Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 3.8e-160 568.2 295 100.0
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 3.7e-99 365.5 311 64.6
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 1.1e-98 364.0 303 66.3
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 1.7e-96 356.7 303 64.7
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 1.8e-93 346.7 308 63.0
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 4.6e-89 332.0 314 59.6
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 3.3e-87 325.9 314 59.2
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 5.8e-84 315.1 302 58.9
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 8.4e-83 311.2 314 56.7
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 1.9e-82 310.1 304 57.9
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 2.4e-82 309.7 314 57.0
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 5.3e-77 292.0 314 51.6
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 4.4e-76 288.9 302 52.3
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 4.4e-76 288.9 308 54.5
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 1.6e-73 280.4 314 49.4
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 1.7e-72 276.9 314 49.4
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 6.6e-72 275.0 320 47.5
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 7.3e-71 271.6 336 45.8
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 4.0e-69 265.8 352 44.0
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 4.2e-66 255.8 312 48.7
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 1.6e-65 253.8 314 46.8
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 4.6e-65 252.3 302 47.7
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 3.7e-62 242.7 287 48.4
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 1.5e-60 237.3 333 42.9
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 1.5e-60 237.3 315 44.8
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 2.2e-59 233.4 314 44.9
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 3.5e-57 226.1 324 42.6
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 7.9e-57 224.9 313 42.8
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 1.3e-56 224.2 315 45.1
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 3.9e-56 222.6 302 44.7
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 5.1e-56 222.2 328 43.6
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 5.1e-56 222.2 319 40.8
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 1.5e-55 220.7 231 53.2
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 1.9e-55 220.3 310 43.9
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 9.6e-55 218.0 306 44.4
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 9.6e-55 218.0 306 43.1
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 3.7e-54 216.1 301 42.9
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 1.4e-53 214.2 337 41.8
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 1.8e-53 213.8 311 42.1
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 3.1e-53 213.0 315 41.9
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 4.0e-53 212.6 310 42.3
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 6.9e-53 211.8 301 42.9
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 9.0e-53 211.5 314 41.4
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 1.2e-52 211.1 312 41.0
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 2.6e-52 209.9 306 42.2
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 3.4e-52 209.5 297 41.4
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 4.5e-52 209.1 246 49.6
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 4.5e-52 209.1 314 40.1
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 7.6e-52 208.4 301 41.5
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 1.0e-51 208.0 295 42.0
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 1.0e-51 208.0 314 41.7
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 2.9e-51 206.5 302 40.7
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 2.9e-51 206.5 296 41.2
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 6.5e-51 205.3 287 43.2
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 6.5e-51 205.3 306 41.5
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 6.5e-51 205.3 310 42.3
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 8.4e-51 204.9 314 40.1
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 8.4e-51 204.9 365 36.4
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 1.4e-50 204.1 310 41.9
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 2.5e-50 203.4 314 40.4
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 4.2e-50 202.6 341 40.2
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 2.7e-49 199.9 315 40.3
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 2.7e-49 199.9 299 43.1
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 3.5e-49 199.5 320 39.7
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 7.9e-49 198.4 308 41.6
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 1.3e-48 197.6 302 40.7
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 1.3e-48 197.6 291 41.6
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 8.7e-48 194.9 239 48.1
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 1.1e-47 194.5 239 48.1
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 3.3e-47 193.0 310 41.0
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 4.3e-47 192.6 299 39.8
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 5.7e-47 192.2 299 39.8
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 5.7e-47 192.2 341 35.8
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 2.8e-46 189.9 361 36.8
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 3.7e-46 189.5 299 38.1
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 3.7e-46 189.5 303 39.3
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 4.8e-46 189.1 307 38.8
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 6.3e-46 188.7 305 38.4
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.1e-45 188.0 299 39.1
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.4e-45 187.6 295 36.9
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 6.9e-45 185.3 305 38.4
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 2.6e-44 183.3 305 40.0
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 3.4e-44 183.0 296 37.2
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 5.9e-44 182.2 336 37.5
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 7.7e-44 181.8 224 47.8
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.3e-43 181.0 278 41.0
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 2.2e-43 180.3 312 38.1
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 3.8e-43 179.5 313 37.7
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 5.0e-43 179.1 304 37.5
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.1e-42 177.9 294 38.1
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 2.5e-42 176.8 278 41.0
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 4.2e-42 176.0 241 40.7
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 5.5e-42 175.6 302 36.8
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 1.2e-41 174.5 349 35.0
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 2.1e-41 173.7 311 37.6
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 6.1e-41 172.2 305 37.7
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 7.9e-41 171.8 266 40.2
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 1.8e-40 170.6 301 37.5
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.8e-40 170.6 260 38.1
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 1.8e-40 170.6 310 38.4
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 2.3e-40 170.2 303 37.6
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 3.0e-40 169.9 226 42.5
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 2.0e-39 167.2 305 38.0
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 7.4e-39 165.2 320 35.3
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 1.7e-38 164.1 304 37.5
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 2.8e-38 163.3 316 36.7
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 6.3e-38 162.2 305 37.0
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 6.3e-38 162.2 280 36.1
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 8.2e-38 161.8 255 40.0
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 1.1e-37 161.4 183 47.5
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 1.4e-37 161.0 304 37.8
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 6.9e-37 158.7 193 45.6
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 4.5e-36 156.0 191 46.1
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 5.9e-36 155.6 248 38.7
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 7.7e-36 155.2 303 36.3
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 2.9e-35 153.3 304 35.2
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 3.8e-35 152.9 304 35.2
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 3.8e-35 152.9 304 35.2
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 3.8e-35 152.9 273 37.0
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 7.2e-34 148.7 291 35.1
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 1.6e-33 147.5 263 35.7
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 3.6e-33 146.4 309 35.3
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 7.9e-33 145.2 302 34.8
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 2.3e-32 143.7 307 35.2
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 2.3e-32 143.7 308 35.7
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 4.8e-30 136.0 268 36.6
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 1.7e-27 127.5 181 42.5
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 3.8e-27 126.3 137 45.3
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 8.5e-27 125.2 278 34.9
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 2.7e-25 120.2 204 35.3
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 3.0e-24 116.7 161 40.4
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 2.6e-23 113.6 234 32.1
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 2.8e-22 110.2 298 32.2
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 9.1e-21 105.1 191 32.5
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 7.2e-18 95.5 92 50.0
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 7.2e-18 95.5 171 35.1
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 9.4e-18 95.1 180 31.7
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 2.7e-17 93.6 149 38.3
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 1.8e-16 90.9 118 39.0
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 2.3e-16 90.5 209 31.6
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 6.8e-16 89.0 160 35.0
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 1.5e-15 87.8 82 52.4
Pp3c3_37370 Physcomitrium patens HOM05D004617 ORTHO05D005531 2.6e-15 87.0 118 39.0
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 9.1e-13 78.6 151 29.1
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 1.7e-11 74.3 103 37.9
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 2.9e-11 73.6 106 34.0
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 3.2e-10 70.1 103 36.9
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 3.2e-10 70.1 103 36.9
PRCOL_00005442 Prasinoderma coloniale HOM05D004617 ORTHO05D005531 2.1e-09 67.4 113 35.4
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 1.4e-08 64.7 148 28.4
Cre16.g658600 Chlamydomonas reinhardtii HOM05D004617 ORTHO05D005531 1.3e-06 58.2 118 29.7


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