Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003945g0010 Nicotiana tabacum HOM05D003430 ORTHO05D004809 5.9e-244 847.0 411 100.0
Peaxi162Scf00456g00037 Petunia axillaris HOM05D003430 ORTHO05D004809 1.2e-209 733.0 461 80.7
Solyc00g500241.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 9.9e-191 670.2 601 61.2
Ah.10g028080 Amaranthus hybridus HOM05D003430 ORTHO05D004809 1.3e-185 653.3 497 69.4
Aa31csc1081G20 Aethionema arabicum HOM05D003430 ORTHO05D004809 8.7e-179 630.6 474 70.5
Solyc00g052430.2 Solanum lycopersicum HOM05D003430 ORTHO05D004809 2.5e-178 629.0 375 83.7
HanXRQMTg0579531 Helianthus annuus HOM05D003430 ORTHO05D004809 3.1e-176 622.1 538 62.6
DCAR_032431 Daucus carota HOM05D003430 ORTHO05D004809 4.9e-174 614.8 460 69.8
Solyc00g500224.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 4.9e-174 614.8 603 57.7
SGA_v2.0_scaffold245G44667 Striga asiatica HOM05D003430 ORTHO05D004809 2.1e-169 599.4 577 58.8
ATMG00180 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 1.4e-168 596.7 464 68.8
CARHR282710 Cardamine hirsuta HOM05D003430 ORTHO05D004809 1.8e-168 596.3 464 68.8
CARHR288640 Cardamine hirsuta HOM05D003430 ORTHO05D004809 1.8e-168 596.3 464 68.8
A04p09460 Brassica napus HOM05D003430 ORTHO05D004809 5.3e-168 594.7 464 68.5
BraSC177t45748Z Brassica rapa HOM05D003430 ORTHO05D004809 5.3e-168 594.7 464 68.5
Cfa023013 Carpinus fangiana HOM05D003430 ORTHO05D004809 2.0e-167 592.8 439 70.6
Lalb_Chr00c21g0406111 Lupinus albus HOM05D003430 ORTHO05D004809 7.6e-167 590.9 464 68.3
HanXRQChr00c0055g0571401 Helianthus annuus HOM05D003430 ORTHO05D004809 1.7e-166 589.7 460 67.6
CANSAT16G0003 Cannabis sativa HOM05D003430 ORTHO05D004809 1.9e-165 586.3 460 68.5
RcHm_v2.0_MTg0498431 Rosa chinensis HOM05D003430 ORTHO05D004809 2.5e-165 585.9 461 68.3
Dinv06724 Davidia involucrata HOM05D003430 ORTHO05D004809 7.4e-162 574.3 541 59.0
Medtr0082s0260 Medicago truncatula HOM05D003430 ORTHO05D004809 1.8e-160 569.7 644 52.3
Nitab4.5_0001127g0210 Nicotiana tabacum HOM05D003430 ORTHO05D004809 2.2e-158 562.8 397 74.1
Gorai.001G162300 Gossypium raimondii HOM05D003430 ORTHO05D004809 9.7e-154 547.4 452 65.5
Ah.01g011780 Amaranthus hybridus HOM05D003430 ORTHO05D004809 1.8e-152 543.1 476 62.0
ECA039G0023 Erigeron canadensis HOM05D003430 ORTHO05D004809 6.1e-140 501.5 556 52.0
HanXRQChr09g0250621 Helianthus annuus HOM05D003430 ORTHO05D004809 1.3e-134 483.8 460 58.0
TPR.G13784 Trifolium pratense HOM05D003430 ORTHO05D004809 3.0e-131 472.6 401 64.1
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 2.2e-129 466.5 579 49.2
LjContig00439g0009782 Lotus japonicus HOM05D003430 ORTHO05D004809 1.1e-128 464.2 460 57.4
HanXRQChr11g0335431 Helianthus annuus HOM05D003430 ORTHO05D004809 2.2e-118 429.9 461 54.9
LjContig00446g0005008 Lotus japonicus HOM05D003430 ORTHO05D004809 2.2e-113 413.3 460 53.3
SHI42478 Sapria himalayana HOM05D003430 ORTHO05D004809 3.5e-111 406.0 546 47.4
Gorai.002G142200 Gossypium raimondii HOM05D003430 ORTHO05D004809 2.9e-110 402.9 350 62.9
Sopen00g002720 Solanum pennellii HOM05D003430 ORTHO05D004809 8.6e-110 401.4 284 74.3
Peaxi162Scf00456g00035 Petunia axillaris HOM05D003430 ORTHO05D004809 5.6e-109 398.7 335 66.3
Lj2C1222G64 Lonicera japonica HOM05D003430 ORTHO05D004809 7.0e-104 381.7 284 71.5
Sopen11g022460 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-100 370.5 266 72.9
SabraMtG0000400 Salix brachista HOM05D003430 ORTHO05D004809 4.4e-98 362.5 284 68.0
BraSC48t46245Z Brassica rapa HOM05D003430 ORTHO05D004809 1.7e-97 360.5 236 76.3
BraSC54t46373Z Brassica rapa HOM05D003430 ORTHO05D004809 1.7e-97 360.5 236 76.3
PGSC0003DMG400037371 Solanum tuberosum HOM05D003430 ORTHO05D004809 4.9e-97 359.0 273 70.3
Thhalv10002931m.g Eutrema salsugineum HOM05D003430 ORTHO05D004809 2.0e-95 353.6 442 50.2
Sc11g0004420 Simmondsia chinensis HOM05D003430 ORTHO05D004809 3.5e-95 352.8 271 69.0
Nn1g10089 Nelumbo nucifera HOM05D003430 ORTHO05D004809 1.3e-94 350.9 271 69.0
Gohir.D01G116901 Gossypium hirsutum HOM05D003430 ORTHO05D004809 2.3e-94 350.1 254 70.5
BolSC28t60411H Brassica oleracea HOM05D003430 ORTHO05D004809 5.0e-94 349.0 288 66.7
unitig_87.g27925 Utricularia gibba HOM05D003430 ORTHO05D004809 1.5e-93 347.4 284 68.0
AUR62042332 Chenopodium quinoa HOM05D003430 ORTHO05D004809 2.5e-93 346.7 271 69.0
MBI05_g40995_MAGBIO Magnolia biondii HOM05D003430 ORTHO05D004809 4.7e-92 342.4 463 45.6
SalBow1G3892 Salvia bowleyana HOM05D003430 ORTHO05D004809 6.2e-92 342.0 271 69.0
CDE02G0363 Ceratophyllum demersum HOM05D003430 ORTHO05D004809 3.7e-89 332.8 284 63.4
SabraMtG0000300 Salix brachista HOM05D003430 ORTHO05D004809 2.7e-87 326.6 196 80.1
Lalb_Chr00c39g0409071 Lupinus albus HOM05D003430 ORTHO05D004809 1.7e-86 323.9 280 64.3
Lalb_Chr00c39g0409251 Lupinus albus HOM05D003430 ORTHO05D004809 1.7e-86 323.9 280 64.3
Lalb_Chr00c51g0413171 Lupinus albus HOM05D003430 ORTHO05D004809 1.7e-86 323.9 280 64.3
Psat3g040120 Pisum sativum HOM05D003430 ORTHO05D004809 3.0e-86 323.2 275 65.5
BolSC28t60376H Brassica oleracea HOM05D003430 ORTHO05D004809 8.6e-86 321.6 197 78.7
Nn2g14911 Nelumbo nucifera HOM05D003430 ORTHO05D004809 8.6e-86 321.6 198 82.3
arahy.Tifrunner.gnm1.ann1.41QMJ9 Arachis hypogaea HOM05D003430 ORTHO05D004809 1.1e-85 321.2 288 62.8
arahy.Tifrunner.gnm1.ann1.AJMC4E Arachis hypogaea HOM05D003430 ORTHO05D004809 1.1e-85 321.2 288 62.8
COL.COLO4_04429 Corchorus olitorius HOM05D003430 ORTHO05D004809 1.5e-85 320.9 205 81.5
Lalb_Chr00c39g0409061 Lupinus albus HOM05D003430 ORTHO05D004809 2.5e-85 320.1 197 78.7
Lalb_Chr00c39g0409241 Lupinus albus HOM05D003430 ORTHO05D004809 2.5e-85 320.1 197 78.7
Lalb_Chr00c51g0413151 Lupinus albus HOM05D003430 ORTHO05D004809 2.5e-85 320.1 197 78.7
Lalb_Chr10g0094601 Lupinus albus HOM05D003430 ORTHO05D004809 3.3e-85 319.7 280 63.9
Sp3g25650 Schrenkiella parvula HOM05D003430 ORTHO05D004809 5.6e-85 318.9 254 68.1
Sc11g0004440 Simmondsia chinensis HOM05D003430 ORTHO05D004809 7.3e-85 318.5 189 81.0
Nitab4.5_0001152g0350 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.2e-84 317.8 188 82.4
BraSC77t46628Z Brassica rapa HOM05D003430 ORTHO05D004809 1.1e-83 314.7 219 71.2
VMungo0044G0002 Vigna mungo HOM05D003430 ORTHO05D004809 4.0e-83 312.8 266 65.4
arahy.Tifrunner.gnm1.ann1.13LUN9 Arachis hypogaea HOM05D003430 ORTHO05D004809 2.6e-82 310.1 197 75.6
arahy.Tifrunner.gnm1.ann1.2J3QCS Arachis hypogaea HOM05D003430 ORTHO05D004809 2.6e-82 310.1 197 75.6
arahy.Tifrunner.gnm1.ann1.4C4WEU Arachis hypogaea HOM05D003430 ORTHO05D004809 2.6e-82 310.1 197 75.6
Lsat_1_v5_gn_6_109000 Lactuca sativa HOM05D003430 ORTHO05D004809 6.4e-81 305.4 299 58.5
Zm00001eb435500 Zea mays HOM05D003430 ORTHO05D004809 1.9e-80 303.9 276 60.9
Zm00001eb436090 Zea mays HOM05D003430 ORTHO05D004809 1.9e-80 303.9 276 60.9
Zm00001eb437350 Zea mays HOM05D003430 ORTHO05D004809 1.9e-80 303.9 276 60.9
Zm00001eb440330 Zea mays HOM05D003430 ORTHO05D004809 1.9e-80 303.9 276 60.9
Zm00001eb440360 Zea mays HOM05D003430 ORTHO05D004809 1.9e-80 303.9 276 60.9
Zm00001eb442170 Zea mays HOM05D003430 ORTHO05D004809 1.9e-80 303.9 276 60.9
Medtr0024s0150 Medicago truncatula HOM05D003430 ORTHO05D004809 2.4e-80 303.5 202 72.8
Medtr0024s0140 Medicago truncatula HOM05D003430 ORTHO05D004809 4.1e-80 302.8 202 78.7
Hma1.2p1_1286F.1_g273040 Hydrangea macrophylla HOM05D003430 ORTHO05D004809 1.0e-78 298.1 254 66.1
ATR0559G258 Amborella trichopoda HOM05D003430 ORTHO05D004809 1.5e-77 294.3 189 75.1
arahy.Tifrunner.gnm1.ann1.ABQ8F7 Arachis hypogaea HOM05D003430 ORTHO05D004809 1.8e-75 287.3 266 61.3
arahy.Tifrunner.gnm1.ann1.CY2VCK Arachis hypogaea HOM05D003430 ORTHO05D004809 1.8e-75 287.3 266 61.3
SHI29635 Sapria himalayana HOM05D003430 ORTHO05D004809 3.1e-75 286.6 176 79.0
Sp3g25660 Schrenkiella parvula HOM05D003430 ORTHO05D004809 3.4e-74 283.1 197 71.6
unitig_87.g27923 Utricularia gibba HOM05D003430 ORTHO05D004809 7.6e-74 282.0 165 83.0
Cpa.g.c41010 Carica papaya HOM05D003430 ORTHO05D004809 1.4e-72 277.7 189 72.0
Zm00001eb435490 Zea mays HOM05D003430 ORTHO05D004809 2.4e-72 276.9 199 69.3
Zm00001eb436080 Zea mays HOM05D003430 ORTHO05D004809 2.4e-72 276.9 199 69.3
Lj2C1231G44 Lonicera japonica HOM05D003430 ORTHO05D004809 1.6e-71 274.2 267 59.6
Lj2C1222T70 Lonicera japonica HOM05D003430 ORTHO05D004809 3.5e-71 273.1 168 76.8
SHI29634 Sapria himalayana HOM05D003430 ORTHO05D004809 4.3e-69 266.2 284 56.0
arahy.Tifrunner.gnm1.ann1.Y9E1XU Arachis hypogaea HOM05D003430 ORTHO05D004809 3.5e-63 246.5 160 72.5
arahy.Tifrunner.gnm1.ann1.ZQA7LX Arachis hypogaea HOM05D003430 ORTHO05D004809 3.5e-63 246.5 157 73.9
VMungo0044G0003 Vigna mungo HOM05D003430 ORTHO05D004809 5.6e-61 239.2 166 70.5
RhsimMtG0004400 Rhododendron simsii HOM05D003430 ORTHO05D004809 1.4e-59 234.6 162 76.5
arahy.Tifrunner.gnm1.ann1.087TPC Arachis hypogaea HOM05D003430 ORTHO05D004809 1.8e-59 234.2 269 53.5
BcaC05g27378 Brassica carinata HOM05D003430 ORTHO05D004809 1.2e-58 231.5 145 81.4
Nitab4.5_0000172g0240 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.5e-58 231.1 233 57.1
CDE02G3943 Ceratophyllum demersum HOM05D003430 ORTHO05D004809 2.0e-58 230.7 159 70.4
Nitab4.5_0000172g1130 Nicotiana tabacum HOM05D003430 ORTHO05D004809 3.4e-58 229.9 183 65.0
Lj2C1222T53 Lonicera japonica HOM05D003430 ORTHO05D004809 3.2e-56 223.4 137 77.4
COL.COLO4_04428 Corchorus olitorius HOM05D003430 ORTHO05D004809 6.7e-54 215.7 146 77.4
Peaxi162Scf00456g00036 Petunia axillaris HOM05D003430 ORTHO05D004809 1.9e-53 214.2 111 91.0
Nitab4.5_0010559g0010 Nicotiana tabacum HOM05D003430 ORTHO05D004809 9.0e-51 205.3 112 88.4
Solyc11g039360.2 Solanum lycopersicum HOM05D003430 ORTHO05D004809 9.0e-51 205.3 112 88.4
Pp3c4_28970 Physcomitrium patens HOM05D003430 ORTHO05D004809 2.0e-50 204.1 200 59.5
Pp3c4_28972 Physcomitrium patens HOM05D003430 ORTHO05D004809 2.0e-50 204.1 200 59.5
SHI50824 Sapria himalayana HOM05D003430 ORTHO05D004809 2.0e-50 204.1 141 76.6
Solyc10g076630.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 4.5e-50 203.0 109 83.5
Aqoxy23s002 Aquilegia oxysepala HOM05D003430 ORTHO05D004809 1.0e-49 201.8 129 76.7
Lj6g0002337 Lotus japonicus HOM05D003430 ORTHO05D004809 3.5e-47 193.4 149 65.1
CAN.G600.1 Capsicum annuum HOM05D003430 ORTHO05D004809 7.9e-47 192.2 111 83.8
Lj2C1222G56 Lonicera japonica HOM05D003430 ORTHO05D004809 1.3e-46 191.4 179 60.9
Nitab4.5_0004256g0030 Nicotiana tabacum HOM05D003430 ORTHO05D004809 5.1e-46 189.5 112 83.9
BolSC28t60410H Brassica oleracea HOM05D003430 ORTHO05D004809 4.5e-42 176.4 144 59.0
BolC1t03461H Brassica oleracea HOM05D003430 ORTHO05D004809 6.7e-38 162.5 141 62.4
HanXRQChr11g0335401 Helianthus annuus HOM05D003430 ORTHO05D004809 2.6e-34 150.6 229 44.5
EL10Ac3g07005 Beta vulgaris HOM05D003430 ORTHO05D004809 4.5e-34 149.8 154 58.4
Nitab4.5_0000172g0960 Nicotiana tabacum HOM05D003430 ORTHO05D004809 2.9e-33 147.1 111 67.6
SHI04802 Sapria himalayana HOM05D003430 ORTHO05D004809 1.1e-32 145.2 195 49.2
arahy.Tifrunner.gnm1.ann1.0UJ9QK Arachis hypogaea HOM05D003430 ORTHO05D004809 2.5e-32 144.1 204 47.1
arahy.Tifrunner.gnm1.ann1.J6HUIG Arachis hypogaea HOM05D003430 ORTHO05D026951 3.3e-29 133.7 87 78.2
Lsat_1_v5_gn_5_16620 Lactuca sativa HOM05D003430 ORTHO05D004809 1.3e-28 131.7 172 48.8
SHI20518 Sapria himalayana HOM05D003430 ORTHO05D004809 1.3e-28 131.7 131 55.7
SHI31749 Sapria himalayana HOM05D003430 ORTHO05D004809 8.5e-25 119.0 80 76.2
Solyc05g025700.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 1.6e-23 114.8 109 56.0
SHI03773 Sapria himalayana HOM05D003430 ORTHO05D004809 2.3e-22 110.9 209 37.3
Lalb_Chr21g0308991 Lupinus albus HOM05D002109 ORTHO05D002149 7.0e-19 99.4 85 60.0
HPP92_026915 Vanilla planifolia HOM05D003430 ORTHO05D004809 1.3e-17 95.1 65 69.2
Solyc03g013370.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 2.9e-17 94.0 54 79.6
SHI20516 Sapria himalayana HOM05D003430 ORTHO05D004809 2.5e-16 90.9 71 66.2
SHI04803 Sapria himalayana HOM05D003430 ORTHO05D004809 2.3e-14 84.3 101 48.5
SHI25675 Sapria himalayana HOM05D003430 ORTHO05D004809 8.8e-14 82.4 77 54.5
SHI32119 Sapria himalayana HOM05D003430 ORTHO05D004809 1.1e-13 82.0 65 63.1
SHI25674 Sapria himalayana HOM05D003430 ORTHO05D004809 3.3e-13 80.5 59 67.8
TPR.G22979 Trifolium pratense HOM05D000681 ORTHO05D007906 3.7e-12 77.0 42 88.1
SGA_v2.0_scaffold178G39492 Striga asiatica HOM05D003430 ORTHO05D004809 8.2e-12 75.9 53 64.2
C01p34960 Brassica napus HOM05D003430 ORTHO05D004809 1.1e-11 75.5 117 42.7
TPR.G24362 Trifolium pratense HOM05D003430 ORTHO05D004809 2.7e-10 70.9 71 57.7
Nitab4.5_0001152g0410 Nicotiana tabacum HOM05D003430 ORTHO05D004809 3.5e-10 70.5 106 43.4
Prupe.5G026600 Prunus persica HOM05D003430 ORTHO05D004809 7.7e-10 69.3 68 51.5
Sabra12G0092700 Salix brachista HOM05D003430 ORTHO05D004809 1.0e-09 68.9 107 43.0
Nitab4.5_0000172g1190 Nicotiana tabacum HOM05D003430 ORTHO05D004809 2.2e-09 67.8 40 80.0
Nitab4.5_0000684g0110 Nicotiana tabacum HOM05D003430 ORTHO05D015169 2.2e-09 67.8 47 70.2
Solyc04g071020.1 Solanum lycopersicum HOM05D003430 ORTHO05D000314 5.0e-09 66.6 46 73.9
Solyc00g500167.1 Solanum lycopersicum HOM05D001426 ORTHO05D001389 8.5e-09 65.9 82 48.8
SHI33657 Sapria himalayana HOM05D003430 ORTHO05D004809 1.9e-08 64.7 45 66.7
SHI20517 Sapria himalayana HOM05D003430 ORTHO05D004809 2.5e-08 64.3 81 51.9
Nn044s41806 Nelumbo nucifera HOM05D003430 ORTHO05D004809 5.5e-08 63.2 64 59.4
Mapoly0017s0010 Marchantia polymorpha HOM05D003430 ORTHO05D004809 7.2e-08 62.8 58 58.6
Medtr8g091515 Medicago truncatula HOM05D003430 ORTHO05D004809 2.1e-07 61.2 35 80.0
Gohir.D01G117000 Gossypium hirsutum HOM05D003430 ORTHO05D004809 1.4e-06 58.5 64 50.0
AT2G07815 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 3.0e-06 57.4 35 77.1
BraSC54t46375Z Brassica rapa HOM05D003430 ORTHO05D004809 3.0e-06 57.4 35 77.1
BraSC77t46627Z Brassica rapa HOM05D003430 ORTHO05D004809 3.0e-06 57.4 35 77.1
Aqoxy4G00518 Aquilegia oxysepala HOM05D003430 ORTHO05D004809 4.0e-06 57.0 59 52.5


User provided reference genes

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