Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 1.1e-130 469.9 230 100.0
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 8.4e-115 417.2 248 84.3
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 1.4e-114 416.4 248 83.9
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 7.1e-114 414.1 248 83.1
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 7.4e-111 404.1 248 81.9
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 2.4e-101 372.5 249 75.9
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 2.2e-99 365.9 248 74.6
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 2.5e-98 362.5 249 73.5
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 1.2e-97 360.1 242 72.3
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 2.7e-97 359.0 248 72.2
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 6.1e-97 357.8 249 72.7
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 6.7e-96 354.4 242 70.2
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 1.1e-95 353.6 243 71.6
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 5.7e-95 351.3 241 71.8
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 1.7e-94 349.7 243 72.0
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 2.8e-94 349.0 243 72.0
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 2.8e-94 349.0 241 71.4
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 6.3e-94 347.8 241 70.5
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 1.4e-93 346.7 243 69.5
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 2.4e-93 345.9 243 70.4
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 5.3e-93 344.7 240 69.2
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 1.2e-92 343.6 245 69.4
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 3.5e-92 342.0 240 67.5
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 4.5e-92 341.7 241 70.5
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 4.5e-92 341.7 241 70.5
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 4.5e-92 341.7 242 70.7
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 5.9e-92 341.3 242 71.1
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 5.0e-91 338.2 242 69.4
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 8.5e-91 337.4 249 68.3
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 8.5e-91 337.4 245 68.2
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 1.1e-90 337.0 241 67.6
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 1.1e-90 337.0 240 67.9
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 2.5e-90 335.9 241 70.1
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 3.2e-90 335.5 239 69.5
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 3.2e-90 335.5 294 60.9
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 4.2e-90 335.1 243 67.5
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 9.4e-90 334.0 241 68.0
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 1.6e-89 333.2 243 67.1
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 4.7e-89 331.6 243 65.0
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 6.1e-89 331.3 248 66.9
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 8.0e-89 330.9 241 65.6
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 1.4e-88 330.1 241 66.0
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 3.9e-88 328.6 240 66.2
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 5.2e-88 328.2 237 68.4
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 1.5e-87 326.6 243 65.8
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 1.5e-87 326.6 242 68.2
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 4.4e-87 325.1 242 66.5
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 9.7e-87 323.9 242 67.8
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 1.3e-86 323.6 248 65.3
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 2.4e-85 319.3 242 65.3
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 5.3e-85 318.2 242 66.1
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 7.0e-85 317.8 242 66.5
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 2.0e-84 316.2 243 63.0
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 2.0e-84 316.2 243 63.0
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 2.6e-84 315.8 243 63.0
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 4.5e-84 315.1 243 63.0
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 5.9e-84 314.7 248 62.9
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 7.7e-84 314.3 240 62.9
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.3e-83 313.5 242 65.3
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 1.3e-83 313.5 246 65.4
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 2.2e-83 312.8 243 63.0
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 2.9e-83 312.4 249 63.9
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 3.8e-83 312.0 243 62.6
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 6.5e-83 311.2 248 62.9
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 2.5e-82 309.3 246 62.6
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 3.2e-82 308.9 248 62.9
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 2.1e-81 306.2 256 62.5
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 4.7e-81 305.1 243 63.0
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 4.7e-81 305.1 245 63.3
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 6.1e-81 304.7 241 63.9
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 1.8e-80 303.1 241 64.3
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 2.3e-80 302.8 183 80.9
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 4.0e-80 302.0 243 63.0
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 1.5e-79 300.1 243 62.6
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 3.3e-79 298.9 232 64.2
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 4.4e-79 298.5 245 62.0
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 9.7e-79 297.4 246 60.6
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 2.2e-78 296.2 244 63.1
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 3.5e-76 288.9 248 58.5
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 7.7e-76 287.7 276 56.5
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 2.9e-75 285.8 248 57.3
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 4.2e-74 282.0 249 61.4
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 2.7e-73 279.3 242 57.4
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 8.8e-72 274.2 237 57.0
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 2.6e-71 272.7 186 69.4
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 3.3e-66 255.8 184 64.1
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 2.1e-65 253.1 238 56.7
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 6.1e-65 251.5 183 68.3
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 1.4e-64 250.4 233 52.8
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 3.0e-64 249.2 233 52.4
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 1.0e-59 234.2 183 63.9
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 1.5e-58 230.3 239 46.9
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 5.6e-58 228.4 183 62.8
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 6.1e-57 224.9 240 47.1
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 6.1e-57 224.9 238 47.1
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 1.2e-55 220.7 183 61.2
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 1.2e-55 220.7 230 58.7
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 2.2e-54 216.5 182 59.9
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.4e-53 213.8 176 60.8
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 1.2e-52 210.7 181 59.1
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 5.0e-51 205.3 230 46.5
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 6.6e-51 204.9 252 42.1
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 1.9e-50 203.4 206 49.5
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 2.3e-48 196.4 239 42.7
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 1.4e-45 187.2 216 44.4
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.2e-44 184.1 179 55.9
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 1.5e-42 177.2 99 74.7
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 7.5e-39 164.9 148 50.7
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 1.9e-34 150.2 180 40.6
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 1.7e-30 137.1 208 35.1
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 4.2e-29 132.5 182 39.0
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 1.7e-19 100.5 270 25.2
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 3.0e-19 99.8 106 55.7


User provided reference genes

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