Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 4.4e-72 274.6 151 100.0
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.2e-64 250.0 151 89.4
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 1.6e-58 229.6 126 87.3
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 2.1e-58 229.2 152 82.9
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 8.1e-58 227.3 152 82.9
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 1.1e-57 226.9 126 83.3
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 6.9e-57 224.2 151 80.8
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 9.0e-57 223.8 126 83.3
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 1.2e-56 223.4 126 83.3
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 2.0e-56 222.6 126 84.1
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 3.4e-56 221.9 126 80.2
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 1.3e-55 219.9 151 80.1
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 2.2e-55 219.2 126 81.7
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 6.4e-55 217.6 126 81.7
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 5.5e-54 214.5 126 80.2
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 5.5e-54 214.5 150 76.7
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 9.3e-54 213.8 125 81.6
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 9.3e-54 213.8 127 78.7
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 2.3e-52 209.1 126 77.8
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 3.0e-52 208.8 124 77.4
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 5.1e-52 208.0 126 77.0
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 5.1e-52 208.0 127 78.7
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 8.7e-52 207.2 124 75.8
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 8.7e-52 207.2 127 75.6
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 8.7e-52 207.2 127 77.2
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 1.5e-51 206.5 118 79.7
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 1.5e-51 206.5 127 75.6
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 1.9e-51 206.1 126 77.0
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 3.3e-51 205.3 127 76.4
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 7.4e-51 204.1 127 74.0
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 9.6e-51 203.8 126 74.6
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.3e-50 203.4 119 79.0
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 2.8e-50 202.2 127 74.0
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 3.7e-50 201.8 126 77.0
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 6.2e-50 201.1 124 75.0
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 8.1e-50 200.7 127 71.7
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 1.1e-49 200.3 126 73.0
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 1.4e-49 199.9 126 73.0
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 5.3e-49 198.0 126 73.8
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 6.9e-49 197.6 127 71.7
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 6.9e-49 197.6 126 72.2
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 1.5e-48 196.4 127 72.4
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 1.5e-48 196.4 127 72.4
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 2.6e-48 195.7 125 71.2
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 1.0e-47 193.7 127 70.9
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 1.0e-47 193.7 129 69.8
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.7e-47 193.0 127 67.7
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 3.8e-47 191.8 125 72.8
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 4.9e-47 191.4 127 66.9
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 1.9e-46 189.5 127 71.7
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 3.2e-46 188.7 152 61.8
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 3.2e-46 188.7 120 71.7
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 3.2e-46 188.7 119 71.4
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 3.2e-46 188.7 119 71.4
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 3.2e-46 188.7 126 68.3
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 4.2e-46 188.3 107 81.3
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 4.2e-46 188.3 126 68.3
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 4.2e-46 188.3 121 73.6
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 5.5e-46 188.0 122 70.5
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 5.5e-46 188.0 126 67.5
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 7.1e-46 187.6 100 84.0
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 2.7e-45 185.7 127 70.1
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 6.0e-45 184.5 121 69.4
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 1.0e-44 183.7 114 71.1
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.8e-44 183.0 125 68.8
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 3.9e-44 181.8 167 56.3
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 2.5e-43 179.1 128 68.0
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 3.3e-43 178.7 118 68.6
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 4.3e-43 178.3 127 67.7
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 1.6e-42 176.4 127 65.4
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 3.7e-42 175.3 118 69.5
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 1.8e-41 172.9 118 67.8
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 5.3e-41 171.4 127 63.8
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 5.3e-41 171.4 118 68.6
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 6.9e-41 171.0 119 63.9
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 9.0e-41 170.6 125 60.0
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 1.5e-40 169.9 116 69.0
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 2.0e-40 169.5 120 62.5
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 2.6e-40 169.1 118 64.4
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 4.5e-40 168.3 126 61.1
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 4.5e-40 168.3 125 61.6
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 5.9e-40 167.9 102 71.6
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 5.9e-40 167.9 102 71.6
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 5.9e-40 167.9 167 51.5
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 5.9e-40 167.9 120 64.2
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 7.6e-40 167.5 125 60.8
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 7.6e-40 167.5 125 61.6
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 7.6e-40 167.5 125 61.6
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 7.6e-40 167.5 125 61.6
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 7.6e-40 167.5 125 61.6
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 7.6e-40 167.5 118 65.3
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 1.0e-39 167.2 126 61.1
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 1.3e-39 166.8 116 69.0
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 2.2e-39 166.0 126 59.5
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 2.9e-39 165.6 125 56.8
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 2.9e-39 165.6 117 63.2
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 2.9e-39 165.6 113 64.6
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 2.9e-39 165.6 118 66.1
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 3.8e-39 165.2 117 65.8
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 5.0e-39 164.9 125 57.6
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 5.0e-39 164.9 126 59.5
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 6.5e-39 164.5 102 70.6
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 7.2e-38 161.0 104 72.1
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 7.2e-38 161.0 104 72.1
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 1.6e-37 159.8 109 63.3
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 3.6e-37 158.7 107 70.1
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 1.0e-36 157.1 119 63.9
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 1.0e-36 157.1 118 62.7
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 1.3e-36 156.8 98 69.4
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 1.8e-36 156.4 104 68.3
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 5.1e-36 154.8 126 58.7
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 6.7e-36 154.5 120 59.2
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 6.3e-34 147.9 87 78.2
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 2.2e-31 139.4 111 61.3
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 2.9e-31 139.0 84 73.8
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 1.8e-25 119.8 97 50.5
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.4e-25 119.4 78 64.1
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 2.0e-24 116.3 101 51.5
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 1.7e-23 113.2 61 83.6
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 6.5e-23 111.3 101 48.5
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.4e-20 103.6 61 75.4
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 3.0e-20 102.4 61 73.8
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 3.9e-20 102.1 97 47.4
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 8.8e-20 100.9 85 60.0
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 1.7e-18 96.7 98 48.0
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.7e-18 96.7 61 70.5
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.4e-17 92.8 67 61.2
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 7.7e-16 87.8 63 66.7
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 7.7e-16 87.8 85 49.4
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 3.8e-15 85.5 66 62.1
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 8.5e-15 84.3 67 59.7
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 1.9e-14 83.2 57 64.9
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 5.2e-12 75.1 59 61.0
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 1.2e-11 73.9 49 67.3
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 9.7e-11 70.9 43 67.4
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 6.3e-10 68.2 116 30.2
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 2.2e-07 59.7 96 33.3
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 4.2e-06 55.5 34 64.7


User provided reference genes

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