Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 2.1e-62 242.3 131 100.0
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 7.1e-58 227.3 131 92.4
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 1.9e-55 219.2 128 91.4
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 8.1e-54 213.8 129 88.4
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 1.8e-53 212.6 129 88.4
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 2.3e-53 212.2 129 88.4
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 7.1e-50 200.7 125 85.6
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 6.6e-40 167.5 132 71.2
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 4.8e-38 161.4 127 68.5
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 2.6e-36 155.6 128 64.8
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 1.3e-35 153.3 123 67.5
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 2.9e-35 152.1 124 62.9
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 2.9e-35 152.1 126 66.7
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 3.8e-35 151.8 125 61.6
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 1.2e-33 146.7 127 63.0
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 1.6e-33 146.4 127 62.2
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 2.1e-33 146.0 123 64.2
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 2.1e-33 146.0 128 62.5
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 2.7e-33 145.6 126 63.5
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 2.7e-33 145.6 139 59.0
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 4.6e-33 144.8 138 63.0
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 7.9e-33 144.1 127 63.0
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 1.7e-32 142.9 126 60.3
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 3.9e-32 141.7 128 61.7
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 6.6e-32 141.0 124 61.3
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 8.7e-32 140.6 127 63.0
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 1.1e-31 140.2 127 59.8
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 1.9e-31 139.4 125 58.4
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 2.5e-31 139.0 124 63.7
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 3.3e-31 138.7 127 62.2
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 4.3e-31 138.3 127 60.6
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 5.6e-31 137.9 128 58.6
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 5.6e-31 137.9 114 64.9
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 2.8e-30 135.6 123 60.2
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 3.6e-30 135.2 123 59.3
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 4.8e-30 134.8 132 56.1
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 8.1e-30 134.0 130 56.2
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 1.4e-29 133.3 134 56.7
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 1.8e-29 132.9 126 57.9
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 3.1e-29 132.1 128 56.2
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 4.0e-29 131.7 127 57.5
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 4.0e-29 131.7 127 57.5
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 9.0e-29 130.6 123 58.5
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 9.0e-29 130.6 125 56.8
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 9.0e-29 130.6 159 48.4
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 1.2e-28 130.2 132 54.5
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 1.5e-28 129.8 127 58.3
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 1.5e-28 129.8 126 54.0
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 2.6e-28 129.0 125 56.8
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 2.6e-28 129.0 126 57.1
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 3.4e-28 128.6 127 56.7
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 4.5e-28 128.3 115 60.9
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 5.8e-28 127.9 127 55.1
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 7.6e-28 127.5 128 57.0
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 7.6e-28 127.5 127 55.1
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 7.6e-28 127.5 127 53.5
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 7.6e-28 127.5 127 55.9
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 7.6e-28 127.5 127 55.9
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 1.3e-27 126.7 127 55.1
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 1.7e-27 126.3 152 49.3
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 2.9e-27 125.6 126 54.0
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 2.9e-27 125.6 124 55.6
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 2.9e-27 125.6 125 53.6
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 3.8e-27 125.2 140 52.1
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 3.8e-27 125.2 124 55.6
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 4.9e-27 124.8 127 53.5
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 6.4e-27 124.4 127 54.3
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 6.4e-27 124.4 123 53.7
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 8.4e-27 124.0 126 54.8
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.1e-26 123.6 130 56.2
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 1.4e-26 123.2 128 54.7
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 1.4e-26 123.2 125 52.8
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 3.2e-26 122.1 129 54.3
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 7.1e-26 120.9 126 54.8
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 1.2e-25 120.2 126 54.8
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 2.1e-25 119.4 138 49.3
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 2.7e-25 119.0 127 55.1
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 2.7e-25 119.0 141 51.1
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 2.7e-25 119.0 131 51.9
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 3.5e-25 118.6 127 52.0
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 4.6e-25 118.2 128 52.3
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 6.0e-25 117.9 129 51.9
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 1.0e-24 117.1 127 52.8
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 1.0e-24 117.1 124 52.4
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 1.0e-24 117.1 124 52.4
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 1.0e-24 117.1 124 52.4
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 1.3e-24 116.7 129 51.9
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 1.8e-24 116.3 127 52.8
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 2.3e-24 115.9 127 53.5
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 3.0e-24 115.5 124 50.0
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 3.9e-24 115.2 118 54.2
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 5.1e-24 114.8 124 50.0
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 6.7e-24 114.4 129 49.6
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 2.1e-22 109.4 78 64.1
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 3.7e-22 108.6 129 49.6
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 2.4e-21 105.9 124 47.6
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 2.6e-20 102.4 81 63.0
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 2.6e-20 102.4 103 54.4
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 2.6e-20 102.4 158 39.9
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 1.3e-19 100.1 91 53.8
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 2.5e-18 95.9 99 50.5
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 2.1e-17 92.8 79 54.4
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 5.1e-16 88.2 124 44.4
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 5.1e-16 88.2 124 43.5
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 1.1e-15 87.0 102 45.1
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 2.5e-15 85.9 82 52.4
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 2.0e-12 76.3 111 48.6
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 4.5e-12 75.1 122 41.0
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 7.6e-12 74.3 115 39.1
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 1.7e-11 73.2 115 40.0
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 8.4e-11 70.9 96 41.7
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 2.7e-09 65.9 98 41.8
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 2.7e-09 65.9 98 41.8
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 4.6e-09 65.1 91 48.4
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 2.3e-08 62.8 87 43.7
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 1.9e-07 59.7 87 42.5
Actinidia40026 Actinidia chinensis HOM05D006467 ORTHO05D008012 2.5e-07 59.3 63 58.7
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 2.5e-07 59.3 87 42.5
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 5.7e-07 58.2 89 41.6


User provided reference genes

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