Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003949g0040 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.7e-65 252.7 141 100.0
Nitab4.5_0003949g0030 Nicotiana tabacum HOM05D003565 ORTHO05D003943 2.4e-64 248.8 140 97.9
Nitab4.5_0000493g0100 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.5e-45 186.4 147 73.5
Nitab4.5_0000194g0060 Nicotiana tabacum HOM05D003565 ORTHO05D003943 9.3e-40 167.2 150 66.7
Nitab4.5_0000493g0080 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.5e-34 149.8 140 65.0
Nitab4.5_0000194g0050 Nicotiana tabacum HOM05D003565 ORTHO05D003943 5.9e-34 147.9 140 63.6
Nitab4.5_0000930g0010 Nicotiana tabacum HOM05D003565 ORTHO05D003943 1.3e-33 146.7 145 66.9
CAN.G261.3 Capsicum annuum HOM05D003565 ORTHO05D003943 5.0e-33 144.8 156 62.2
Nitab4.5_0000493g0090 Nicotiana tabacum HOM05D003565 ORTHO05D003943 5.5e-32 141.4 140 62.1
Nitab4.5_0000513g0180 Nicotiana tabacum HOM05D003565 ORTHO05D003943 5.5e-32 141.4 159 60.4
Peaxi162Scf00246g01219 Petunia axillaris HOM05D003565 ORTHO05D003943 5.5e-32 141.4 162 59.9
Nitab4.5_0005362g0030 Nicotiana tabacum HOM05D003565 ORTHO05D003943 4.6e-31 138.3 145 64.1
PGSC0003DMG400011334 Solanum tuberosum HOM05D003565 ORTHO05D003943 2.3e-30 136.0 140 60.7
Solyc01g066680.3 Solanum lycopersicum HOM05D003565 ORTHO05D003943 1.4e-27 126.7 155 54.8
Sopen01g028300 Solanum pennellii HOM05D003565 ORTHO05D003943 2.0e-26 122.9 140 55.0
CiPaw.02G081300 Carya illinoinensis HOM05D003565 ORTHO05D003943 3.0e-22 109.0 149 49.7
Hma1.2p1_1807F.1_g303350 Hydrangea macrophylla HOM05D003565 ORTHO05D003943 2.6e-21 105.9 150 51.3
Dinv29764 Davidia involucrata HOM05D003565 ORTHO05D003943 5.7e-21 104.8 153 51.0
MSTRG.10106 Avicennia marina HOM05D003565 ORTHO05D003943 8.2e-20 100.9 154 46.8
FvH4_4g18480 Fragaria vesca HOM05D003565 ORTHO05D003943 1.8e-19 99.8 159 44.0
FAN12G1574 Fragaria x ananassa HOM05D003565 ORTHO05D003943 1.8e-19 99.8 159 44.0
FAN12G0358 Fragaria x ananassa HOM05D003565 ORTHO05D003943 2.4e-19 99.4 159 44.0
Gorai.011G191400 Gossypium raimondii HOM05D003565 ORTHO05D003943 3.1e-19 99.0 154 46.8
Gohir.D10G171300 Gossypium hirsutum HOM05D003565 ORTHO05D003943 4.1e-19 98.6 154 46.1
Thecc.04G287000 Theobroma cacao HOM05D003565 ORTHO05D003943 5.3e-19 98.2 151 48.3
Actinidia28386 Actinidia chinensis HOM05D003565 ORTHO05D003943 6.9e-19 97.8 142 47.2
Cfa015405 Carpinus fangiana HOM05D003565 ORTHO05D003943 1.2e-18 97.1 154 45.5
Gohir.A10G165200 Gossypium hirsutum HOM05D003565 ORTHO05D003943 2.0e-18 96.3 143 46.9
SGA_v2.0_scaffold18G08345 Striga asiatica HOM05D003565 ORTHO05D003943 2.0e-18 96.3 161 44.7
FAN17G2113 Fragaria x ananassa HOM05D003565 ORTHO05D003943 2.6e-18 95.9 159 43.4
Cpa.g.sc16.191 Carica papaya HOM05D003565 ORTHO05D003943 3.4e-18 95.5 144 48.6
Duzib151G1023 Durio zibethinus HOM05D003565 ORTHO05D003943 5.9e-18 94.7 150 47.3
Haze_01182 Corylus avellana HOM05D003565 ORTHO05D003943 2.9e-17 92.4 139 47.5
Potri.010G012400 Populus trichocarpa HOM05D003565 ORTHO05D003943 2.9e-17 92.4 150 46.7
Sabra10G0007900 Salix brachista HOM05D003565 ORTHO05D003943 2.9e-17 92.4 146 46.6
Migut.O00777 Erythranthe guttata HOM05D003565 ORTHO05D003943 5.0e-17 91.7 148 45.9
CiPaw.02G081400 Carya illinoinensis HOM05D003565 ORTHO05D003943 6.5e-17 91.3 152 43.4
CiPaw.02G081500 Carya illinoinensis HOM05D003565 ORTHO05D003943 6.5e-17 91.3 152 43.4
RcHm_v2.0_Chr4g0422991 Rosa chinensis HOM05D003565 ORTHO05D003943 6.5e-17 91.3 165 42.4
vmacro15222 Vaccinium macrocarpon HOM05D003565 ORTHO05D003943 6.5e-17 91.3 147 47.6
GSVIVG01035140001 Vitis vinifera HOM05D003565 ORTHO05D003943 1.4e-16 90.1 152 46.7
COL.COLO4_13836 Corchorus olitorius HOM05D003565 ORTHO05D003943 1.9e-16 89.7 157 46.5
MBI18_g24867_MAGBIO Magnolia biondii HOM05D003565 ORTHO05D003943 1.9e-16 89.7 155 44.5
ECA240G0767 Erigeron canadensis HOM05D003565 ORTHO05D003943 3.2e-16 89.0 148 44.6
HanXRQChr13g0420001 Helianthus annuus HOM05D003565 ORTHO05D003943 7.2e-16 87.8 152 44.1
SalBow2G0621 Salvia bowleyana HOM05D003565 ORTHO05D003943 2.1e-15 86.3 146 41.8
Prupe.1G133700 Prunus persica HOM05D003565 ORTHO05D003943 3.6e-15 85.5 148 42.6
SalBow2G2654 Salvia bowleyana HOM05D003565 ORTHO05D003943 3.6e-15 85.5 161 41.0
Cfa015408 Carpinus fangiana HOM05D003565 ORTHO05D003943 4.7e-15 85.1 157 43.9
Cc03_g01690 Coffea canephora HOM05D003565 ORTHO05D003943 6.1e-15 84.7 151 45.7
PSO210G5566 Papaver somniferum HOM05D003565 ORTHO05D003943 1.4e-14 83.6 155 43.9
PSO832G2395 Papaver somniferum HOM05D003565 ORTHO05D003943 1.4e-14 83.6 155 43.9
Rhsim02G0008000 Rhododendron simsii HOM05D003565 ORTHO05D003943 1.4e-14 83.6 147 44.2
MD00G1127800 Malus domestica HOM05D003565 ORTHO05D003943 3.9e-14 82.0 164 43.9
Actinidia14291 Actinidia chinensis HOM05D003565 ORTHO05D003943 5.2e-14 81.6 139 46.0
Nitab4.5_0000194g0080 Nicotiana tabacum HOM05D003565 ORTHO05D003943 5.2e-14 81.6 70 65.7
THA.LOC104820292 Tarenaya hassleriana HOM05D003565 ORTHO05D003943 5.2e-14 81.6 163 42.3
CSS0017850 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 1.5e-13 80.1 152 48.7
CANSAT78G1552 Cannabis sativa HOM05D003565 ORTHO05D003943 2.0e-13 79.7 151 43.7
Nitab4.5_0000194g0070 Nicotiana tabacum HOM05D003565 ORTHO05D003943 2.0e-13 79.7 70 62.9
Prupe.1G133600 Prunus persica HOM05D003565 ORTHO05D003943 2.0e-13 79.7 158 44.3
CSS0008161 Camellia sinensis var. sinensis HOM05D003565 ORTHO05D003943 2.6e-13 79.3 161 46.0
TAR362G0267 Trochodendron aralioides HOM05D003565 ORTHO05D003943 7.4e-13 77.8 152 41.4
CiPaw.02G059200 Carya illinoinensis HOM05D003565 ORTHO05D003943 1.3e-12 77.0 148 38.5
CsaV3_3G014750 Cucumis sativus L. HOM05D003565 ORTHO05D003943 2.2e-12 76.3 146 39.7
Oeu064291.1 Olea europaea HOM05D003565 ORTHO05D003943 8.2e-12 74.3 163 39.9
Lalb_Chr15g0083411 Lupinus albus HOM05D003565 ORTHO05D003943 1.4e-11 73.6 150 40.0
CiPaw.02G058900 Carya illinoinensis HOM05D003565 ORTHO05D003943 2.4e-11 72.8 148 36.5
MELO3C006673.2 Cucumis melo HOM05D003565 ORTHO05D003943 2.4e-11 72.8 147 36.1
PGR004G0277 Punica granatum HOM05D003565 ORTHO05D003943 2.4e-11 72.8 118 44.9
PGR004G2171 Punica granatum HOM05D003565 ORTHO05D003943 2.4e-11 72.8 118 44.9
Cfa021269 Carpinus fangiana HOM05D003565 ORTHO05D003943 3.1e-11 72.4 139 40.3
PGR004G2879 Punica granatum HOM05D003565 ORTHO05D003943 3.1e-11 72.4 119 43.7
Sed0004032 Sechium edule HOM05D003565 ORTHO05D003943 4.1e-11 72.0 147 39.5
HanXRQChr03g0088811 Helianthus annuus HOM05D003565 ORTHO05D003943 5.3e-11 71.6 120 42.5
Carub.0003s1639 Capsella rubella HOM05D003565 ORTHO05D003943 7.0e-11 71.2 130 43.1
ClCG05G006170 Citrullus lanatus HOM05D003565 ORTHO05D003943 9.1e-11 70.9 146 35.6
Glyma.09G043500 Glycine max HOM05D003565 ORTHO05D003943 9.1e-11 70.9 150 39.3
QL06p009754 Quercus lobata HOM05D003565 ORTHO05D003943 9.1e-11 70.9 150 38.0
QL93p0060_0027 Quercus lobata HOM05D003565 ORTHO05D003943 1.2e-10 70.5 148 38.5
Lsat_1_v5_gn_6_95321 Lactuca sativa HOM05D003565 ORTHO05D003943 1.6e-10 70.1 147 40.1
DCAR_027062 Daucus carota HOM05D003565 ORTHO05D003943 2.0e-10 69.7 151 37.1
DCAR_027064 Daucus carota HOM05D003565 ORTHO05D003943 2.0e-10 69.7 151 37.1
AL3G29580 Arabidopsis lyrata HOM05D003565 ORTHO05D003943 2.6e-10 69.3 120 40.8
CiPaw.02G081600 Carya illinoinensis HOM05D003565 ORTHO05D003943 2.6e-10 69.3 131 38.9
QL06p009717 Quercus lobata HOM05D003565 ORTHO05D003943 2.6e-10 69.3 148 37.8
QL06p009725 Quercus lobata HOM05D003565 ORTHO05D003943 2.6e-10 69.3 84 51.2
Psat1g155160 Pisum sativum HOM05D003565 ORTHO05D003943 3.5e-10 68.9 148 39.2
QL06p009790 Quercus lobata HOM05D003565 ORTHO05D003943 3.5e-10 68.9 153 37.9
QL06p009796 Quercus lobata HOM05D003565 ORTHO05D003943 3.5e-10 68.9 137 39.4
QL93p0060_0003 Quercus lobata HOM05D003565 ORTHO05D003943 3.5e-10 68.9 148 37.8
QL06p009778 Quercus lobata HOM05D003565 ORTHO05D003943 4.5e-10 68.6 148 37.8
Medtr2g436350 Medicago truncatula HOM05D003565 ORTHO05D003943 7.7e-10 67.8 148 36.5
AT3G16660 Arabidopsis thaliana HOM05D003565 ORTHO05D003943 1.0e-09 67.4 124 41.9
BcaC09g48620 Brassica carinata HOM05D003565 ORTHO05D003943 1.0e-09 67.4 148 37.8
Oeu027151.1 Olea europaea HOM05D003565 ORTHO05D003943 1.0e-09 67.4 149 39.6
Phvul.009G249400 Phaseolus vulgaris HOM05D003565 ORTHO05D003943 1.3e-09 67.0 150 36.7
QL06p009701 Quercus lobata HOM05D003565 ORTHO05D003943 1.7e-09 66.6 150 38.0
QL93p0060_0019 Quercus lobata HOM05D003565 ORTHO05D003943 1.7e-09 66.6 150 38.0
Lj6g0014140 Lotus japonicus HOM05D003565 ORTHO05D003943 2.2e-09 66.2 141 38.3
QL06p009739 Quercus lobata HOM05D003565 ORTHO05D003943 2.2e-09 66.2 148 37.2
Aa31LG8G3780 Aethionema arabicum HOM05D003565 ORTHO05D003943 2.9e-09 65.9 119 39.5
CARHR091910 Cardamine hirsuta HOM05D003565 ORTHO05D003943 6.5e-09 64.7 158 34.2
TWI09G1223 Tripterygium wilfordii HOM05D003565 ORTHO05D003943 6.5e-09 64.7 154 40.3
QL93p0060_0047 Quercus lobata HOM05D003565 ORTHO05D003943 8.5e-09 64.3 150 37.3
CiPaw.02G059300 Carya illinoinensis HOM05D003565 ORTHO05D003943 1.1e-08 63.9 129 36.4
Ciclev10006409m.g Citrus clementina HOM05D003565 ORTHO05D003943 1.9e-08 63.2 132 41.7
Thhalv10021522m.g Eutrema salsugineum HOM05D003565 ORTHO05D003943 2.5e-08 62.8 144 35.4
Carub.0002s1293 Capsella rubella HOM05D003565 ORTHO05D003943 3.2e-08 62.4 146 37.7
Oeu027152.1 Olea europaea HOM05D003565 ORTHO05D003943 3.2e-08 62.4 128 39.1
FvH4_4g18430 Fragaria vesca HOM05D003565 ORTHO05D003943 4.2e-08 62.0 158 38.6
PGR004G2038 Punica granatum HOM05D003565 ORTHO05D003943 4.2e-08 62.0 117 39.3
CARHR150150 Cardamine hirsuta HOM05D003565 ORTHO05D003943 5.5e-08 61.6 140 38.6
FAN12G0988 Fragaria x ananassa HOM05D003565 ORTHO05D003943 9.4e-08 60.8 159 37.1
HanXRQChr08g0214541 Helianthus annuus HOM05D003565 ORTHO05D003943 9.4e-08 60.8 136 38.2
Carub.0003s1640 Capsella rubella HOM05D003565 ORTHO05D003943 1.2e-07 60.5 159 36.5
FAN12G2280 Fragaria x ananassa HOM05D003565 ORTHO05D003943 1.6e-07 60.1 159 37.1
Oeu026321.1 Olea europaea HOM05D003565 ORTHO05D003943 1.6e-07 60.1 154 36.4
MELO3C035189.2 Cucumis melo HOM05D003565 ORTHO05D003943 2.1e-07 59.7 152 36.2
AL3G29590 Arabidopsis lyrata HOM05D003565 ORTHO05D003943 2.7e-07 59.3 157 35.0
Ciclev10006885m.g Citrus clementina HOM05D003565 ORTHO05D003943 3.6e-07 58.9 142 40.1
QL06p009664 Quercus lobata HOM05D003565 ORTHO05D003943 3.6e-07 58.9 62 53.2
TPR.G31280 Trifolium pratense HOM05D003565 ORTHO05D003943 3.6e-07 58.9 119 37.0
Sed0026730 Sechium edule HOM05D003565 ORTHO05D003943 6.1e-07 58.2 139 35.3
AT3G16670 Arabidopsis thaliana HOM05D003565 ORTHO05D003943 8.0e-07 57.8 146 34.9
HanXRQChr03g0089351 Helianthus annuus HOM05D003565 ORTHO05D003943 1.4e-06 57.0 137 39.4
VMungo1309G1767 Vigna mungo HOM05D003565 ORTHO05D003943 1.8e-06 56.6 115 35.7
HanXRQChr03g0088801 Helianthus annuus HOM05D003565 ORTHO05D003943 2.3e-06 56.2 135 37.0
CARHR091930 Cardamine hirsuta HOM05D003565 ORTHO05D003943 4.0e-06 55.5 146 33.6
HanXRQChr05g0130321 Helianthus annuus HOM05D003565 ORTHO05D003943 4.0e-06 55.5 116 39.7
CARHR150160 Cardamine hirsuta HOM05D003565 ORTHO05D003943 5.2e-06 55.1 146 33.6
HanXRQChr08g0214531 Helianthus annuus HOM05D003565 ORTHO05D003943 5.2e-06 55.1 143 35.0
HPP92_006917 Vanilla planifolia HOM05D003565 ORTHO05D003943 6.7e-06 54.7 149 34.9
Eucgr.H03941 Eucalyptus grandis HOM05D003565 ORTHO05D003943 8.8e-06 54.3 160 35.6


User provided reference genes

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