Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004011g0050 Nicotiana tabacum HOM05D000003 ORTHO05D011611 1.2e-100 369.8 184 100.0
Nitab4.5_0000151g0420 Nicotiana tabacum HOM05D000003 ORTHO05D011611 7.2e-32 141.4 167 47.3
Nitab4.5_0005442g0030 Nicotiana tabacum HOM05D000003 ORTHO05D011611 7.4e-21 104.8 82 53.7
Nitab4.5_0000151g0430 Nicotiana tabacum HOM05D000003 ORTHO05D011611 5.3e-19 98.6 74 64.9
Nitab4.5_0001519g0110 Nicotiana tabacum HOM05D000003 ORTHO05D000007 5.3e-19 98.6 81 56.8
Nitab4.5_0005640g0020 Nicotiana tabacum HOM05D000003 ORTHO05D011611 1.7e-17 93.6 99 49.5
EL10Ac1g02104 Beta vulgaris HOM05D000003 ORTHO05D011611 3.2e-16 89.4 68 57.4
Nitab4.5_0003024g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000007 6.1e-15 85.1 52 67.3
Nitab4.5_0002525g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.0e-14 84.3 63 57.1
EL10Ac7g17199 Beta vulgaris HOM05D000003 ORTHO05D000007 3.9e-14 82.4 177 30.5
CANSAT01G0243 Cannabis sativa HOM05D000003 ORTHO05D000007 8.8e-14 81.3 87 46.0
CANSAT25G1254 Cannabis sativa HOM05D000003 ORTHO05D000007 8.8e-14 81.3 87 46.0
EL10Ac5g11620 Beta vulgaris HOM05D000003 ORTHO05D000007 5.7e-13 78.6 220 25.0
EL10Ac8g19433 Beta vulgaris HOM05D000003 ORTHO05D000007 5.7e-13 78.6 220 25.0
EL10Ac9g22997 Beta vulgaris HOM05D000003 ORTHO05D000007 2.2e-12 76.6 221 24.9
EL10Ac3g06400 Beta vulgaris HOM05D000003 ORTHO05D000007 4.8e-12 75.5 63 42.9
CANSAT11G0526 Cannabis sativa HOM05D000003 ORTHO05D000007 4.8e-12 75.5 87 42.5
CANSAT21G1545 Cannabis sativa HOM05D000003 ORTHO05D000007 6.3e-12 75.1 103 35.9
EL10As3g23356 Beta vulgaris HOM05D000003 ORTHO05D000007 1.1e-11 74.3 68 42.6
CANSAT80G0090 Cannabis sativa HOM05D000003 ORTHO05D000007 1.4e-11 73.9 62 48.4
EL10Ac1g01965 Beta vulgaris HOM05D000003 ORTHO05D000007 1.8e-11 73.6 88 35.2
EL10Ac3g06546 Beta vulgaris HOM05D000003 ORTHO05D000007 1.8e-11 73.6 199 28.1
Hund08810 Selenicereus undatus HOM05D000003 ORTHO05D000007 3.1e-11 72.8 69 46.4
EL10Ac6g13748 Beta vulgaris HOM05D000003 ORTHO05D000007 5.3e-11 72.0 126 27.8
Sopen03g020920 Solanum pennellii HOM05D015165 ORTHO05D017089 9.1e-11 71.2 96 32.3
EL10Ac1g01948 Beta vulgaris HOM05D000003 ORTHO05D000006 1.2e-10 70.9 91 30.8
CANSAT54G2202 Cannabis sativa HOM05D000003 ORTHO05D000007 1.2e-10 70.9 88 39.8
EL10Ac1g02040 Beta vulgaris HOM05D000003 ORTHO05D000007 1.6e-10 70.5 73 43.8
CANSAT01G1392 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-10 70.5 65 41.5
Ah.13g067160 Amaranthus hybridus HOM05D017406 ORTHO05D000007 2.0e-10 70.1 102 30.4
EL10Ac8g19445 Beta vulgaris HOM05D000003 ORTHO05D000007 3.5e-10 69.3 91 36.3
EL10Ac4g09212 Beta vulgaris HOM05D000003 ORTHO05D000007 4.5e-10 68.9 73 41.1
EL10Ac6g14081 Beta vulgaris HOM05D000003 ORTHO05D000007 4.5e-10 68.9 91 29.7
EL10Ac8g19497 Beta vulgaris HOM05D000003 ORTHO05D000007 4.5e-10 68.9 75 37.3
CANSAT01G1178 Cannabis sativa HOM05D000003 ORTHO05D000007 4.5e-10 68.9 66 43.9
CANSAT78G1995 Cannabis sativa HOM05D000003 ORTHO05D000007 4.5e-10 68.9 83 36.1
Ah.10g029790 Amaranthus hybridus HOM05D000003 ORTHO05D000007 5.9e-10 68.6 145 29.0
Ah.14g080910 Amaranthus hybridus HOM05D000003 ORTHO05D000007 5.9e-10 68.6 91 36.3
EL10Ac6g13827 Beta vulgaris HOM05D000003 ORTHO05D000007 7.7e-10 68.2 61 44.3
CANSAT01G2288 Cannabis sativa HOM05D000003 ORTHO05D000006 7.7e-10 68.2 70 45.7
CANSAT64G2710 Cannabis sativa HOM05D000003 ORTHO05D000007 7.7e-10 68.2 74 40.5
EL10Ac7g17172 Beta vulgaris HOM05D000003 ORTHO05D000007 1.3e-09 67.4 77 37.7
CANSAT01G0517 Cannabis sativa HOM05D000003 ORTHO05D000007 1.3e-09 67.4 56 48.2
CANSAT11G0663 Cannabis sativa HOM05D000004 ORTHO05D000034 2.2e-09 66.6 68 38.2
CANSAT54G2645 Cannabis sativa HOM05D000003 ORTHO05D000007 2.2e-09 66.6 63 42.9
CANSAT78G1658 Cannabis sativa HOM05D000003 ORTHO05D000007 2.2e-09 66.6 64 42.2
EL10Ac2g03240 Beta vulgaris HOM05D000045 ORTHO05D000695 2.9e-09 66.2 212 23.6
CAN.G1463.3 Capsicum annuum HOM05D000479 ORTHO05D000007 2.9e-09 66.2 55 50.9
Ah.10g026810 Amaranthus hybridus HOM05D000003 ORTHO05D000007 3.8e-09 65.9 58 44.8
EL10Ac6g14322 Beta vulgaris HOM05D000003 ORTHO05D000007 3.8e-09 65.9 211 26.1
CANSAT65G0002 Cannabis sativa HOM05D000003 ORTHO05D000007 3.8e-09 65.9 81 39.5
Ah.11g040280 Amaranthus hybridus HOM05D000003 ORTHO05D011611 5.0e-09 65.5 61 42.6
Ah.12g063330 Amaranthus hybridus HOM05D000003 ORTHO05D000007 5.0e-09 65.5 55 45.5
Ah.15g097110 Amaranthus hybridus HOM05D000003 ORTHO05D000007 6.5e-09 65.1 59 42.4
CANSAT54G1048 Cannabis sativa HOM05D000003 ORTHO05D000007 6.5e-09 65.1 67 46.3
Sopen07g022300 Solanum pennellii HOM05D000003 ORTHO05D000007 6.5e-09 65.1 42 61.9
Solyc10g075080.1 Solanum lycopersicum HOM05D015165 ORTHO05D011611 1.1e-08 64.3 58 43.1
CANSAT25G2390 Cannabis sativa HOM05D000003 ORTHO05D011611 1.5e-08 63.9 59 39.0
EL10Ac5g11879 Beta vulgaris HOM05D000003 ORTHO05D000007 1.9e-08 63.5 60 45.0
Solyc03g078190.1 Solanum lycopersicum HOM05D015165 ORTHO05D017089 1.9e-08 63.5 96 29.2
Ah.04g159630 Amaranthus hybridus HOM05D000003 ORTHO05D000007 2.5e-08 63.2 72 36.1
EL10As3g23362 Beta vulgaris HOM05D000003 ORTHO05D000007 2.5e-08 63.2 202 24.8
EL10Ac1g01488 Beta vulgaris HOM05D000003 ORTHO05D000007 3.2e-08 62.8 56 44.6
EL10Ac7g17161 Beta vulgaris HOM05D000003 ORTHO05D000007 3.2e-08 62.8 55 45.5
Ah.03g143450 Amaranthus hybridus HOM05D000003 ORTHO05D000007 4.2e-08 62.4 103 34.0
CANSAT25G2441 Cannabis sativa HOM05D000003 ORTHO05D000007 5.5e-08 62.0 60 50.0
CAN.G551.108 Capsicum annuum HOM05D002280 ORTHO05D011611 5.5e-08 62.0 66 36.4
CANSAT01G0784 Cannabis sativa HOM05D000003 ORTHO05D000007 9.4e-08 61.2 65 40.0
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 1.2e-07 60.8 73 37.0
EL10Ac6g14808 Beta vulgaris HOM05D000003 ORTHO05D000007 1.2e-07 60.8 200 26.5
CANSAT25G1407 Cannabis sativa HOM05D000003 ORTHO05D000007 1.6e-07 60.5 65 43.1
Hund31250 Selenicereus undatus HOM05D014118 ORTHO05D011611 1.6e-07 60.5 61 36.1
EL10Ac6g14708 Beta vulgaris HOM05D000003 ORTHO05D000007 2.1e-07 60.1 72 36.1
CANSAT56G3933 Cannabis sativa HOM05D000003 ORTHO05D000007 2.1e-07 60.1 61 39.3
EL10Ac8g19738 Beta vulgaris HOM05D000003 ORTHO05D000007 2.7e-07 59.7 60 38.3
Dinv23885 Davidia involucrata HOM05D000003 ORTHO05D000007 2.7e-07 59.7 91 34.1
CANSAT11G1056 Cannabis sativa HOM05D000003 ORTHO05D000007 3.6e-07 59.3 65 36.9
CANSAT25G3759 Cannabis sativa HOM05D000003 ORTHO05D000007 3.6e-07 59.3 65 36.9
PGSC0003DMG400035899 Solanum tuberosum HOM05D000003 ORTHO05D000007 3.6e-07 59.3 65 35.4
Ah.12g061560 Amaranthus hybridus HOM05D000003 ORTHO05D000007 6.1e-07 58.5 55 40.0
CANSAT35G0925 Cannabis sativa HOM05D000003 ORTHO05D000007 6.1e-07 58.5 104 29.8
Hund10220 Selenicereus undatus HOM05D000003 ORTHO05D000007 6.1e-07 58.5 55 32.7
PGSC0003DMG400032773 Solanum tuberosum HOM05D000003 ORTHO05D000007 8.0e-07 58.2 75 33.3
CANSAT54G2456 Cannabis sativa HOM05D000003 ORTHO05D000007 1.0e-06 57.8 65 36.9
EL10Ac3g06704 Beta vulgaris HOM05D000003 ORTHO05D000007 1.4e-06 57.4 56 41.1
CANSAT11G0988 Cannabis sativa HOM05D000003 ORTHO05D000007 1.4e-06 57.4 60 35.0
Ah.02g122310 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.8e-06 57.0 58 39.7
EL10Ac1g01770 Beta vulgaris HOM05D000003 ORTHO05D000007 1.8e-06 57.0 193 26.9
EL10Ac3g05991 Beta vulgaris HOM05D015602 ORTHO05D006373 1.8e-06 57.0 49 49.0
CAN.G265.4 Capsicum annuum HOM05D015165 ORTHO05D011611 1.8e-06 57.0 60 41.7
Hund10169 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.8e-06 57.0 97 28.9
Dinv20159 Davidia involucrata HOM05D000041 ORTHO05D000007 2.3e-06 56.6 70 38.6
Hund23554 Selenicereus undatus HOM05D000003 ORTHO05D011611 2.3e-06 56.6 65 33.8
Peaxi162Scf00118g00214 Petunia axillaris HOM05D000003 ORTHO05D000006 4.0e-06 55.8 110 34.5
Hund00727 Selenicereus undatus HOM05D063244 ORTHO05D011611 6.7e-06 55.1 47 40.4
Hund10601 Selenicereus undatus HOM05D010531 ORTHO05D000105 8.8e-06 54.7 49 44.9


User provided reference genes

Program Settings