Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003980g0110 Nicotiana tabacum HOM05D000833 ORTHO05D285881 1.1e-50 203.0 101 100.0
PGSC0003DMG400018502 Solanum tuberosum HOM05D000833 ORTHO05D000969 7.9e-17 90.5 126 44.4
CAN.G137.25 Capsicum annuum HOM05D000833 ORTHO05D000969 2.3e-16 89.0 136 42.6
CAN.G884.16 Capsicum annuum HOM05D000833 ORTHO05D000969 2.3e-16 89.0 126 44.4
Peaxi162Scf00045g00324 Petunia axillaris HOM05D000833 ORTHO05D000969 3.3e-15 85.1 126 43.7
Peaxi162Scf00803g00422 Petunia axillaris HOM05D000833 ORTHO05D000969 5.7e-15 84.3 136 41.2
Rhsim07G0134100 Rhododendron simsii HOM05D000833 ORTHO05D000969 8.2e-14 80.5 126 40.5
Peaxi162Scf00052g00332 Petunia axillaris HOM05D000833 ORTHO05D000969 1.1e-13 80.1 126 42.9
Sopen08g001330 Solanum pennellii HOM05D000833 ORTHO05D000969 1.8e-13 79.3 126 39.7
Actinidia18139 Actinidia chinensis HOM05D000833 ORTHO05D000969 3.5e-12 75.1 126 38.1
CANSAT21G0221 Cannabis sativa HOM05D000833 ORTHO05D000969 5.9e-12 74.3 126 38.1
Dinv06914 Davidia involucrata HOM05D000833 ORTHO05D000969 7.7e-12 73.9 125 38.4
Thecc.03G311800 Theobroma cacao HOM05D000833 ORTHO05D000969 1.3e-11 73.2 124 37.9
vmacro14208 Vaccinium macrocarpon HOM05D000833 ORTHO05D000969 1.3e-11 73.2 126 36.5
MSTRG.1793 Avicennia marina HOM05D000833 ORTHO05D000969 1.7e-11 72.8 126 36.5
CSS0025617 Camellia sinensis var. sinensis HOM05D000833 ORTHO05D000969 1.7e-11 72.8 126 36.5
SalBow8G2766 Salvia bowleyana HOM05D000833 ORTHO05D000969 2.2e-11 72.4 126 36.5
Oeu031076.1 Olea europaea HOM05D000833 ORTHO05D000969 3.8e-11 71.6 137 32.8
Oeu017092.1 Olea europaea HOM05D000833 ORTHO05D000969 5.0e-11 71.2 135 32.6
CAN.G773.24 Capsicum annuum HOM05D000833 ORTHO05D000969 6.5e-11 70.9 123 38.2
Duzib068G0149 Durio zibethinus HOM05D000833 ORTHO05D000969 8.5e-11 70.5 125 36.8
CSS0017013 Camellia sinensis var. sinensis HOM05D000833 ORTHO05D000969 1.1e-10 70.1 126 38.1
Cpa.g.sc16.6 Carica papaya HOM05D000833 ORTHO05D000969 1.5e-10 69.7 125 36.0
Sopen08g024800 Solanum pennellii HOM05D000833 ORTHO05D000969 1.5e-10 69.7 123 38.2
PGSC0003DMG400009320 Solanum tuberosum HOM05D000833 ORTHO05D000969 1.5e-10 69.7 123 38.2
EL10Ac5g11990 Beta vulgaris HOM05D000833 ORTHO05D000969 1.9e-10 69.3 126 35.7
Duzib205G0008 Durio zibethinus HOM05D000833 ORTHO05D000969 1.9e-10 69.3 125 36.8
Prupe.5G026100 Prunus persica HOM05D000833 ORTHO05D000969 1.9e-10 69.3 126 38.9
Atru.chr6.1543 Acer truncatum HOM05D000833 ORTHO05D000969 2.5e-10 68.9 126 36.5
Potri.001G135300 Populus trichocarpa HOM05D000833 ORTHO05D000969 2.5e-10 68.9 126 35.7
Hund11166 Selenicereus undatus HOM05D000833 ORTHO05D000969 2.5e-10 68.9 126 34.1
COL.COLO4_16916 Corchorus olitorius HOM05D000833 ORTHO05D000969 5.5e-10 67.8 125 36.0
SGA_v2.0_scaffold144G35859 Striga asiatica HOM05D000833 ORTHO05D000969 5.5e-10 67.8 132 36.4
MD06G1025000 Malus domestica HOM05D000833 ORTHO05D000969 7.2e-10 67.4 126 38.1
Gohir.D12G207700 Gossypium hirsutum HOM05D000833 ORTHO05D000969 9.4e-10 67.0 124 35.5
Gorai.008G223200 Gossypium raimondii HOM05D000833 ORTHO05D000969 9.4e-10 67.0 124 35.5
Manes.15G192700 Manihot esculenta HOM05D000833 ORTHO05D000969 9.4e-10 67.0 126 35.7
TWI60G0715 Tripterygium wilfordii HOM05D000833 ORTHO05D000969 9.4e-10 67.0 125 35.2
Gohir.A08G152900 Gossypium hirsutum HOM05D000833 ORTHO05D000969 1.2e-09 66.6 125 35.2
Ah.12g055600 Amaranthus hybridus HOM05D000833 ORTHO05D000969 1.6e-09 66.2 126 34.9
Solyc08g076160.3 Solanum lycopersicum HOM05D000833 ORTHO05D000969 2.1e-09 65.9 123 37.4
CiPaw.12G069500 Carya illinoinensis HOM05D000833 ORTHO05D000969 2.7e-09 65.5 126 36.5
ClCG10G001220 Citrullus lanatus HOM05D000833 ORTHO05D000969 2.7e-09 65.5 126 35.7
Gorai.004G181500 Gossypium raimondii HOM05D000833 ORTHO05D000969 2.7e-09 65.5 125 34.4
Gohir.D08G173800 Gossypium hirsutum HOM05D000833 ORTHO05D000969 4.7e-09 64.7 124 33.9
Lj2g0010639 Lotus japonicus HOM05D000833 ORTHO05D000969 6.1e-09 64.3 126 36.5
QL12p000003 Quercus lobata HOM05D000833 ORTHO05D000969 6.1e-09 64.3 126 36.5
RcHm_v2.0_Chr7g0212271 Rosa chinensis HOM05D000833 ORTHO05D000969 6.1e-09 64.3 126 35.7
Sed0017054 Sechium edule HOM05D000833 ORTHO05D000969 6.1e-09 64.3 136 33.1
CiPaw.11G100000 Carya illinoinensis HOM05D000833 ORTHO05D000969 8.0e-09 63.9 126 36.5
Ciclev10000243m.g Citrus clementina HOM05D000833 ORTHO05D000969 1.0e-08 63.5 125 35.2
Glyma.01G011200 Glycine max HOM05D000833 ORTHO05D000969 1.0e-08 63.5 140 35.7
Phvul.002G134200 Phaseolus vulgaris HOM05D000833 ORTHO05D000969 1.0e-08 63.5 126 36.5
Sabra01G0104700 Salix brachista HOM05D000833 ORTHO05D000969 1.0e-08 63.5 125 33.6
SalBow1G1157 Salvia bowleyana HOM05D000833 ORTHO05D000969 1.0e-08 63.5 127 33.9
SalBow1G2011 Salvia bowleyana HOM05D000833 ORTHO05D000969 1.0e-08 63.5 127 33.9
VMungo1215G1279 Vigna mungo HOM05D000833 ORTHO05D000969 1.0e-08 63.5 126 36.5
MSTRG.13898 Avicennia marina HOM05D000833 ORTHO05D000969 1.4e-08 63.2 125 34.4
QL12p000143 Quercus lobata HOM05D000833 ORTHO05D000969 1.4e-08 63.2 126 35.7
Lj7A123G18 Lonicera japonica HOM05D000833 ORTHO05D000969 1.8e-08 62.8 129 35.7
Nn3g19356 Nelumbo nucifera HOM05D000833 ORTHO05D000969 1.8e-08 62.8 124 34.7
Cfa012534 Carpinus fangiana HOM05D000833 ORTHO05D000969 2.3e-08 62.4 126 38.1
Sed0025769 Sechium edule HOM05D000833 ORTHO05D000969 2.3e-08 62.4 116 34.5
FAN13G2180 Fragaria x ananassa HOM05D000833 ORTHO05D000969 3.0e-08 62.0 126 38.1
Sc22g0001850 Simmondsia chinensis HOM05D000833 ORTHO05D000969 3.0e-08 62.0 127 36.2
TAR375G0323 Trochodendron aralioides HOM05D000833 ORTHO05D000969 3.0e-08 62.0 125 33.6
MELO3C013815.2 Cucumis melo HOM05D000833 ORTHO05D000969 4.0e-08 61.6 126 37.3
CsaV3_3G001260 Cucumis sativus L. HOM05D000833 ORTHO05D000969 4.0e-08 61.6 126 37.3
FvH4_5g23320 Fragaria vesca HOM05D000833 ORTHO05D000969 4.0e-08 61.6 126 37.3
FAN18G0895 Fragaria x ananassa HOM05D000833 ORTHO05D000969 4.0e-08 61.6 126 37.3
FAN18G3395 Fragaria x ananassa HOM05D000833 ORTHO05D000969 4.0e-08 61.6 126 37.3
vmacro00243 Vaccinium macrocarpon HOM05D000833 ORTHO05D000969 4.0e-08 61.6 126 34.9
Haze_08127 Corylus avellana HOM05D000833 ORTHO05D000969 5.2e-08 61.2 126 37.3
FAN04G0207 Fragaria x ananassa HOM05D000833 ORTHO05D000969 5.2e-08 61.2 126 37.3
FAN08G1149 Fragaria x ananassa HOM05D000833 ORTHO05D000969 5.2e-08 61.2 126 37.3
Glyma.09G209900 Glycine max HOM05D000833 ORTHO05D000969 5.2e-08 61.2 125 34.4
Potri.003G098200 Populus trichocarpa HOM05D000833 ORTHO05D000969 6.7e-08 60.8 126 36.5
MSTRG.11902 Avicennia marina HOM05D000833 ORTHO05D000969 1.1e-07 60.1 126 34.1
TPR.G19469 Trifolium pratense HOM05D000833 ORTHO05D000969 1.1e-07 60.1 127 36.2
Duzib084G0590 Durio zibethinus HOM05D000833 ORTHO05D000969 1.5e-07 59.7 124 33.9
HanXRQChr17g0558101 Helianthus annuus HOM05D000833 ORTHO05D000969 1.5e-07 59.7 127 34.6
AUR62007370 Chenopodium quinoa HOM05D000833 ORTHO05D000969 2.0e-07 59.3 126 32.5
AUR62018619 Chenopodium quinoa HOM05D000833 ORTHO05D000969 2.0e-07 59.3 126 32.5
Lsat_1_v5_gn_6_17640 Lactuca sativa HOM05D000833 ORTHO05D000969 2.0e-07 59.3 137 36.5
HanXRQChr08g0227081 Helianthus annuus HOM05D000833 ORTHO05D000969 3.3e-07 58.5 127 33.9
Sabra03G0066600 Salix brachista HOM05D000833 ORTHO05D000969 5.7e-07 57.8 126 35.7
Hund14384 Selenicereus undatus HOM05D000833 ORTHO05D000969 5.7e-07 57.8 127 29.1
unitig_46.g18382 Utricularia gibba HOM05D000833 ORTHO05D000969 5.7e-07 57.8 126 32.5
Ca_25160_v3 Cicer arietinum L. HOM05D000833 ORTHO05D000969 9.7e-07 57.0 126 33.3
ECA233G4318 Erigeron canadensis HOM05D000833 ORTHO05D000969 1.3e-06 56.6 126 33.3
Rhsim11G0029100 Rhododendron simsii HOM05D000833 ORTHO05D000969 1.7e-06 56.2 126 34.1
Lalb_Chr09g0325371 Lupinus albus HOM05D000833 ORTHO05D000969 2.2e-06 55.8 127 34.6
Migut.E01324 Erythranthe guttata HOM05D000833 ORTHO05D000969 3.7e-06 55.1 132 30.3
SGA_v2.0_scaffold111G31386 Striga asiatica HOM05D000833 ORTHO05D000969 3.7e-06 55.1 140 31.4
Aqoxy3G02140 Aquilegia oxysepala HOM05D000833 ORTHO05D000969 4.8e-06 54.7 124 33.1
Nitab4.5_0003152g0010 Nicotiana tabacum HOM05D001396 ORTHO05D000493 6.3e-06 54.3 55 52.7


User provided reference genes

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