raimondii HOM05D005423 ORTHO05D006223 3.1e-37 159.5 153 50.3
CANSAT35G1706 Cannabis sativa HOM05D005423 ORTHO05D006223 5.2e-37 158.7 163 49.7
Prupe.4G102300 Prunus persica HOM05D005423 ORTHO05D006223 6.8e-37 158.3 212 43.9
Atru.chr10.659 Acer truncatum HOM05D005423 ORTHO05D006223 1.2e-36 157.5 148 54.1
Gohir.A02G088801 Gossypium hirsutum HOM05D005423 ORTHO05D006223 3.4e-36 156.0 153 49.0
TWI38G0231 Tripterygium wilfordii HOM05D005423 ORTHO05D006223 9.8e-36 154.5 162 46.3
AUR62028667 Chenopodium quinoa HOM05D005423 ORTHO05D006223 2.2e-35 153.3 154 46.8
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 2.2e-35 153.3 135 57.8
QL05p063092 Quercus lobata HOM05D005423 ORTHO05D006223 4.9e-35 152.1 138 52.9
Ah.02g124440 Amaranthus hybridus HOM05D005423 ORTHO05D006223 6.4e-35 151.8 157 47.8
AUR62028668 Chenopodium quinoa HOM05D005423 ORTHO05D006223 4.1e-34 149.1 149 47.7
Ciclev10017493m.g Citrus clementina HOM05D005423 ORTHO05D006223 4.1e-34 149.1 155 49.7
AUR62008092 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.2e-33 147.5 156 46.2
AUR62008091 Chenopodium quinoa HOM05D005423 ORTHO05D006223 3.5e-33 146.0 149 48.3
MBI19_g30013_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 3.5e-33 146.0 140 54.3
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 7.3e-31 138.3 140 47.1
AUR62008089 Chenopodium quinoa HOM05D005423 ORTHO05D006223 1.2e-30 137.5 154 46.8
COL.COLO4_26869 Corchorus olitorius HOM05D005423 ORTHO05D006223 3.6e-30 136.0 140 50.7
Psat1g018720 Pisum sativum HOM05D005423 ORTHO05D006223 1.1e-29 134.4 154 49.4
Carub.0006s3088 Capsella rubella HOM05D005423 ORTHO05D006223 8.9e-29 131.3 202 39.6
AL1G44970 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 2.0e-28 130.2 143 47.6
EL10Ac5g10640 Beta vulgaris HOM05D005423 ORTHO05D006223 2.6e-28 129.8 169 37.3
Haze_05969 Corylus avellana HOM05D005423 ORTHO05D006223 2.6e-28 129.8 132 50.8
Sc21g0002200 Simmondsia chinensis HOM05D005423 ORTHO05D006223 2.6e-28 129.8 138 50.7
Oeu063151.1 Olea europaea HOM05D005423 ORTHO05D006223 3.4e-28 129.4 93 65.6
EL10Ac5g10674 Beta vulgaris HOM05D005423 ORTHO05D006223 5.8e-28 128.6 168 38.1
Ca_02385_v3 Cicer arietinum L. HOM05D005423 ORTHO05D006223 5.8e-28 128.6 140 49.3
Sabra16G0300100 Salix brachista HOM05D005423 ORTHO05D006223 7.6e-28 128.3 114 52.6
A08p11040 Brassica napus HOM05D005423 ORTHO05D006223 1.3e-27 127.5 142 48.6
BcaC07g37806 Brassica carinata HOM05D005423 ORTHO05D006223 1.7e-27 127.1 142 47.9
BolC8t48195H Brassica oleracea HOM05D005423 ORTHO05D006223 1.7e-27 127.1 142 47.9
Carub.0001s2910 Capsella rubella HOM05D005423 ORTHO05D006223 1.7e-27 127.1 142 48.6
Glyma.15G191500 Glycine max HOM05D005423 ORTHO05D006223 1.7e-27 127.1 146 46.6
Sabra16G0298100 Salix brachista HOM05D005423 ORTHO05D006223 1.7e-27 127.1 114 51.8
Lj6g0018842 Lotus japonicus HOM05D005423 ORTHO05D006223 2.2e-27 126.7 161 45.3
Sc21g0002210 Simmondsia chinensis HOM05D005423 ORTHO05D006223 2.2e-27 126.7 138 49.3
Aa31LG6G12020 Aethionema arabicum HOM05D005423 ORTHO05D006223 3.8e-27 125.9 147 49.7
BcaB04g18206 Brassica carinata HOM05D005423 ORTHO05D006223 3.8e-27 125.9 142 47.9
BraA08t33095Z Brassica rapa HOM05D005423 ORTHO05D006223 3.8e-27 125.9 142 47.9
AT1G30800 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 1.1e-26 124.4 213 37.6
Oeu000496.1 Olea europaea HOM05D005423 ORTHO05D006223 1.9e-26 123.6 92 63.0
Sp1g26680 Schrenkiella parvula HOM05D005423 ORTHO05D006223 2.4e-26 123.2 144 47.9
C08p24310 Brassica napus HOM05D005423 ORTHO05D006223 4.1e-26 122.5 138 46.4
BcaB01g00727 Brassica carinata HOM05D005423 ORTHO05D006223 7.1e-26 121.7 137 46.7
CARHR030270 Cardamine hirsuta HOM05D005423 ORTHO05D006223 7.1e-26 121.7 140 47.1
Thhalv10009325m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 7.1e-26 121.7 145 46.2
BolC8t50049H Brassica oleracea HOM05D005423 ORTHO05D006223 9.2e-26 121.3 138 46.4
Lalb_Chr11g0073251 Lupinus albus HOM05D005423 ORTHO05D006223 9.2e-26 121.3 149 45.0
TPR.G22906 Trifolium pratense HOM05D005423 ORTHO05D006223 1.6e-25 120.6 155 45.2
MBI19_g33491_MAGBIO Magnolia biondii HOM05D005423 ORTHO05D006223 2.7e-25 119.8 129 51.9
BcaC07g39399 Brassica carinata HOM05D005423 ORTHO05D006223 3.5e-25 119.4 138 45.7
A06p18470 Brassica napus HOM05D005423 ORTHO05D006223 4.6e-25 119.0 138 45.7
CDE04G0856 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 4.6e-25 119.0 156 42.3
FAN25G0767 Fragaria x ananassa HOM05D005423 ORTHO05D006223 4.6e-25 119.0 102 55.9
THA.LOC104814335 Tarenaya hassleriana HOM05D005423 ORTHO05D006223 1.0e-24 117.9 139 46.0
FAN21G0600 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.7e-24 117.1 90 60.0
Medtr2g047120 Medicago truncatula HOM05D005423 ORTHO05D006223 3.9e-24 115.9 150 44.7
CDE04G2898 Ceratophyllum demersum HOM05D005423 ORTHO05D006223 6.6e-24 115.2 141 41.1
PSO210G3101 Papaver somniferum HOM05D005423 ORTHO05D006223 5.2e-21 105.5 148 39.2
Duzib043G0004 Durio zibethinus HOM05D005423 ORTHO05D006223 6.9e-21 105.1 143 43.4
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 2.6e-20 103.2 175 36.0
AUR62007135 Chenopodium quinoa HOM05D005423 ORTHO05D006223 3.4e-20 102.8 115 45.2
Potri.011G155150 Populus trichocarpa HOM05D005423 ORTHO05D006223 1.3e-19 100.9 96 46.9
FAN23G0143 Fragaria x ananassa HOM05D005423 ORTHO05D006223 1.7e-19 100.5 93 51.6
FvH4_5g18240 Fragaria vesca HOM05D005423 ORTHO05D006223 1.1e-18 97.8 97 50.5
FvH4_1g24910 Fragaria vesca HOM05D005423 ORTHO05D006223 1.4e-18 97.4 96 51.0
CARHR237890 Cardamine hirsuta HOM05D005423 ORTHO05D006223 1.9e-18 97.1 142 36.6
Phvul.009G218400 Phaseolus vulgaris HOM05D005423 ORTHO05D006223 2.4e-18 96.7 101 49.5
FAN18G3875 Fragaria x ananassa HOM05D005423 ORTHO05D006223 7.1e-18 95.1 97 49.5
FvH4_5g21920 Fragaria vesca HOM05D005423 ORTHO05D006223 9.3e-18 94.7 106 47.2
Sp7g27780 Schrenkiella parvula HOM05D005423 ORTHO05D006223 9.3e-18 94.7 139 36.0
Thhalv10026388m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 1.6e-17 94.0 146 35.6
A03p59360 Brassica napus HOM05D005423 ORTHO05D006223 2.1e-17 93.6 147 33.3
BraA03t14993Z Brassica rapa HOM05D005423 ORTHO05D006223 2.1e-17 93.6 147 33.3
C07p57390 Brassica napus HOM05D005423 ORTHO05D006223 3.5e-17 92.8 147 33.3
BolC7t46208H Brassica oleracea HOM05D005423 ORTHO05D006223 3.5e-17 92.8 147 33.3
Mapoly0033s0033 Marchantia polymorpha HOM05D005423 ORTHO05D006223 3.9e-16 89.4 159 34.6
BcaNung00507 Brassica carinata HOM05D005423 ORTHO05D006223 2.5e-15 86.7 147 32.0
AL7G22260 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 3.3e-15 86.3 142 34.5
AT4G29980 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 5.6e-15 85.5 142 33.8
Thhalv10027436m.g Eutrema salsugineum HOM05D005423 ORTHO05D006223 9.6e-15 84.7 149 33.6
Carub.0007s1066 Capsella rubella HOM05D005423 ORTHO05D006223 1.3e-14 84.3 141 32.6
AT4G12950 Arabidopsis thaliana HOM05D005423 ORTHO05D006223 1.6e-14 84.0 141 35.5
Aqoxy7G03258 Aquilegia oxysepala HOM05D005423 ORTHO05D006223 2.4e-13 80.1 76 52.6
DCAR_001448 Daucus carota HOM05D005423 ORTHO05D006223 4.5e-12 75.9 145 35.9
BcaC07g40588 Brassica carinata HOM05D005423 ORTHO05D006223 2.2e-11 73.6 63 54.0
FvH4_6g29350 Fragaria vesca HOM05D005423 ORTHO05D006223 2.9e-11 73.2 69 53.6
Sp7g28070 Schrenkiella parvula HOM05D005423 ORTHO05D006223 2.9e-11 73.2 141 32.6
A03p59580 Brassica napus HOM05D005423 ORTHO05D006223 4.9e-11 72.4 141 34.0
BraA03t15014Z Brassica rapa HOM05D005423 ORTHO05D006223 1.4e-10 70.9 141 33.3
FAN11G1050 Fragaria x ananassa HOM05D005423 ORTHO05D006223 2.4e-10 70.1 73 50.7
FAN03G0475 Fragaria x ananassa HOM05D005423 ORTHO05D006223 3.2e-10 69.7 67 53.7
FAN14G5542 Fragaria x ananassa HOM05D005423 ORTHO05D006223 3.2e-10 69.7 67 53.7
FAN18G0575 Fragaria x ananassa HOM05D005423 ORTHO05D006223 3.2e-10 69.7 72 50.0
BcaC09g50401 Brassica carinata HOM05D005423 ORTHO05D006223 1.2e-09 67.8 59 54.2
TAR624G0561 Trochodendron aralioides HOM05D005305 ORTHO05D006394 2.1e-09 67.0 142 31.7
Nn5g28774 Nelumbo nucifera HOM05D005305 ORTHO05D006394 4.6e-09 65.9 193 29.0
Pp3c1_4130 Physcomitrium patens HOM05D022662 ORTHO05D006223 4.6e-09 65.9 181 27.6
AL7G23570 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 6.0e-09 65.5 138 33.3
Lj6g0026147 Lotus japonicus HOM05D003663 ORTHO05D005327 7.9e-09 65.1 120 32.5
CARHR238100 Cardamine hirsuta HOM05D005423 ORTHO05D006223 1.0e-08 64.7 75 42.7
A09p38220 Brassica napus HOM05D005423 ORTHO05D006223 3.9e-08 62.8 51 58.8
Ca_00744_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 5.1e-08 62.4 132 32.6
Pp3c13_8280 Physcomitrium patens HOM05D022662 ORTHO05D006223 6.7e-08 62.0 155 29.7
SMO290G0002 Selaginella moellendorffii HOM05D005423 ORTHO05D006223 6.7e-08 62.0 163 30.7
Ah.03g133360 Amaranthus hybridus HOM05D005305 ORTHO05D006394 8.7e-08 61.6 126 31.0
Ciclev10001162m.g Citrus clementina HOM05D005305 ORTHO05D006394 8.7e-08 61.6 142 33.1
Nitab4.5_0009996g0030 Nicotiana tabacum HOM05D007205 ORTHO05D009175 1.1e-07 61.2 73 35.6
EL10Ac6g13873 Beta vulgaris HOM05D005305 ORTHO05D006394 1.5e-07 60.8 107 30.8
Potri.006G016700 Populus trichocarpa HOM05D003663 ORTHO05D005327 1.5e-07 60.8 98 31.6
AL7G23530 Arabidopsis lyrata HOM05D005423 ORTHO05D006223 2.5e-07 60.1 77 35.1
arahy.Tifrunner.gnm1.ann1.5NF29Y Arachis hypogaea HOM05D003663 ORTHO05D005327 2.5e-07 60.1 120 30.8
arahy.Tifrunner.gnm1.ann1.CR9YGF Arachis hypogaea HOM05D003663 ORTHO05D005327 2.5e-07 60.1 120 30.8
Pp3c6_3400 Physcomitrium patens HOM05D005423 ORTHO05D006223 2.5e-07 60.1 156 26.9
TPR.G10569 Trifolium pratense HOM05D003663 ORTHO05D005327 2.5e-07 60.1 120 30.8
DCAR_002955 Daucus carota HOM05D005423 ORTHO05D006223 3.3e-07 59.7 77 41.6
Hma1.2p1_2614F.1_g325410 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 4.3e-07 59.3 121 28.1
TWI31G0537 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 4.3e-07 59.3 116 34.5
AUR62024239 Chenopodium quinoa HOM05D005305 ORTHO05D006394 5.6e-07 58.9 134 28.4
Mapoly0095s0061 Marchantia polymorpha HOM05D005423 ORTHO05D006223 5.6e-07 58.9 170 30.6
Psat1g178200 Pisum sativum HOM05D003663 ORTHO05D005327 5.6e-07 58.9 132 31.1
Oeu035198.1 Olea europaea HOM05D005305 ORTHO05D006394 9.6e-07 58.2 184 28.8
CSS0002540 Camellia sinensis var. sinensis HOM05D007205 ORTHO05D009175 1.3e-06 57.8 69 30.4
DCAR_010543 Daucus carota HOM05D003663 ORTHO05D005327 1.3e-06 57.8 138 26.8
Hma1.2p1_1267F.1_g271530 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 1.3e-06 57.8 133 27.1
Lalb_Chr20g0119391 Lupinus albus HOM05D003663 ORTHO05D005327 1.3e-06 57.8 99 32.3
Nn1g03229 Nelumbo nucifera HOM05D003663 ORTHO05D005327 1.3e-06 57.8 99 31.3
Sc12g0002500 Simmondsia chinensis HOM05D007205 ORTHO05D009175 1.3e-06 57.8 78 32.1
TAR381G1643 Trochodendron aralioides HOM05D005305 ORTHO05D006394 1.3e-06 57.8 113 34.5
Ah.13g072750 Amaranthus hybridus HOM05D003663 ORTHO05D005327 1.6e-06 57.4 169 27.8
CSS0043111 Camellia sinensis var. sinensis HOM05D005305 ORTHO05D006394 1.6e-06 57.4 187 28.9
Cfa016035 Carpinus fangiana HOM05D003663 ORTHO05D005327 1.6e-06 57.4 174 30.5
Nn1g06067 Nelumbo nucifera HOM05D005305 ORTHO05D006394 1.6e-06 57.4 181 28.2
Sp1g13500 Schrenkiella parvula HOM05D005305 ORTHO05D006394 2.1e-06 57.0 105 32.4
A06p11170 Brassica napus HOM05D005305 ORTHO05D006394 2.8e-06 56.6 155 29.7
DCAR_019203 Daucus carota HOM05D007205 ORTHO05D009175 2.8e-06 56.6 72 34.7
AUR62005501 Chenopodium quinoa HOM05D005305 ORTHO05D006394 3.6e-06 56.2 103 30.1
BolC5t30066H Brassica oleracea HOM05D005305 ORTHO05D006394 4.8e-06 55.8 129 30.2
CARHR015700 Cardamine hirsuta HOM05D005305 ORTHO05D006394 4.8e-06 55.8 106 34.0
Glyma.17G149700 Glycine max HOM05D003663 ORTHO05D005327 4.8e-06 55.8 142 28.9
Lalb_Chr21g0308511 Lupinus albus HOM05D002727 ORTHO05D002856 4.8e-06 55.8 122 32.8
MBI18_g38398_MAGBIO Magnolia biondii HOM05D007205 ORTHO05D009175 4.8e-06 55.8 103 31.1
SalBow5G2993 Salvia bowleyana HOM05D005305 ORTHO05D006394 4.8e-06 55.8 148 28.4
Sed0009741 Sechium edule HOM05D007205 ORTHO05D009175 4.8e-06 55.8 98 36.7
Ca_00097_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 6.2e-06 55.5 143 30.1
Ca_29935_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 6.2e-06 55.5 143 30.1
Peaxi162Scf00007g00153 Petunia axillaris HOM05D007205 ORTHO05D009175 6.2e-06 55.5 101 29.7
Pp3c26_11940 Physcomitrium patens HOM05D022662 ORTHO05D006223 6.2e-06 55.5 145 26.9
PGR119G0434 Punica granatum HOM05D002727 ORTHO05D002856 6.2e-06 55.5 111 28.8
TWI75G1301 Tripterygium wilfordii HOM05D007205 ORTHO05D009175 6.2e-06 55.5 72 33.3
ClCG01G006130 Citrullus lanatus HOM05D002727 ORTHO05D002856 8.1e-06 55.1 136 28.7
FAN11G2744 Fragaria x ananassa HOM05D005423 ORTHO05D046010 8.1e-06 55.1 58 50.0
Hma1.2p1_0712F.1_g207580 Hydrangea macrophylla HOM05D007205 ORTHO05D009175 8.1e-06 55.1 78 32.1
Lj4g0026545 Lotus japonicus HOM05D003663 ORTHO05D005327 8.1e-06 55.1 137 32.1


User provided reference genes

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