Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003898g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 2.2e-148 528.9 249 100.0
Nitab4.5_0007469g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 3.1e-78 295.8 273 55.3
Nitab4.5_0000157g0070 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.7e-76 290.0 268 57.1
Nitab4.5_0000157g0110 Nicotiana tabacum HOM05D000007 ORTHO05D007252 3.8e-76 288.9 252 58.7
PGSC0003DMG400008507 Solanum tuberosum HOM05D000007 ORTHO05D007252 2.7e-66 256.1 154 76.0
Hma1.2p1_0022F.1_g014760 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 9.9e-61 237.7 269 45.7
Nitab4.5_0000157g0100 Nicotiana tabacum HOM05D000007 ORTHO05D007252 8.4e-60 234.6 264 48.1
Actinidia38511 Actinidia chinensis HOM05D000007 ORTHO05D007252 1.9e-59 233.4 270 45.2
Oeu044692.1 Olea europaea HOM05D000007 ORTHO05D007252 2.3e-57 226.5 271 45.8
MSTRG.5952 Avicennia marina HOM05D000007 ORTHO05D007252 4.8e-55 218.8 274 45.3
Nitab4.5_0001504g0060 Nicotiana tabacum HOM05D000007 ORTHO05D007252 6.2e-55 218.4 166 63.3
Rhsim07G0245000 Rhododendron simsii HOM05D001026 ORTHO05D007252 2.4e-54 216.5 270 45.6
Rhsim03G0268000 Rhododendron simsii HOM05D000007 ORTHO05D007252 3.1e-54 216.1 270 45.2
SGA_v2.0_scaffold31G12737 Striga asiatica HOM05D000007 ORTHO05D007252 6.4e-52 208.4 273 42.9
Migut.J00822 Erythranthe guttata HOM05D000007 ORTHO05D007252 1.3e-47 194.1 246 45.1
Nitab4.5_0001504g0050 Nicotiana tabacum HOM05D004526 ORTHO05D005548 3.0e-41 172.9 135 62.2
Nitab4.5_0007469g0030 Nicotiana tabacum HOM05D000007 ORTHO05D007252 2.1e-34 150.2 153 54.2
Oeu028485.1 Olea europaea HOM05D000007 ORTHO05D007252 5.7e-32 142.1 191 41.9
Nitab4.5_0000053g0200 Nicotiana tabacum HOM05D000007 ORTHO05D007252 3.4e-29 132.9 150 46.7
Dinv26480 Davidia involucrata HOM05D009844 ORTHO05D007252 5.0e-28 129.0 229 31.4
Ciclev10033438m.g Citrus clementina HOM05D000007 ORTHO05D007252 1.8e-22 110.5 255 29.4
Dinv41199 Davidia involucrata HOM05D001519 ORTHO05D001403 1.2e-21 107.8 271 30.3
MBI19_g35549_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 3.4e-21 106.3 261 31.4
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 4.5e-21 105.9 277 28.9
Dinv21217 Davidia involucrata HOM05D000007 ORTHO05D007252 5.9e-21 105.5 266 29.3
EL10Ac2g04216 Beta vulgaris HOM05D031416 ORTHO05D007252 6.5e-20 102.1 256 28.1
MBI19_g26733_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 6.5e-20 102.1 273 29.3
Dinv18626 Davidia involucrata HOM05D009844 ORTHO05D007252 1.1e-19 101.3 292 28.1
Dinv26242 Davidia involucrata HOM05D009844 ORTHO05D007252 1.1e-19 101.3 292 28.1
AUR62012379 Chenopodium quinoa HOM05D031416 ORTHO05D007252 1.4e-19 100.9 263 28.1
Nitab4.5_0007469g0020 Nicotiana tabacum HOM05D000007 ORTHO05D007252 3.2e-19 99.8 85 56.5
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.2e-19 99.8 281 26.3
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.2e-19 99.4 281 26.3
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 5.5e-19 99.0 265 29.1
Oeu056889.1 Olea europaea HOM05D000007 ORTHO05D007252 5.5e-19 99.0 273 26.4
MBI19_g00242_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 3.6e-18 96.3 227 30.8
TAR371G1268 Trochodendron aralioides HOM05D000007 ORTHO05D007252 8.0e-18 95.1 237 28.7
Hma1.2p1_0084F.1_g043690 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 1.4e-17 94.4 272 27.9
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.4e-17 94.4 247 28.7
Dinv26455 Davidia involucrata HOM05D000007 ORTHO05D013933 1.8e-17 94.0 282 26.6
Oeu014895.1 Olea europaea HOM05D000007 ORTHO05D007252 6.7e-17 92.0 277 27.1
TAR371G0392 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.0e-16 90.5 271 27.7
COL.COLO4_36676 Corchorus olitorius HOM05D000007 ORTHO05D007252 4.4e-16 89.4 280 29.6
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.3e-15 87.8 228 27.6
Migut.J01047 Erythranthe guttata HOM05D000007 ORTHO05D007252 3.7e-15 86.3 280 25.4
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.3e-15 85.5 226 27.9
Cpa.g.sc3466.1 Carica papaya HOM05D000007 ORTHO05D007252 8.2e-15 85.1 250 26.0
COL.COLO4_04270 Corchorus olitorius HOM05D000007 ORTHO05D007252 1.4e-14 84.3 262 29.0
TAR371G0593 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.3e-14 82.4 218 28.4
TAR371G0647 Trochodendron aralioides HOM05D000007 ORTHO05D007252 7.0e-14 82.0 224 29.0
Sc16g0011260 Simmondsia chinensis HOM05D038559 ORTHO05D007252 1.6e-13 80.9 160 33.8
Duzib041G0312 Durio zibethinus HOM05D000007 ORTHO05D000017 3.5e-13 79.7 282 28.7
Ah.06g193900 Amaranthus hybridus HOM05D038559 ORTHO05D007252 4.5e-13 79.3 200 29.5
TAR375G0745 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.5e-13 79.3 262 28.6
Ah.10g035830 Amaranthus hybridus HOM05D031416 ORTHO05D007252 7.7e-13 78.6 251 25.9
Actinidia38508 Actinidia chinensis HOM05D000007 ORTHO05D013933 1.3e-12 77.8 170 29.4
Gorai.010G008800 Gossypium raimondii HOM05D000007 ORTHO05D000017 1.3e-12 77.8 195 32.3
Peaxi162Scf00783g00335 Petunia axillaris HOM05D009844 ORTHO05D007252 1.7e-12 77.4 238 27.7
Gohir.D06G004200 Gossypium hirsutum HOM05D000007 ORTHO05D000017 2.2e-12 77.0 197 31.0
Peaxi162Scf00618g10023 Petunia axillaris HOM05D009844 ORTHO05D007252 2.9e-12 76.6 266 25.9
TAR374G0551 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.8e-12 76.3 280 25.7
CiPaw.09G103100 Carya illinoinensis HOM05D000007 ORTHO05D000017 5.0e-12 75.9 196 29.1
Gohir.A06G008600 Gossypium hirsutum HOM05D000007 ORTHO05D000017 5.0e-12 75.9 195 30.3
Nn2g13281 Nelumbo nucifera HOM05D000007 ORTHO05D000017 1.1e-11 74.7 252 27.4
Sopen09g036270 Solanum pennellii HOM05D009844 ORTHO05D007252 1.1e-11 74.7 291 23.7
TAR371G1227 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.9e-11 73.9 125 34.4
Aqoxy5G00679 Aquilegia oxysepala HOM05D000171 ORTHO05D000101 2.5e-11 73.6 224 29.5
Gohir.D08G025866 Gossypium hirsutum HOM05D000007 ORTHO05D000017 4.2e-11 72.8 206 27.7
Gorai.004G021900 Gossypium raimondii HOM05D000007 ORTHO05D000017 4.2e-11 72.8 206 27.7
Duzib168G0318 Durio zibethinus HOM05D000007 ORTHO05D000017 5.5e-11 72.4 212 27.8
Peaxi162Scf00324g00083 Petunia axillaris HOM05D013374 ORTHO05D013933 5.5e-11 72.4 169 29.6
Solyc09g098350.4 Solanum lycopersicum HOM05D009844 ORTHO05D007252 5.5e-11 72.4 248 23.8
TAR371G1173 Trochodendron aralioides HOM05D000007 ORTHO05D007252 7.2e-11 72.0 121 34.7
Aqoxy4G02064 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 2.1e-10 70.5 274 24.8
Potri.013G093100 Populus trichocarpa HOM05D000007 ORTHO05D007252 3.6e-10 69.7 242 24.4
TAR371G0362 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.6e-10 69.7 125 33.6
TAR375G0750 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.6e-10 69.7 232 26.3
CAN.G1076.9 Capsicum annuum HOM05D009844 ORTHO05D007252 1.0e-09 68.2 152 32.2
AUR62031523 Chenopodium quinoa HOM05D031416 ORTHO05D007252 1.0e-09 68.2 163 27.0
Thecc.08G030700 Theobroma cacao HOM05D000007 ORTHO05D000017 1.4e-09 67.8 212 32.1
CiPaw.14G115500 Carya illinoinensis HOM05D000007 ORTHO05D003666 4.0e-09 66.2 151 33.1
Nitab4.5_0000762g0130 Nicotiana tabacum HOM05D013374 ORTHO05D013933 4.0e-09 66.2 140 30.0
Peaxi162Scf00129g01225 Petunia axillaris HOM05D009844 ORTHO05D007252 4.0e-09 66.2 139 28.8
Peaxi162Scf00185g00710 Petunia axillaris HOM05D009844 ORTHO05D007252 4.0e-09 66.2 98 34.7
Peaxi162Scf00185g00820 Petunia axillaris HOM05D009844 ORTHO05D007252 4.0e-09 66.2 98 34.7
Dinv36193 Davidia involucrata HOM05D003981 ORTHO05D003666 5.2e-09 65.9 69 47.8
Aqoxy4G00367 Aquilegia oxysepala HOM05D000007 ORTHO05D018413 6.7e-09 65.5 198 29.8
Lj4A649T29 Lonicera japonica HOM05D013022 ORTHO05D007252 6.7e-09 65.5 262 26.0
Lj4A650T22 Lonicera japonica HOM05D013022 ORTHO05D007252 6.7e-09 65.5 258 26.0
Lj4A648G14 Lonicera japonica HOM05D013022 ORTHO05D007252 8.8e-09 65.1 260 25.8
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 8.8e-09 65.1 174 30.5
DCAR_004306 Daucus carota HOM05D000007 ORTHO05D000017 1.2e-08 64.7 148 31.1
Sc16g0011270 Simmondsia chinensis HOM05D038559 ORTHO05D007252 1.5e-08 64.3 109 35.8
TAR371G0023 Trochodendron aralioides HOM05D000007 ORTHO05D022563 1.5e-08 64.3 97 34.0
MBI19_g46422_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 2.0e-08 63.9 184 31.5
TAR374G0955 Trochodendron aralioides HOM05D013022 ORTHO05D007252 2.0e-08 63.9 169 24.9
Cfa009862 Carpinus fangiana HOM05D003981 ORTHO05D003666 3.3e-08 63.2 139 31.7
COL.COLO4_10484 Corchorus olitorius HOM05D013022 ORTHO05D007252 3.3e-08 63.2 194 25.8
TAR371G0432 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.3e-08 63.2 185 25.9
vmacro01993 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 4.4e-08 62.8 144 33.3
CAN.G628.68 Capsicum annuum HOM05D009844 ORTHO05D007252 9.7e-08 61.6 135 31.1
QL07p033575 Quercus lobata HOM05D000007 ORTHO05D003666 1.3e-07 61.2 122 31.1
Atru.chr1.2424 Acer truncatum HOM05D000007 ORTHO05D000017 2.2e-07 60.5 120 30.8
Atru.chr1.2426 Acer truncatum HOM05D000007 ORTHO05D000017 2.2e-07 60.5 120 30.8
Aqoxy6G01619 Aquilegia oxysepala HOM05D021765 ORTHO05D018413 2.8e-07 60.1 134 30.6
Nitab4.5_0000762g0110 Nicotiana tabacum HOM05D013374 ORTHO05D013933 2.8e-07 60.1 193 26.4
Nitab4.5_0000883g0210 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.8e-07 60.1 195 26.7
PSO339G4553 Papaver somniferum HOM05D000007 ORTHO05D000017 2.8e-07 60.1 185 28.1
Prupe.4G203700 Prunus persica HOM05D008227 ORTHO05D010399 2.8e-07 60.1 224 27.7
QL08p033970 Quercus lobata HOM05D000007 ORTHO05D003666 2.8e-07 60.1 159 27.0
PGSC0003DMG400008522 Solanum tuberosum HOM05D013374 ORTHO05D013933 3.7e-07 59.7 118 29.7
Nitab4.5_0003898g0040 Nicotiana tabacum HOM05D013374 ORTHO05D013933 6.3e-07 58.9 89 34.8
AUR62012551 Chenopodium quinoa HOM05D000007 ORTHO05D000017 8.2e-07 58.5 140 27.1
Aqoxy6G01750 Aquilegia oxysepala HOM05D021765 ORTHO05D018413 1.1e-06 58.2 137 32.1
AL2G29880 Arabidopsis lyrata HOM05D011922 ORTHO05D007252 1.1e-06 58.2 263 22.4
PSO210G2197 Papaver somniferum HOM05D000007 ORTHO05D000676 1.1e-06 58.2 225 26.7
QL08p013277 Quercus lobata HOM05D008227 ORTHO05D010399 1.1e-06 58.2 171 25.7
CSS0037710 Camellia sinensis var. sinensis HOM05D000171 ORTHO05D009073 1.4e-06 57.8 112 33.9
Haze_23198 Corylus avellana HOM05D000007 ORTHO05D003666 1.4e-06 57.8 112 33.0
Haze_25176 Corylus avellana HOM05D000007 ORTHO05D003666 1.4e-06 57.8 98 33.7
Manes.11G003000 Manihot esculenta HOM05D000171 ORTHO05D000101 1.4e-06 57.8 138 27.5
QL05p054335 Quercus lobata HOM05D000007 ORTHO05D003666 1.4e-06 57.8 76 40.8
Atru.chr9.1609 Acer truncatum HOM05D003981 ORTHO05D003666 1.8e-06 57.4 96 28.1
A03p07240 Brassica napus HOM05D000007 ORTHO05D000017 1.8e-06 57.4 156 28.2
Solyc12g098170.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.8e-06 57.4 142 31.7
Migut.C01211 Erythranthe guttata HOM05D000007 ORTHO05D000521 2.4e-06 57.0 202 28.2
Gohir.A08G015180 Gossypium hirsutum HOM05D000007 ORTHO05D000017 2.4e-06 57.0 156 24.4
Aqoxy5G00722 Aquilegia oxysepala HOM05D021765 ORTHO05D018413 3.1e-06 56.6 103 33.0
Aqoxy5G01432 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.1e-06 56.6 159 26.4
CiPaw.13G152900 Carya illinoinensis HOM05D000007 ORTHO05D003666 3.1e-06 56.6 111 31.5
FAN06G0403 Fragaria x ananassa HOM05D000007 ORTHO05D000017 3.1e-06 56.6 231 25.1
RcHm_v2.0_Chr5g0001381 Rosa chinensis HOM05D000007 ORTHO05D000017 4.1e-06 56.2 156 25.0
Actinidia24334 Actinidia chinensis HOM05D003981 ORTHO05D003666 7.0e-06 55.5 73 42.5
CANSAT11G1705 Cannabis sativa HOM05D037756 ORTHO05D024747 7.0e-06 55.5 160 27.5
CARHR029830 Cardamine hirsuta HOM05D000171 ORTHO05D000101 7.0e-06 55.5 186 27.4
Dinv16550 Davidia involucrata HOM05D000171 ORTHO05D000101 7.0e-06 55.5 145 26.9
FvH4_5g31300 Fragaria vesca HOM05D007726 ORTHO05D008819 7.0e-06 55.5 193 26.4
FAN18G2255 Fragaria x ananassa HOM05D007726 ORTHO05D008819 7.0e-06 55.5 193 26.4
Actinidia06940 Actinidia chinensis HOM05D003981 ORTHO05D003666 9.1e-06 55.1 80 33.8
QL04p069725 Quercus lobata HOM05D000007 ORTHO05D000521 9.1e-06 55.1 114 30.7


User provided reference genes

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