Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 1.0e-83 313.5 179 100.0
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 8.2e-49 197.6 167 77.8
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 1.1e-40 170.6 126 73.0
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 4.4e-34 148.7 126 69.0
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 4.4e-34 148.7 126 69.0
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 5.3e-32 141.7 126 68.3
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 2.5e-29 132.9 126 63.5
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 1.3e-25 120.6 132 56.8
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 2.2e-25 119.8 129 55.8
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 2.2e-25 119.8 129 55.8
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 6.3e-25 118.2 130 57.7
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 1.1e-24 117.5 128 55.5
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 1.8e-24 116.7 141 50.4
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 3.1e-24 115.9 133 55.6
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 3.1e-24 115.9 131 53.4
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 4.1e-24 115.5 128 54.7
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 9.1e-24 114.4 128 51.6
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 1.2e-23 114.0 127 51.2
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 2.0e-23 113.2 129 50.4
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 2.6e-23 112.8 128 60.9
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 5.9e-23 111.7 128 51.6
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 5.9e-23 111.7 152 44.1
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 7.7e-23 111.3 131 49.6
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 7.7e-23 111.3 127 53.5
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 7.7e-23 111.3 131 53.4
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 1.0e-22 110.9 128 51.6
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 1.3e-22 110.5 128 53.9
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 1.7e-22 110.2 127 52.0
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 3.8e-22 109.0 129 48.1
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 5.0e-22 108.6 127 52.8
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 5.0e-22 108.6 128 48.4
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 5.0e-22 108.6 128 48.4
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 5.0e-22 108.6 129 53.5
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 6.5e-22 108.2 126 55.6
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 8.5e-22 107.8 129 55.0
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 1.5e-21 107.1 133 52.6
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 1.5e-21 107.1 126 48.4
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 1.5e-21 107.1 126 48.4
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 1.9e-21 106.7 130 56.2
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 1.9e-21 106.7 131 51.9
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 2.5e-21 106.3 138 49.3
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 2.5e-21 106.3 129 52.7
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 2.5e-21 106.3 73 76.7
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 3.2e-21 105.9 128 50.8
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 3.2e-21 105.9 129 51.9
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 3.2e-21 105.9 128 50.0
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 4.2e-21 105.5 127 51.2
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 4.2e-21 105.5 126 50.0
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 4.2e-21 105.5 130 49.2
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 7.2e-21 104.8 127 51.2
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 7.2e-21 104.8 130 48.5
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.6e-20 103.6 134 47.0
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 2.1e-20 103.2 126 48.4
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 3.6e-20 102.4 126 48.4
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 3.6e-20 102.4 129 48.1
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 3.6e-20 102.4 130 53.1
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 4.7e-20 102.1 134 47.0
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 4.7e-20 102.1 126 57.1
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 4.7e-20 102.1 129 48.1
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 6.1e-20 101.7 129 49.6
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 1.0e-19 100.9 126 48.4
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.4e-19 100.5 161 42.9
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 1.4e-19 100.5 129 48.1
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 1.8e-19 100.1 127 49.6
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 1.8e-19 100.1 126 44.4
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 3.0e-19 99.4 129 48.8
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 4.0e-19 99.0 126 47.6
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 6.8e-19 98.2 129 50.4
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 6.8e-19 98.2 127 50.4
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 8.8e-19 97.8 126 48.4
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 8.8e-19 97.8 129 48.8
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 8.8e-19 97.8 129 48.8
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 8.8e-19 97.8 132 47.0
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 1.2e-18 97.4 126 49.2
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.2e-18 97.4 129 50.4
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 1.2e-18 97.4 126 50.0
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 5.7e-18 95.1 125 45.6
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 5.7e-18 95.1 129 48.1
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 7.5e-18 94.7 127 45.7
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 7.5e-18 94.7 126 48.4
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 7.5e-18 94.7 129 48.1
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 9.8e-18 94.4 125 44.8
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 9.8e-18 94.4 133 45.9
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 9.8e-18 94.4 127 46.5
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 1.3e-17 94.0 130 48.5
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 1.7e-17 93.6 129 46.5
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 3.7e-17 92.4 129 48.8
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 4.8e-17 92.0 129 45.7
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 1.4e-16 90.5 128 44.5
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 1.4e-16 90.5 129 45.0
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 1.8e-16 90.1 127 46.5
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 1.8e-16 90.1 129 42.6
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 2.4e-16 89.7 130 44.6
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 3.1e-16 89.4 128 44.5
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 7.0e-16 88.2 129 43.4
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 7.0e-16 88.2 125 43.2
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 7.0e-16 88.2 126 46.0
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 7.0e-16 88.2 130 43.1
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 7.0e-16 88.2 73 64.4
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 1.2e-15 87.4 125 45.6
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 1.2e-15 87.4 125 44.0
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 1.6e-15 87.0 126 48.4
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 3.5e-15 85.9 125 44.0
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 5.9e-15 85.1 125 46.4
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 5.9e-15 85.1 56 75.0
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 5.9e-15 85.1 126 44.4
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 7.7e-15 84.7 130 43.8
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 1.0e-14 84.3 125 42.4
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 1.0e-14 84.3 125 42.4
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 1.0e-14 84.3 125 42.4
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 1.0e-14 84.3 125 42.4
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 1.0e-14 84.3 128 43.0
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 1.7e-14 83.6 125 40.8
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 6.5e-14 81.6 130 44.6
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 8.5e-14 81.3 125 41.6
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 1.5e-13 80.5 122 43.4
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 9.4e-13 77.8 132 40.2
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 1.6e-12 77.0 124 40.3
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 1.6e-12 77.0 53 67.9
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 8.0e-12 74.7 52 67.3
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 1.8e-11 73.6 125 40.0
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 3.0e-11 72.8 130 39.2
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 8.8e-11 71.2 128 39.1
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 8.8e-11 71.2 60 53.3
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 2.0e-10 70.1 128 38.3
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 8.3e-09 64.7 69 53.6
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 7.0e-08 61.6 118 39.0


User provided reference genes

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