Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 2.3e-116 422.2 205 100.0
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 2.6e-99 365.5 202 86.1
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 7.8e-88 327.4 198 76.3
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 4.2e-81 305.1 217 67.3
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 7.9e-80 300.8 208 70.2
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 1.8e-79 299.7 198 70.2
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 3.0e-79 298.9 201 71.1
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 3.9e-79 298.5 212 66.0
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 5.1e-79 298.1 196 71.9
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 4.0e-76 288.5 205 69.3
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 1.2e-75 287.0 198 69.2
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 4.5e-75 285.0 198 66.2
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 1.3e-74 283.5 204 64.2
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 2.9e-74 282.3 199 69.3
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 6.4e-74 281.2 202 63.9
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 6.4e-74 281.2 202 63.9
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 1.4e-73 280.0 203 67.5
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 1.4e-73 280.0 200 68.5
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 2.4e-73 279.3 203 71.4
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 5.5e-73 278.1 202 63.4
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 9.3e-73 277.3 198 66.7
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 1.6e-72 276.6 213 65.7
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 2.7e-72 275.8 198 65.2
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 3.5e-72 275.4 204 61.8
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 1.8e-71 273.1 200 64.0
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 6.7e-71 271.2 211 61.1
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 1.9e-70 269.6 240 54.6
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 1.9e-70 269.6 198 66.7
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.5e-70 269.2 185 66.5
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 2.5e-70 269.2 198 63.6
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 2.5e-70 269.2 205 62.9
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.3e-70 268.9 202 62.9
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 3.3e-70 268.9 205 63.4
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 3.3e-70 268.9 200 63.0
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 3.3e-70 268.9 228 59.2
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 4.3e-70 268.5 205 61.5
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 4.3e-70 268.5 198 63.6
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 4.3e-70 268.5 198 65.2
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 7.4e-70 267.7 198 63.6
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 9.6e-70 267.3 204 61.8
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 1.3e-69 266.9 203 63.5
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 2.1e-69 266.2 202 63.4
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 2.8e-69 265.8 205 63.4
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 2.8e-69 265.8 189 68.3
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 4.8e-69 265.0 203 65.0
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 6.2e-69 264.6 198 63.6
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 4.0e-68 261.9 199 63.3
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 4.0e-68 261.9 198 64.1
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 9.0e-68 260.8 197 67.0
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 1.2e-67 260.4 202 62.4
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 1.5e-67 260.0 201 62.2
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 2.0e-67 259.6 203 63.1
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 2.6e-67 259.2 202 61.4
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 2.6e-67 259.2 201 60.7
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 2.6e-67 259.2 200 61.0
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 4.5e-67 258.5 202 62.4
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 4.5e-67 258.5 202 61.4
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 5.8e-67 258.1 199 63.3
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 7.6e-67 257.7 202 60.9
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 1.3e-66 256.9 202 62.9
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 2.2e-66 256.1 201 61.7
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 2.9e-66 255.8 203 60.6
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 3.8e-66 255.4 201 60.7
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 6.5e-66 254.6 200 62.0
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 1.4e-65 253.4 200 57.5
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 2.5e-65 252.7 193 63.7
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 4.2e-65 251.9 202 60.4
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 4.2e-65 251.9 202 60.4
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 7.1e-65 251.1 203 59.6
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 1.6e-64 250.0 207 59.4
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 2.1e-64 249.6 203 60.6
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 2.7e-64 249.2 199 60.8
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 7.9e-64 247.7 199 61.8
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 1.0e-63 247.3 201 61.7
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 1.3e-63 246.9 202 58.9
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 3.9e-63 245.4 199 59.3
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 1.1e-62 243.8 200 58.5
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 1.5e-62 243.4 177 64.4
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 2.5e-62 242.7 199 60.3
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 7.4e-62 241.1 200 58.0
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 4.8e-61 238.4 199 58.8
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 6.9e-60 234.6 200 58.0
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 3.8e-58 228.8 199 57.8
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 7.9e-56 221.1 207 55.1
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 8.2e-53 211.1 148 66.9
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 2.2e-50 203.0 138 65.2
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 5.5e-49 198.4 141 62.4
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 1.0e-47 194.1 165 53.3
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 9.7e-46 187.6 170 51.8
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.7e-45 186.8 212 50.5
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 5.9e-43 178.3 154 60.4
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 1.9e-41 173.3 162 53.7
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 3.2e-41 172.6 88 97.7
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 7.2e-41 171.4 135 60.7
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 3.0e-39 166.0 194 47.4
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 2.6e-38 162.9 167 52.7
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 1.6e-35 153.7 172 51.2
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.0e-31 141.0 129 50.4
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 1.7e-29 133.7 108 57.4
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 9.1e-28 127.9 162 38.9
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 3.8e-26 122.5 113 50.4
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 8.8e-23 111.3 102 55.9
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 5.7e-22 108.6 62 72.6
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 1.7e-21 107.1 165 37.0
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 1.4e-20 104.0 194 33.0
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 2.4e-20 103.2 206 38.8
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.7e-19 99.8 77 63.6
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 3.2e-17 92.8 51 74.5
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 3.6e-16 89.4 86 54.7
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 9.2e-12 74.7 74 51.4
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 1.2e-11 74.3 49 61.2
Cre11.g467752 Chlamydomonas reinhardtii HOM05D006529 ORTHO05D008380 2.0e-11 73.6 208 26.9
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 1.3e-10 70.9 38 78.9
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 6.1e-08 62.0 54 59.3
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 1.4e-07 60.8 86 46.5
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 1.4e-07 60.8 45 62.2


User provided reference genes

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