Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 6.6e-202 707.2 370 100.0
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 6.6e-186 654.1 397 88.7
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 1.7e-162 576.2 348 87.6
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 8.1e-160 567.4 401 78.8
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 1.4e-159 566.6 403 78.4
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 1.8e-159 566.2 354 84.7
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 4.2e-140 501.9 377 75.3
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 5.0e-133 478.4 338 74.6
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 3.2e-132 475.7 361 70.4
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 4.6e-131 471.9 341 72.7
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 6.1e-131 471.5 350 71.4
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 6.1e-131 471.5 341 72.4
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 5.1e-130 468.4 348 70.1
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 1.1e-129 467.2 325 74.8
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 4.3e-129 465.3 355 70.4
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 1.3e-128 463.8 317 75.1
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 2.4e-127 459.5 348 71.6
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 1.2e-126 457.2 339 71.1
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 1.2e-126 457.2 312 75.6
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 1.5e-126 456.8 306 78.1
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 2.0e-126 456.4 333 72.7
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 3.4e-126 455.7 311 76.2
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 3.4e-126 455.7 321 74.1
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 5.0e-125 451.8 334 71.0
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 6.5e-125 451.4 346 70.5
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 1.1e-124 450.7 360 66.1
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 9.4e-124 447.6 317 73.8
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 1.6e-123 446.8 312 75.0
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 2.1e-123 446.4 398 63.1
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 6.1e-123 444.9 317 70.0
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 6.1e-123 444.9 317 72.2
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 6.1e-123 444.9 326 70.9
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 1.8e-122 443.4 344 67.7
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 3.9e-122 442.2 303 73.3
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 8.8e-122 441.0 315 71.1
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 8.8e-122 441.0 355 67.0
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 2.0e-121 439.9 344 67.4
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 2.0e-121 439.9 344 67.4
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 2.0e-121 439.9 306 73.2
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 4.4e-121 438.7 386 62.2
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 1.3e-120 437.2 337 68.2
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 1.7e-120 436.8 325 69.5
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 1.7e-120 436.8 316 70.6
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 2.2e-120 436.4 364 64.0
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 2.2e-120 436.4 319 72.1
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 4.8e-120 435.3 316 70.6
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 6.3e-120 434.9 335 68.4
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 1.1e-119 434.1 333 68.8
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 1.1e-119 434.1 364 64.8
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 1.4e-119 433.7 348 66.7
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 1.4e-119 433.7 323 69.0
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 1.4e-119 433.7 349 66.2
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 1.8e-119 433.3 307 73.6
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 2.4e-119 433.0 346 66.5
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 3.1e-119 432.6 315 70.5
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 4.1e-119 432.2 303 72.9
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 5.3e-119 431.8 307 73.3
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 7.0e-119 431.4 314 71.0
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 7.0e-119 431.4 336 66.7
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 1.2e-118 430.6 306 73.2
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 2.6e-118 429.5 322 68.3
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 3.5e-118 429.1 337 66.8
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 4.5e-118 428.7 340 66.5
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 7.7e-118 427.9 355 64.5
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 5.5e-116 421.8 329 67.8
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 3.6e-115 419.1 328 67.1
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 3.6e-115 419.1 325 68.0
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 3.6e-115 419.1 312 69.9
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 3.9e-114 415.6 317 70.3
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 6.7e-114 414.8 315 68.9
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 1.1e-113 414.1 313 69.0
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 2.8e-112 409.5 305 70.8
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 3.7e-112 409.1 329 63.5
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 1.8e-111 406.8 311 71.1
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 2.4e-111 406.4 322 67.7
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 2.4e-111 406.4 311 70.7
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 4.1e-111 405.6 379 60.9
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 4.1e-111 405.6 305 69.8
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 3.5e-110 402.5 322 67.4
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 3.5e-110 402.5 313 64.9
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 5.9e-110 401.7 322 67.4
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 1.7e-109 400.2 281 74.0
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 3.2e-108 396.0 316 66.5
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 5.5e-108 395.2 338 63.0
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 1.2e-107 394.0 311 62.7
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 2.0e-105 386.7 308 64.6
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 8.3e-104 381.3 275 72.7
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 7.0e-103 378.3 296 67.2
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 4.5e-102 375.6 392 55.6
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 4.2e-100 369.0 278 68.3
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 2.3e-98 363.2 337 56.4
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 4.4e-97 359.0 296 62.2
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 9.8e-97 357.8 317 60.6
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 4.9e-96 355.5 325 59.1
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 5.4e-95 352.1 308 58.8
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 2.3e-93 346.7 366 54.4
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 6.6e-93 345.1 341 55.4
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 2.5e-92 343.2 240 75.8
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 2.5e-92 343.2 281 62.6
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 1.2e-86 324.3 219 76.7
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 2.5e-84 316.6 224 72.3
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 3.9e-77 292.7 228 68.9
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 6.2e-75 285.4 230 70.0
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 5.2e-74 282.3 212 68.4
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 1.5e-73 280.8 198 74.7
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 1.6e-70 270.8 339 47.8
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 4.6e-70 269.2 331 46.5
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 8.6e-69 265.0 291 54.0
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 1.6e-67 260.8 318 45.6
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 1.9e-60 237.3 273 48.0
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 6.2e-59 232.3 301 45.8
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 1.6e-51 207.6 175 58.9
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 4.8e-51 206.1 279 44.1
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 1.9e-47 194.1 344 37.2
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 5.5e-39 166.0 130 63.1
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 5.7e-28 129.4 107 62.6
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 4.8e-27 126.3 98 60.2
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 6.3e-27 125.9 103 62.1
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 6.3e-27 125.9 103 62.1
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 6.7e-21 105.9 98 57.1
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 6.7e-21 105.9 98 57.1
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 5.7e-20 102.8 98 55.1
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 4.8e-19 99.8 90 54.4
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 4.5e-17 93.2 95 56.8
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 1.3e-11 75.1 51 72.5
arahy.Tifrunner.gnm1.ann1.P2KY5D Arachis hypogaea HOM05D006342 ORTHO05D008155 1.3e-08 65.1 79 46.8


User provided reference genes

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