Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.5e-101 372.9 188 100.0
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 5.3e-99 364.4 186 98.4
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 5.5e-88 327.8 188 89.4
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 1.8e-86 322.8 188 87.8
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 5.3e-83 311.2 186 87.6
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 1.0e-73 280.4 179 76.5
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 3.8e-73 278.5 188 72.9
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 3.8e-73 278.5 187 74.3
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 6.8e-70 267.7 167 76.6
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 6.8e-70 267.7 167 76.6
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 2.0e-69 266.2 158 80.4
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 4.4e-69 265.0 192 68.2
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 5.7e-69 264.6 190 68.4
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 7.5e-69 264.2 186 67.7
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 1.7e-68 263.1 190 68.4
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 1.7e-68 263.1 174 70.1
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 4.8e-68 261.5 174 70.7
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 8.3e-68 260.8 178 68.5
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 1.1e-67 260.4 186 67.2
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 1.1e-67 260.4 180 70.0
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 1.1e-67 260.4 177 68.9
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 2.4e-67 259.2 177 70.1
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 3.1e-67 258.8 165 73.3
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 4.1e-67 258.5 165 73.9
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 5.4e-67 258.1 181 65.2
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 7.0e-67 257.7 172 70.3
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 7.0e-67 257.7 172 68.0
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 7.0e-67 257.7 165 72.7
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 9.1e-67 257.3 170 70.6
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 1.6e-66 256.5 186 66.1
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 2.0e-66 256.1 170 71.2
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 2.0e-66 256.1 186 66.1
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 2.7e-66 255.8 183 67.8
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 2.7e-66 255.8 178 70.2
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 3.5e-66 255.4 189 64.6
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 7.7e-66 254.2 172 70.3
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 7.7e-66 254.2 195 64.6
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 1.0e-65 253.8 186 65.6
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 1.0e-65 253.8 192 66.7
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 1.3e-65 253.4 165 70.3
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 1.7e-65 253.1 173 74.6
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 5.0e-65 251.5 191 66.5
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 1.9e-64 249.6 178 68.5
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 2.5e-64 249.2 166 69.3
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 5.5e-64 248.1 204 60.8
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 5.5e-64 248.1 177 68.4
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 2.1e-63 246.1 178 62.9
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 2.8e-63 245.7 189 63.5
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 3.6e-63 245.4 165 69.1
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 3.6e-63 245.4 165 69.7
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 6.1e-63 244.6 172 70.3
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 8.0e-63 244.2 165 68.5
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 1.4e-62 243.4 165 68.5
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 1.8e-62 243.0 165 67.9
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 1.8e-62 243.0 162 71.0
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 2.3e-62 242.7 165 68.5
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 3.0e-62 242.3 190 63.7
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 3.0e-62 242.3 190 63.7
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 3.0e-62 242.3 157 73.9
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 4.0e-62 241.9 165 69.7
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 1.2e-61 240.4 168 68.5
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 2.0e-61 239.6 165 67.9
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 2.0e-61 239.6 192 62.0
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 3.4e-61 238.8 160 69.4
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 4.4e-61 238.4 165 66.7
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 5.7e-61 238.0 158 69.0
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 1.3e-60 236.9 158 70.9
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 2.8e-60 235.7 158 70.3
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 5.4e-59 231.5 167 67.7
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 9.2e-59 230.7 265 50.6
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 4.5e-58 228.4 163 70.6
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 4.5e-58 228.4 197 57.9
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 4.3e-56 221.9 174 64.9
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 4.3e-56 221.9 177 61.0
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 2.8e-55 219.2 164 65.2
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 8.0e-55 217.6 189 58.2
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 1.5e-53 213.4 153 66.7
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 2.6e-53 212.6 161 59.6
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 5.7e-53 211.5 138 71.0
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 1.3e-52 210.3 125 81.6
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 1.2e-50 203.8 144 65.3
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 1.2e-47 193.7 165 58.2
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 1.6e-47 193.4 140 68.6
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 2.1e-47 193.0 158 57.6
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 2.8e-47 192.6 161 61.5
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 1.1e-46 190.7 167 50.9
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 2.3e-46 189.5 157 54.8
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 6.8e-46 188.0 198 49.0
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 6.8e-46 188.0 97 95.9
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 2.2e-44 183.0 97 90.7
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 8.3e-44 181.0 158 53.2
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 9.2e-43 177.6 125 70.4
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 3.5e-42 175.6 119 68.9
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 6.6e-41 171.4 177 53.7
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 1.9e-40 169.9 98 86.7
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 2.1e-39 166.4 132 56.1
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 6.2e-39 164.9 183 44.3
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 5.2e-38 161.8 157 52.9
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 6.4e-36 154.8 111 68.5
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 1.4e-35 153.7 115 64.3
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 1.9e-35 153.3 162 48.1
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 2.4e-35 152.9 135 59.3
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 7.1e-35 151.4 109 63.3
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 9.2e-35 151.0 118 64.4
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 1.6e-34 150.2 112 67.0
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 3.9e-33 145.6 102 68.6
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 8.6e-33 144.4 88 75.0
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 8.1e-31 137.9 97 68.0
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 2.9e-28 129.4 75 85.3
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 1.1e-27 127.5 130 50.8
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 4.6e-26 122.1 140 46.4
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 5.6e-24 115.2 98 61.2
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 2.7e-18 96.3 155 31.6
Hma1.2p1_0443F.1_g154040 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 3.0e-17 92.8 78 56.4
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 5.1e-17 92.0 94 50.0
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 1.1e-16 90.9 49 87.8
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 9.3e-11 71.2 50 62.0
AT5G10605 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 2.4e-06 56.6 36 69.4


User provided reference genes

Program Settings