Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003959g0080 Nicotiana tabacum HOM05D000361 ORTHO05D008190 1.4e-34 149.1 75 100.0
Oeu022079.1 Olea europaea HOM05D000361 ORTHO05D008190 6.1e-22 107.1 64 82.8
CAN.G523.41 Capsicum annuum HOM05D000361 ORTHO05D008190 5.3e-18 94.0 48 100.0
Nitab4.5_0000863g0120 Nicotiana tabacum HOM05D000361 ORTHO05D008190 5.3e-18 94.0 48 100.0
Sopen01g047990 Solanum pennellii HOM05D000361 ORTHO05D008190 5.3e-18 94.0 48 100.0
Haze_10576 Corylus avellana HOM05D000361 ORTHO05D008190 1.6e-17 92.4 48 97.9
Hma1.2p1_0784F.1_g217180 Hydrangea macrophylla HOM05D000361 ORTHO05D008190 1.6e-17 92.4 48 97.9
MD05G1047800 Malus domestica HOM05D000361 ORTHO05D008190 1.6e-17 92.4 48 97.9
PGSC0003DMG400012572 Solanum tuberosum HOM05D000361 ORTHO05D008190 2.6e-17 91.7 48 97.9
CiPaw.05G032700 Carya illinoinensis HOM05D000361 ORTHO05D008190 3.5e-17 91.3 48 95.8
Cc02_g21180 Coffea canephora HOM05D000361 ORTHO05D008190 3.5e-17 91.3 48 95.8
Atru.chr6.1214 Acer truncatum HOM05D000361 ORTHO05D008190 4.5e-17 90.9 48 95.8
Actinidia24006 Actinidia chinensis HOM05D000361 ORTHO05D008190 4.5e-17 90.9 48 95.8
GSVIVG01022631001 Vitis vinifera HOM05D000361 ORTHO05D008190 4.5e-17 90.9 48 95.8
PSO675G7150 Papaver somniferum HOM05D000361 ORTHO05D008190 5.9e-17 90.5 48 95.8
Peaxi162Scf01060g00132 Petunia axillaris HOM05D000361 ORTHO05D008190 5.9e-17 90.5 48 95.8
RhsimUnG0105100 Rhododendron simsii HOM05D000361 ORTHO05D008190 5.9e-17 90.5 48 93.8
RhsimUnG0187700 Rhododendron simsii HOM05D000361 ORTHO05D008190 5.9e-17 90.5 48 93.8
Solyc01g105530.3 Solanum lycopersicum HOM05D000361 ORTHO05D008190 5.9e-17 90.5 46 100.0
FvH4_2g10130 Fragaria vesca HOM05D000361 ORTHO05D008190 1.3e-16 89.4 48 93.8
FAN15G1148 Fragaria x ananassa HOM05D000361 ORTHO05D008190 1.3e-16 89.4 48 93.8
FAN20G1792 Fragaria x ananassa HOM05D000361 ORTHO05D008190 1.3e-16 89.4 48 93.8
FAN24G1062 Fragaria x ananassa HOM05D000361 ORTHO05D008190 1.3e-16 89.4 48 93.8
SalBow5G3846 Salvia bowleyana HOM05D000361 ORTHO05D008190 1.3e-16 89.4 48 93.8
ClCG09G015670 Citrullus lanatus HOM05D000361 ORTHO05D008190 1.7e-16 89.0 48 91.7
FAN27G0220 Fragaria x ananassa HOM05D000361 ORTHO05D008190 1.7e-16 89.0 48 91.7
Lsat_1_v5_gn_9_116821 Lactuca sativa HOM05D000361 ORTHO05D008190 1.7e-16 89.0 48 93.8
Lj6g0015129 Lotus japonicus HOM05D000361 ORTHO05D008190 1.7e-16 89.0 48 93.8
Nn5g29999 Nelumbo nucifera HOM05D000361 ORTHO05D008190 1.7e-16 89.0 48 93.8
RcHm_v2.0_Chr6g0267231 Rosa chinensis HOM05D000361 ORTHO05D008190 1.7e-16 89.0 48 93.8
vmacro01841 Vaccinium macrocarpon HOM05D000361 ORTHO05D008190 1.7e-16 89.0 48 93.8
arahy.Tifrunner.gnm1.ann1.2R0HNS Arachis hypogaea HOM05D000361 ORTHO05D008190 2.2e-16 88.6 48 91.7
arahy.Tifrunner.gnm1.ann1.E9LA23 Arachis hypogaea HOM05D000361 ORTHO05D008190 2.2e-16 88.6 48 91.7
PSO541G0659 Papaver somniferum HOM05D000361 ORTHO05D008190 2.2e-16 88.6 48 93.8
PSO541G1218 Papaver somniferum HOM05D000361 ORTHO05D008190 2.2e-16 88.6 48 93.8
Thecc.02G134000 Theobroma cacao HOM05D000361 ORTHO05D008190 2.2e-16 88.6 48 93.8
GSVIVG01022621001 Vitis vinifera HOM05D000361 ORTHO05D008190 2.2e-16 88.6 48 93.8
Ah.01g010080 Amaranthus hybridus HOM05D000361 ORTHO05D008190 2.9e-16 88.2 48 93.8
AL3G45720 Arabidopsis lyrata HOM05D000361 ORTHO05D008190 2.9e-16 88.2 48 93.8
AT2G14050 Arabidopsis thaliana HOM05D000361 ORTHO05D008190 2.9e-16 88.2 48 93.8
BcaB08g34549 Brassica carinata HOM05D000361 ORTHO05D008190 2.9e-16 88.2 48 93.8
A03p45130 Brassica napus HOM05D000361 ORTHO05D008190 2.9e-16 88.2 48 93.8
BraA03t13648Z Brassica rapa HOM05D000361 ORTHO05D008190 2.9e-16 88.2 48 93.8
CARHR104240 Cardamine hirsuta HOM05D000361 ORTHO05D008190 2.9e-16 88.2 48 93.8
ECA240G4379 Erigeron canadensis HOM05D000361 ORTHO05D008190 2.9e-16 88.2 48 91.7
Lalb_Chr20g0122951 Lupinus albus HOM05D000361 ORTHO05D008190 2.9e-16 88.2 48 91.7
Prupe.8G065100 Prunus persica HOM05D000361 ORTHO05D008190 2.9e-16 88.2 48 93.8
PGR142G0624 Punica granatum HOM05D000361 ORTHO05D008190 2.9e-16 88.2 48 91.7
THA.LOC104819509 Tarenaya hassleriana HOM05D000361 ORTHO05D008190 2.9e-16 88.2 48 91.7
CSS0016473 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D008190 3.8e-16 87.8 48 91.7
Ca_00146_v3 Cicer arietinum L. HOM05D000361 ORTHO05D008190 3.8e-16 87.8 48 91.7
Glyma.15G055000 Glycine max HOM05D000361 ORTHO05D008190 3.8e-16 87.8 48 91.7
Psat1g215840 Pisum sativum HOM05D000361 ORTHO05D008190 3.8e-16 87.8 48 91.7
Eucgr.I02633 Eucalyptus grandis HOM05D000361 ORTHO05D008190 5.0e-16 87.4 48 91.7
HanXRQChr03g0067551 Helianthus annuus HOM05D000361 ORTHO05D008190 5.0e-16 87.4 48 91.7
Medtr2g009190 Medicago truncatula HOM05D000361 ORTHO05D008190 5.0e-16 87.4 48 89.6
SGA_v2.0_scaffold83G26335 Striga asiatica HOM05D000361 ORTHO05D008190 5.0e-16 87.4 48 89.6
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 5.0e-16 87.4 48 89.6
Sp3g27310 Schrenkiella parvula HOM05D000361 ORTHO05D008190 6.5e-16 87.0 48 93.8
Ciclev10029860m.g Citrus clementina HOM05D000361 ORTHO05D008190 8.5e-16 86.7 48 91.7
CsaV3_7G006750 Cucumis sativus L. HOM05D000361 ORTHO05D008190 8.5e-16 86.7 48 89.6
MSTRG.20289 Avicennia marina HOM05D000361 ORTHO05D008190 1.1e-15 86.3 48 91.7
Carub.0003s2831 Capsella rubella HOM05D000361 ORTHO05D008190 1.1e-15 86.3 48 91.7
COL.COLO4_32315 Corchorus olitorius HOM05D000361 ORTHO05D008190 1.1e-15 86.3 48 91.7
Manes.10G104300 Manihot esculenta HOM05D000361 ORTHO05D008190 1.1e-15 86.3 48 91.7
Phvul.006G204900 Phaseolus vulgaris HOM05D000361 ORTHO05D008190 1.1e-15 86.3 48 89.6
Sed0008836 Sechium edule HOM05D000361 ORTHO05D008190 1.1e-15 86.3 48 87.5
Hund00081 Selenicereus undatus HOM05D000361 ORTHO05D008190 1.1e-15 86.3 48 91.7
TAR376G0717 Trochodendron aralioides HOM05D000361 ORTHO05D008190 1.1e-15 86.3 48 89.6
BcaC01g03107 Brassica carinata HOM05D000361 ORTHO05D008190 1.5e-15 85.9 48 91.7
C03p55990 Brassica napus HOM05D000361 ORTHO05D008190 1.5e-15 85.9 48 91.7
BolC3t17883H Brassica oleracea HOM05D000361 ORTHO05D008190 1.5e-15 85.9 48 91.7
Migut.B00581 Erythranthe guttata HOM05D000361 ORTHO05D008190 1.5e-15 85.9 48 89.6
Thhalv10022581m.g Eutrema salsugineum HOM05D000361 ORTHO05D008190 1.5e-15 85.9 48 91.7
Lj9A350G62 Lonicera japonica HOM05D000361 ORTHO05D008190 1.5e-15 85.9 48 87.5
Potri.019G014403 Populus trichocarpa HOM05D000361 ORTHO05D008190 1.9e-15 85.5 48 87.5
Aa31LG8G12490 Aethionema arabicum HOM05D000361 ORTHO05D008190 2.5e-15 85.1 48 89.6
Duzib052G0813 Durio zibethinus HOM05D003001 ORTHO05D008190 2.5e-15 85.1 48 89.6
Gohir.A12G016000 Gossypium hirsutum HOM05D000361 ORTHO05D008190 2.5e-15 85.1 48 87.5
Gohir.D12G016300 Gossypium hirsutum HOM05D000361 ORTHO05D008190 2.5e-15 85.1 48 87.5
Gorai.008G016500 Gossypium raimondii HOM05D000361 ORTHO05D008190 2.5e-15 85.1 48 87.5
DCAR_021877 Daucus carota HOM05D000361 ORTHO05D008190 3.2e-15 84.7 48 89.6
AUR62010162 Chenopodium quinoa HOM05D000361 ORTHO05D008190 4.2e-15 84.3 48 89.6
Sabra19G0028800 Salix brachista HOM05D000361 ORTHO05D008190 4.2e-15 84.3 48 87.5
EL10Ac9g21521 Beta vulgaris HOM05D000361 ORTHO05D008190 5.5e-15 84.0 48 87.5
Sc08g0003720 Simmondsia chinensis HOM05D000361 ORTHO05D008190 5.5e-15 84.0 48 87.5
Aqoxy6G00715 Aquilegia oxysepala HOM05D000361 ORTHO05D008190 7.2e-15 83.6 48 87.5
Cpa.g.c31478.2 Carica papaya HOM05D000361 ORTHO05D008190 9.4e-15 83.2 48 87.5
AUR62013162 Chenopodium quinoa HOM05D000361 ORTHO05D008190 9.4e-15 83.2 48 87.5
GSVIVG01022626001 Vitis vinifera HOM05D000361 ORTHO05D008190 9.4e-15 83.2 47 89.4
ATR0684G185 Amborella trichopoda HOM05D000361 ORTHO05D008190 4.7e-14 80.9 48 81.2
SEGI_16098 Sequoiadendron giganteum HOM05D000361 ORTHO05D008190 4.7e-14 80.9 48 79.2
TWI14G0190 Tripterygium wilfordii HOM05D000361 ORTHO05D008190 4.7e-14 80.9 48 85.4
HPP92_004759 Vanilla planifolia HOM05D000361 ORTHO05D008190 6.1e-14 80.5 48 83.3
SHI20332 Sapria himalayana HOM05D000361 ORTHO05D008190 3.0e-13 78.2 48 79.2
Pp3c8_2220 Physcomitrium patens HOM05D000361 ORTHO05D008190 3.4e-12 74.7 48 72.9
Zm00001eb279300 Zea mays HOM05D000361 ORTHO05D008190 5.7e-12 73.9 48 77.1
Mapoly0080s0056 Marchantia polymorpha HOM05D000361 ORTHO05D008190 1.3e-11 72.8 48 70.8
SMO013G0030 Selaginella moellendorffii HOM05D000361 ORTHO05D008190 6.3e-11 70.5 48 68.8
Oeu007985.1 Olea europaea HOM05D000361 ORTHO05D008190 9.1e-10 66.6 49 73.5
CBR_g50446 Chara braunii HOM05D000019 ORTHO05D000048 3.5e-09 64.7 46 69.6


User provided reference genes

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