Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003952g0050 Nicotiana tabacum HOM05D003822 ORTHO05D004484 2.9e-139 498.8 304 100.0
Nitab4.5_0002641g0020 Nicotiana tabacum HOM05D003822 ORTHO05D004484 8.0e-121 437.6 304 91.1
Solyc06g007700.4 Solanum lycopersicum HOM05D003822 ORTHO05D004484 1.8e-104 383.3 304 81.9
Peaxi162Scf00995g00322 Petunia axillaris HOM05D003822 ORTHO05D004484 8.9e-104 380.9 302 73.8
Sopen06g002590 Solanum pennellii HOM05D003822 ORTHO05D004484 6.6e-99 364.8 303 81.8
Peaxi162Scf00372g00722 Petunia axillaris HOM05D003822 ORTHO05D004484 6.8e-96 354.8 301 78.7
PGSC0003DMG400020658 Solanum tuberosum HOM05D003822 ORTHO05D004484 1.2e-92 344.0 313 71.9
CAN.G181.49 Capsicum annuum HOM05D003822 ORTHO05D004484 5.0e-91 338.6 311 77.8
Hma1.2p1_0635F.1_g193140 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 2.6e-87 326.2 320 60.3
Gorai.007G162100 Gossypium raimondii HOM05D003822 ORTHO05D004484 3.4e-87 325.9 312 65.1
Hma1.2p1_2403F.1_g321420 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 3.4e-87 325.9 308 66.6
TAR362G1102 Trochodendron aralioides HOM05D003822 ORTHO05D004484 5.8e-87 325.1 303 67.0
Gohir.D11G153200 Gossypium hirsutum HOM05D003822 ORTHO05D004484 7.5e-87 324.7 312 65.1
COL.COLO4_29926 Corchorus olitorius HOM05D003822 ORTHO05D004484 1.9e-85 320.1 327 58.1
TPR.G6564 Trifolium pratense HOM05D003822 ORTHO05D004484 1.9e-85 320.1 311 61.7
Ciclev10016105m.g Citrus clementina HOM05D003822 ORTHO05D004484 1.6e-84 317.0 308 69.5
Gohir.A11G145000 Gossypium hirsutum HOM05D003822 ORTHO05D004484 2.7e-84 316.2 312 62.2
Actinidia34522 Actinidia chinensis HOM05D003822 ORTHO05D004484 3.5e-84 315.8 296 71.3
Nn7g37555 Nelumbo nucifera HOM05D003822 ORTHO05D004484 6.0e-84 315.1 309 62.1
TAR633G2284 Trochodendron aralioides HOM05D003822 ORTHO05D004484 2.3e-83 313.2 312 60.3
vmacro14674 Vaccinium macrocarpon HOM05D003822 ORTHO05D004484 8.6e-83 311.2 298 65.1
Oeu013421.2 Olea europaea HOM05D003822 ORTHO05D004484 4.3e-82 308.9 302 67.5
Cc02_g30690 Coffea canephora HOM05D003822 ORTHO05D004484 7.3e-82 308.1 295 68.8
Manes.12G058903 Manihot esculenta HOM05D003822 ORTHO05D004484 2.1e-81 306.6 304 72.7
SGA_v2.0_scaffold77G25327 Striga asiatica HOM05D003822 ORTHO05D004484 2.1e-81 306.6 300 64.7
Thecc.01G205200 Theobroma cacao HOM05D003822 ORTHO05D004484 2.1e-81 306.6 312 63.1
VMungo1080G0920 Vigna mungo HOM05D003822 ORTHO05D004484 4.7e-81 305.4 304 63.8
Actinidia23132 Actinidia chinensis HOM05D003822 ORTHO05D004484 6.2e-81 305.1 317 56.2
Dinv28779 Davidia involucrata HOM05D003822 ORTHO05D004484 2.3e-80 303.1 301 67.4
Prupe.1G200400 Prunus persica HOM05D003822 ORTHO05D004484 2.3e-80 303.1 306 64.1
Glyma.15G027800 Glycine max HOM05D003822 ORTHO05D004484 4.0e-80 302.4 311 62.1
Lalb_Chr24g0396641 Lupinus albus HOM05D003822 ORTHO05D004484 4.0e-80 302.4 320 66.6
QL10p052081 Quercus lobata HOM05D003822 ORTHO05D004484 4.0e-80 302.4 320 58.8
ECA236G4570 Erigeron canadensis HOM05D003822 ORTHO05D004484 1.2e-79 300.8 312 60.9
Eucgr.A00039 Eucalyptus grandis HOM05D003822 ORTHO05D004484 1.2e-79 300.8 318 57.2
MSTRG.17947 Avicennia marina HOM05D003822 ORTHO05D004484 2.0e-79 300.1 303 62.7
Duzib211G0255 Durio zibethinus HOM05D003822 ORTHO05D004484 2.6e-79 299.7 312 62.8
TWI36G1391 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 3.4e-79 299.3 310 60.0
TWI36G1709 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 3.4e-79 299.3 310 60.0
Glyma.13G346400 Glycine max HOM05D003822 ORTHO05D004484 4.4e-79 298.9 315 61.0
ECA248G1190 Erigeron canadensis HOM05D002050 ORTHO05D001949 7.6e-79 298.1 285 60.7
Manes.13G057600 Manihot esculenta HOM05D003822 ORTHO05D004484 7.6e-79 298.1 296 62.2
Ca_01239_v3 Cicer arietinum L. HOM05D003822 ORTHO05D004484 9.9e-79 297.7 314 61.8
FAN08G2486 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.2e-78 296.6 313 61.0
Medtr2g099360 Medicago truncatula HOM05D003822 ORTHO05D004484 2.2e-78 296.6 317 67.8
Manes.12G057507 Manihot esculenta HOM05D003822 ORTHO05D004484 2.9e-78 296.2 296 72.6
Manes.12G057905 Manihot esculenta HOM05D003822 ORTHO05D004484 2.9e-78 296.2 296 72.6
Sabra14G0133100 Salix brachista HOM05D003822 ORTHO05D004484 6.4e-78 295.0 301 63.5
RcHm_v2.0_Chr7g0230961 Rosa chinensis HOM05D003822 ORTHO05D004484 8.3e-78 294.7 308 67.9
MELO3C017788.2 Cucumis melo HOM05D003822 ORTHO05D004484 1.1e-77 294.3 302 65.2
Eucgr.H00681 Eucalyptus grandis HOM05D003822 ORTHO05D004484 4.1e-77 292.4 329 57.8
Nn1g09539 Nelumbo nucifera HOM05D003822 ORTHO05D004484 4.1e-77 292.4 296 62.2
HanXRQChr10g0281191 Helianthus annuus HOM05D003822 ORTHO05D004484 5.4e-77 292.0 311 58.2
Cpa.g.sc8.23 Carica papaya HOM05D003822 ORTHO05D004484 2.7e-76 289.7 303 61.4
Lsat_1_v5_gn_8_98601 Lactuca sativa HOM05D003822 ORTHO05D004484 4.6e-76 288.9 303 66.3
Ciclev10021425m.g Citrus clementina HOM05D003822 ORTHO05D004484 6.0e-76 288.5 315 60.0
TAR365G1107 Trochodendron aralioides HOM05D003822 ORTHO05D004484 1.0e-75 287.7 283 67.1
Glyma.11G125400 Glycine max HOM05D003822 ORTHO05D004484 3.0e-75 286.2 294 58.5
Sc19g0002790 Simmondsia chinensis HOM05D003822 ORTHO05D004484 5.1e-75 285.4 301 61.1
Haze_01421 Corylus avellana HOM05D003822 ORTHO05D004484 1.9e-74 283.5 320 61.2
THA.LOC104819024 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 1.9e-74 283.5 305 65.2
Duzib133G0954 Durio zibethinus HOM05D003822 ORTHO05D004484 3.3e-74 282.7 307 59.9
TWI18G0659 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 3.3e-74 282.7 304 59.5
arahy.Tifrunner.gnm1.ann1.0NAL6S Arachis hypogaea HOM05D003822 ORTHO05D004484 4.3e-74 282.3 305 65.2
CiPaw.02G103400 Carya illinoinensis HOM05D003822 ORTHO05D004484 7.3e-74 281.6 309 62.8
FvH4_5g32960 Fragaria vesca HOM05D003822 ORTHO05D004484 7.3e-74 281.6 308 66.6
Cfa015215 Carpinus fangiana HOM05D003822 ORTHO05D004484 1.2e-73 280.8 303 63.0
Atru.chr6.3488 Acer truncatum HOM05D003822 ORTHO05D004484 1.6e-73 280.4 310 66.5
arahy.Tifrunner.gnm1.ann1.1KAH27 Arachis hypogaea HOM05D003822 ORTHO05D004484 1.6e-73 280.4 305 64.9
FAN18G3379 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.6e-73 280.4 318 62.6
MD04G1046700 Malus domestica HOM05D003822 ORTHO05D004484 2.8e-73 279.6 309 65.4
Potri.017G018400 Populus trichocarpa HOM05D003822 ORTHO05D004484 8.1e-73 278.1 310 61.0
Duzib138G1354 Durio zibethinus HOM05D003822 ORTHO05D004484 1.1e-72 277.7 309 62.8
Lj3g0026330 Lotus japonicus HOM05D003822 ORTHO05D004484 1.1e-72 277.7 321 62.6
Aqoxy2G04159 Aquilegia oxysepala HOM05D003822 ORTHO05D004484 1.8e-72 276.9 310 61.0
Lalb_Chr22g0352031 Lupinus albus HOM05D003822 ORTHO05D004484 3.1e-72 276.2 301 55.8
VMungo1127G1572 Vigna mungo HOM05D003822 ORTHO05D004484 6.8e-72 275.0 294 56.1
Aa31LG5G18100 Aethionema arabicum HOM05D003822 ORTHO05D004484 1.2e-71 274.2 311 62.7
PSO017G3256 Papaver somniferum HOM05D003822 ORTHO05D004484 1.5e-71 273.9 320 63.1
FAN04G1289 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.6e-71 273.1 310 62.9
PSO837G0022 Papaver somniferum HOM05D003822 ORTHO05D004484 4.4e-71 272.3 320 62.8
Sed0005976 Sechium edule HOM05D003822 ORTHO05D004484 4.4e-71 272.3 311 66.2
THA.LOC104822456 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 7.6e-71 271.6 314 57.3
CiPaw.01G173700 Carya illinoinensis HOM05D003822 ORTHO05D004484 1.3e-70 270.8 304 61.5
Phvul.005G155400 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 1.3e-70 270.8 312 59.6
Sed0021377 Sechium edule HOM05D003822 ORTHO05D004484 2.2e-70 270.0 321 62.3
AL3G18900 Arabidopsis lyrata HOM05D003822 ORTHO05D004484 2.9e-70 269.6 303 63.4
EL10Ac3g06027 Beta vulgaris HOM05D003822 ORTHO05D004484 8.4e-70 268.1 309 60.8
Sabra07G0108500 Salix brachista HOM05D003822 ORTHO05D004484 1.4e-69 267.3 298 56.4
Sabra07G0120800 Salix brachista HOM05D003822 ORTHO05D004484 1.4e-69 267.3 298 56.4
unitig_22.g5196 Utricularia gibba HOM05D003822 ORTHO05D004484 2.4e-69 266.5 312 55.1
CsaV3_4G002560 Cucumis sativus L. HOM05D003822 ORTHO05D004484 4.2e-69 265.8 303 63.4
Lj3g0024368 Lotus japonicus HOM05D003822 ORTHO05D004484 7.1e-69 265.0 298 63.1
Carub.0003s0711 Capsella rubella HOM05D003822 ORTHO05D004484 9.3e-69 264.6 312 62.8
RcHm_v2.0_Chr1g0340971 Rosa chinensis HOM05D003822 ORTHO05D004484 1.6e-68 263.8 309 57.9
HanXRQChr01g0010521 Helianthus annuus HOM05D003822 ORTHO05D004484 2.1e-68 263.5 307 57.0
Thhalv10021215m.g Eutrema salsugineum HOM05D003822 ORTHO05D004484 2.7e-68 263.1 307 61.2
AT3G07560 Arabidopsis thaliana HOM05D003822 ORTHO05D004484 3.5e-68 262.7 322 55.6
BraA05t22796Z Brassica rapa HOM05D003822 ORTHO05D004484 4.6e-68 262.3 301 60.8
Potri.014G197200 Populus trichocarpa HOM05D003822 ORTHO05D004484 6.0e-68 261.9 317 61.8
A05p40650 Brassica napus HOM05D003822 ORTHO05D004484 1.7e-67 260.4 294 60.9
CDE05G3137 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 3.0e-67 259.6 296 62.5
Sabra17G0014400 Salix brachista HOM05D000455 ORTHO05D000434 3.9e-67 259.2 300 62.0
C03p42940 Brassica napus HOM05D003822 ORTHO05D004484 1.1e-66 257.7 321 57.0
Migut.N00690 Erythranthe guttata HOM05D003822 ORTHO05D004484 1.5e-66 257.3 313 66.5
Ah.07g202460 Amaranthus hybridus HOM05D003822 ORTHO05D004484 1.9e-66 256.9 305 54.1
C05p59760 Brassica napus HOM05D003822 ORTHO05D004484 1.9e-66 256.9 299 62.2
CDE02G4798 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 2.5e-66 256.5 297 66.7
BcaC01g04277 Brassica carinata HOM05D003822 ORTHO05D004484 3.3e-66 256.1 316 58.2
BcaB03g14694 Brassica carinata HOM05D003822 ORTHO05D004484 9.6e-66 254.6 330 58.2
BolC5t34630H Brassica oleracea HOM05D003822 ORTHO05D004484 1.6e-65 253.8 310 64.2
Sp3g06480 Schrenkiella parvula HOM05D003822 ORTHO05D004484 1.6e-65 253.8 329 54.1
PGR102G0947 Punica granatum HOM05D003822 ORTHO05D004484 2.1e-65 253.4 324 53.1
Hund03185 Selenicereus undatus HOM05D003822 ORTHO05D004484 1.1e-64 251.1 310 52.9
A03p35330 Brassica napus HOM05D003822 ORTHO05D004484 3.1e-64 249.6 316 61.1
CSS0026869 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 4.0e-64 249.2 293 61.4
AUR62002363 Chenopodium quinoa HOM05D003822 ORTHO05D004484 6.9e-64 248.4 311 55.0
BolC3t16562H Brassica oleracea HOM05D003822 ORTHO05D004484 9.0e-64 248.1 315 60.6
PGR083G0513 Punica granatum HOM05D003822 ORTHO05D004484 9.0e-64 248.1 297 63.6
MD00G1127600 Malus domestica HOM05D003822 ORTHO05D004484 7.6e-63 245.0 302 53.0
CANSAT56G4141 Cannabis sativa HOM05D003822 ORTHO05D004484 9.9e-63 244.6 320 59.7
CANSAT11G1915 Cannabis sativa HOM05D003822 ORTHO05D004484 3.8e-62 242.7 315 63.2
HPP92_015668 Vanilla planifolia HOM05D003822 ORTHO05D004484 6.4e-62 241.9 294 59.9
ClCG07G011660 Citrullus lanatus HOM05D003822 ORTHO05D004484 1.9e-61 240.4 407 48.6
MBI02_g24302_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 3.2e-61 239.6 325 51.7
Sabra17G0002300 Salix brachista HOM05D000455 ORTHO05D000434 1.0e-59 234.6 347 53.0
PGSC0003DMG400020552 Solanum tuberosum HOM05D003822 ORTHO05D004484 1.0e-59 234.6 157 82.2
Lsat_1_v5_gn_5_175601 Lactuca sativa HOM05D003822 ORTHO05D004484 4.3e-58 229.2 318 51.3
ATR0752G090 Amborella trichopoda HOM05D003822 ORTHO05D004484 6.2e-57 225.3 292 55.1
Os03g0786000 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 2.4e-56 223.4 297 50.5
SGA_v2.0_scaffold95G28678 Striga asiatica HOM05D003822 ORTHO05D004484 4.0e-56 222.6 239 66.1
BcaB04g21287 Brassica carinata HOM05D003822 ORTHO05D004484 4.5e-55 219.2 300 51.7
Os07g0152800 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 5.8e-55 218.8 293 56.3
BcaC05g29550 Brassica carinata HOM05D003822 ORTHO05D004484 7.6e-55 218.4 294 53.7
Zm00001eb059960 Zea mays HOM05D003822 ORTHO05D004484 1.3e-54 217.6 296 53.7
Oeu020438.1 Olea europaea HOM05D003822 ORTHO05D004484 6.0e-52 208.8 147 70.7
CSS0006211 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 7.9e-52 208.4 223 59.2
Manes.11G127100 Manihot esculenta HOM05D003822 ORTHO05D004484 5.1e-51 205.7 265 51.7
AUR62023822 Chenopodium quinoa HOM05D003822 ORTHO05D004484 1.5e-50 204.1 296 50.0
Zm00001eb117520 Zea mays HOM05D003822 ORTHO05D004484 7.4e-50 201.8 315 47.0
Lj2C1109G11 Lonicera japonica HOM05D003822 ORTHO05D004484 1.6e-49 200.7 312 51.6
Gorai.N001500 Gossypium raimondii HOM05D003822 ORTHO05D004484 6.2e-49 198.7 308 44.8
Actinidia11655 Actinidia chinensis HOM05D003822 ORTHO05D004484 9.0e-48 194.9 164 66.5
SEGI_01562 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 5.8e-47 192.2 307 52.4
SEGI_07594 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 5.8e-47 192.2 318 47.8
MBI18_g24478_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 1.9e-45 187.2 279 49.5
Phvul.011G052000 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 1.3e-43 181.0 176 60.2
BolC1t05546H Brassica oleracea HOM05D003822 ORTHO05D004484 4.8e-41 172.6 251 52.2
Manes.12G058104 Manihot esculenta HOM05D003822 ORTHO05D004484 4.8e-41 172.6 102 78.4
BraA01t04376Z Brassica rapa HOM05D003822 ORTHO05D004484 6.2e-41 172.2 150 61.3
Psat5g291600 Pisum sativum HOM05D003822 ORTHO05D004484 1.4e-40 171.0 236 61.4
MSTRG.12733 Avicennia marina HOM05D003822 ORTHO05D004484 4.8e-33 146.0 230 46.1
MSTRG.12731 Avicennia marina HOM05D003822 ORTHO05D004484 6.9e-32 142.1 99 68.7
Mapoly0080s0067 Marchantia polymorpha HOM05D003822 ORTHO05D004484 5.9e-31 139.0 336 50.0
Pp3c11_19790 Physcomitrium patens HOM05D003822 ORTHO05D004484 5.0e-30 136.0 311 44.1
unitig_8.g3681 Utricularia gibba HOM05D003822 ORTHO05D004484 8.5e-30 135.2 157 65.0
CBR_g38951 Chara braunii HOM05D003822 ORTHO05D004484 5.5e-29 132.5 334 45.8
CSS0030404 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 1.2e-28 131.3 80 83.8
SMO146G0020 Selaginella moellendorffii HOM05D003822 ORTHO05D004484 2.1e-28 130.6 305 43.9
AagrBONN_evm.TU.Sc2ySwM_368.3329 Anthoceros agrestis HOM05D003822 ORTHO05D004484 5.1e-27 125.9 299 50.5
Oeu020439.1 Olea europaea HOM05D003822 ORTHO05D004484 2.0e-26 124.0 76 82.9
FAN01G1095 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.2e-25 120.6 212 51.4
Hma1.2p1_0161F.1_g071790 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 4.8e-25 119.4 193 44.6
CARHR082240 Cardamine hirsuta HOM05D003822 ORTHO05D004484 2.4e-24 117.1 203 58.6
Atru.chr4.1339 Acer truncatum HOM05D003822 ORTHO05D004484 3.6e-20 103.2 82 67.1
CARHR082220 Cardamine hirsuta HOM05D003822 ORTHO05D004484 4.7e-20 102.8 109 51.4
FAN06G0586 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.1e-18 98.2 127 52.0
Thecc.04G171800 Theobroma cacao HOM05D003822 ORTHO05D004484 5.7e-18 95.9 95 52.6
Eucgr.B03613 Eucalyptus grandis HOM05D003822 ORTHO05D004484 7.4e-18 95.5 69 71.0
Eucgr.C02476 Eucalyptus grandis HOM05D003822 ORTHO05D004484 7.4e-18 95.5 63 74.6
Gohir.A07G157900 Gossypium hirsutum HOM05D003822 ORTHO05D004484 7.4e-18 95.5 90 58.9
FvH4_7g08180 Fragaria vesca HOM05D003822 ORTHO05D046505 1.1e-16 91.7 75 66.7
MCO15G241 Micromonas commoda HOM05D003822 ORTHO05D004484 1.0e-14 85.1 310 39.4
Cre13.g574700 Chlamydomonas reinhardtii HOM05D003822 ORTHO05D004484 2.9e-14 83.6 62 62.9
FAN10G3558 Fragaria x ananassa HOM05D003822 ORTHO05D046505 5.0e-14 82.8 314 31.5
FAN01G2016 Fragaria x ananassa HOM05D003822 ORTHO05D004484 6.1e-12 75.9 45 82.2
SEGI_40649 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.3e-09 68.2 87 51.7
ATR0737G020 Amborella trichopoda HOM05D003822 ORTHO05D004484 1.6e-07 61.2 73 49.3
CBR_g50337 Chara braunii HOM05D003822 ORTHO05D004484 2.0e-07 60.8 264 41.7
FAN06G2565 Fragaria x ananassa HOM05D003822 ORTHO05D001690 2.0e-07 60.8 77 50.6
SEGI_02285 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.7e-06 57.8 150 44.7
Zm00001eb392350 Zea mays HOM05D000367 ORTHO05D001438 8.5e-06 55.5 44 65.9


User provided reference genes

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