Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 2.2e-97 359.0 186 100.0
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 6.9e-91 337.4 184 95.7
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 9.6e-77 290.4 184 81.5
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 5.8e-74 281.2 184 79.3
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 3.8e-73 278.5 184 78.3
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 1.5e-69 266.5 186 76.3
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 2.8e-60 235.7 184 64.7
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 6.3e-60 234.6 184 66.8
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 5.3e-59 231.5 185 64.3
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 9.1e-59 230.7 186 67.7
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 1.2e-58 230.3 186 63.4
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 1.5e-58 229.9 192 62.5
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 3.4e-58 228.8 187 63.6
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 5.9e-58 228.0 184 63.6
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 5.9e-58 228.0 188 62.2
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 2.2e-57 226.1 184 60.9
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 6.5e-57 224.6 185 63.8
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 1.1e-56 223.8 189 61.9
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 7.2e-56 221.1 184 59.8
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 2.7e-55 219.2 189 60.3
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 3.0e-54 215.7 188 62.2
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 5.1e-54 214.9 189 60.8
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 6.7e-54 214.5 187 58.3
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 8.8e-54 214.2 182 62.1
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 7.4e-53 211.1 188 59.0
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 9.7e-53 210.7 227 54.6
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 1.7e-52 209.9 191 59.2
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 3.7e-52 208.8 190 57.4
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 4.8e-52 208.4 188 59.0
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 6.3e-52 208.0 187 63.1
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 6.3e-52 208.0 187 63.1
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 8.2e-52 207.6 192 56.8
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 8.2e-52 207.6 187 58.8
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 8.2e-52 207.6 195 57.9
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 1.1e-51 207.2 184 60.9
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 1.8e-51 206.5 187 59.4
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.8e-51 206.5 189 57.1
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 2.4e-51 206.1 182 61.0
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 2.4e-51 206.1 191 57.6
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 2.4e-51 206.1 197 58.4
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 2.4e-51 206.1 179 60.9
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 3.1e-51 205.7 192 58.9
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 4.1e-51 205.3 187 59.9
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 7.0e-51 204.5 189 56.1
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 9.1e-51 204.1 192 56.8
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 1.2e-50 203.8 190 59.5
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 2.0e-50 203.0 192 59.4
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 2.0e-50 203.0 191 58.1
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 3.5e-50 202.2 191 58.1
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 4.5e-50 201.8 191 58.6
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 4.5e-50 201.8 187 57.2
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 1.3e-49 200.3 183 58.5
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 1.7e-49 199.9 190 57.4
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 2.2e-49 199.5 193 55.4
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 2.2e-49 199.5 191 58.1
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.9e-49 199.1 187 58.3
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 2.9e-49 199.1 193 54.9
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 3.8e-49 198.7 187 58.3
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 3.8e-49 198.7 189 56.1
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 8.5e-49 197.6 193 56.0
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 8.5e-49 197.6 190 55.3
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 1.1e-48 197.2 185 55.7
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.4e-48 196.8 187 57.8
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 1.4e-48 196.8 189 54.5
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.9e-48 196.4 187 57.8
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 2.5e-48 196.1 185 55.7
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 3.2e-48 195.7 111 88.3
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 7.2e-48 194.5 186 58.1
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 9.4e-48 194.1 132 67.4
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 8.0e-47 191.0 188 56.9
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 1.4e-46 190.3 187 56.1
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 1.8e-46 189.9 189 56.6
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 3.0e-46 189.1 186 54.8
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 3.9e-46 188.7 188 54.3
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 5.2e-46 188.3 191 54.5
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 5.2e-46 188.3 188 55.9
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 6.7e-46 188.0 187 55.1
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 6.7e-46 188.0 187 56.7
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 8.8e-46 187.6 188 51.6
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 1.1e-45 187.2 190 54.7
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 5.7e-45 184.9 190 54.7
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 5.7e-45 184.9 190 54.7
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 7.4e-45 184.5 192 55.7
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 1.3e-44 183.7 185 55.1
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 1.3e-44 183.7 185 55.1
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 1.3e-44 183.7 185 55.1
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 2.8e-44 182.6 187 52.9
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 3.7e-44 182.2 188 52.7
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 3.7e-44 182.2 131 67.2
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 6.3e-44 181.4 164 57.3
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 1.8e-43 179.9 185 54.6
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 1.8e-43 179.9 187 52.9
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 5.3e-43 178.3 187 52.4
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 9.1e-43 177.6 188 52.1
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 4.2e-40 168.7 119 67.2
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 1.2e-39 167.2 188 46.3
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.2e-39 167.2 112 69.6
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 2.7e-39 166.0 169 56.2
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 3.6e-39 165.6 187 51.3
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 6.1e-39 164.9 170 55.9
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 6.1e-39 164.9 133 57.1
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.4e-38 163.7 108 71.3
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 1.4e-35 153.7 187 46.5
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.4e-35 152.9 136 55.1
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 9.4e-32 141.0 132 53.0
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 1.2e-31 140.6 123 57.7
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 1.0e-30 137.5 181 42.5
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 2.3e-30 136.3 184 45.7
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 2.0e-29 133.3 187 41.7
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 4.8e-28 128.6 77 75.3
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 4.8e-28 128.6 92 64.1
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 1.8e-27 126.7 174 43.1
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 2.7e-26 122.9 97 54.6
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 7.7e-26 121.3 92 58.7
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 3.3e-24 115.9 110 56.4
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 8.9e-22 107.8 128 52.3
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.4e-19 100.5 66 66.7
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 7.3e-16 88.2 174 31.6
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 2.8e-15 86.3 120 42.5
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 4.4e-13 79.0 99 52.5
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 5.8e-13 78.6 127 32.3
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 2.2e-12 76.6 123 33.3
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 2.4e-11 73.2 101 48.5
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.1e-08 64.3 93 48.4
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 5.2e-06 55.5 39 66.7


User provided reference genes

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