Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003889g0030 Nicotiana tabacum HOM05D005547 ORTHO05D006887 2.8e-48 194.9 96 100.0
CAN.G458.10 Capsicum annuum HOM05D005547 ORTHO05D006887 4.0e-42 174.5 101 86.1
Ah.03g147190 Amaranthus hybridus HOM05D005547 ORTHO05D006887 8.9e-42 173.3 98 88.8
Solyc04g008490.2 Solanum lycopersicum HOM05D005547 ORTHO05D006887 8.9e-42 173.3 101 86.1
Sopen04g003640 Solanum pennellii HOM05D005547 ORTHO05D006887 8.9e-42 173.3 101 86.1
Rhsim09G0081900 Rhododendron simsii HOM05D005547 ORTHO05D006887 1.3e-40 169.5 105 81.0
Oeu024849.1 Olea europaea HOM05D005547 ORTHO05D006887 2.2e-40 168.7 103 82.5
THA.LOC104824108 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 2.2e-40 168.7 101 84.2
Nitab4.5_0000129g0490 Nicotiana tabacum HOM05D005547 ORTHO05D006887 3.7e-40 167.9 105 81.0
ClCG11G000640 Citrullus lanatus HOM05D005547 ORTHO05D006887 4.9e-40 167.5 97 85.6
Nitab4.5_0001091g0130 Nicotiana tabacum HOM05D005547 ORTHO05D006887 6.3e-40 167.2 105 80.0
MSTRG.13653 Avicennia marina HOM05D005547 ORTHO05D006887 1.1e-39 166.4 101 86.1
Ca_11205_v3 Cicer arietinum L. HOM05D005547 ORTHO05D006887 4.1e-39 164.5 103 80.6
TWI77G0905 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 4.1e-39 164.5 104 81.7
Cpa.g.sc2.79 Carica papaya HOM05D005547 ORTHO05D006887 5.4e-39 164.1 103 83.5
Lsat_1_v5_gn_5_36641 Lactuca sativa HOM05D005547 ORTHO05D006887 5.4e-39 164.1 98 83.7
THA.LOC104805110 Tarenaya hassleriana HOM05D005547 ORTHO05D006887 5.4e-39 164.1 101 82.2
Ciclev10017277m.g Citrus clementina HOM05D005547 ORTHO05D006887 9.2e-39 163.3 104 80.8
HanXRQChr12g0365891 Helianthus annuus HOM05D005547 ORTHO05D006887 9.2e-39 163.3 100 82.0
PGR142G0372 Punica granatum HOM05D005547 ORTHO05D006887 9.2e-39 163.3 99 83.8
TWI53G0286 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 9.2e-39 163.3 104 82.7
TWI77G0558 Tripterygium wilfordii HOM05D005547 ORTHO05D006887 9.2e-39 163.3 104 80.8
Lalb_Chr21g0306901 Lupinus albus HOM05D005547 ORTHO05D006887 1.2e-38 162.9 103 80.6
PSO063G0668 Papaver somniferum HOM05D005547 ORTHO05D006887 1.2e-38 162.9 101 81.2
Sed0021722 Sechium edule HOM05D005547 ORTHO05D006887 1.6e-38 162.5 100 81.0
SGA_v2.0_scaffold65G22157 Striga asiatica HOM05D005547 ORTHO05D006887 1.6e-38 162.5 101 80.2
CANSAT78G0133 Cannabis sativa HOM05D005547 ORTHO05D006887 2.0e-38 162.2 101 81.2
COL.COLO4_27546 Corchorus olitorius HOM05D005547 ORTHO05D006887 2.0e-38 162.2 99 82.8
Gohir.A03G114100 Gossypium hirsutum HOM05D005547 ORTHO05D006887 2.0e-38 162.2 103 81.6
Gohir.D02G138400 Gossypium hirsutum HOM05D005547 ORTHO05D006887 2.0e-38 162.2 103 81.6
Gorai.005G154900 Gossypium raimondii HOM05D005547 ORTHO05D006887 2.0e-38 162.2 103 81.6
Gorai.005G155000 Gossypium raimondii HOM05D005547 ORTHO05D006887 2.0e-38 162.2 103 81.6
Sed0015045 Sechium edule HOM05D005547 ORTHO05D006887 2.0e-38 162.2 100 80.0
MELO3C022540.2 Cucumis melo HOM05D005547 ORTHO05D006887 3.5e-38 161.4 97 83.5
Psat6g231800 Pisum sativum HOM05D005547 ORTHO05D006887 4.5e-38 161.0 103 79.6
BcaB07g30360 Brassica carinata HOM05D005547 ORTHO05D006887 5.9e-38 160.6 104 76.9
Duzib248G0639 Durio zibethinus HOM05D005547 ORTHO05D006887 5.9e-38 160.6 103 81.6
Duzib251G0939 Durio zibethinus HOM05D005547 ORTHO05D006887 5.9e-38 160.6 103 81.6
PSO782G2712 Papaver somniferum HOM05D005547 ORTHO05D006887 5.9e-38 160.6 101 79.2
Sc03g0005980 Simmondsia chinensis HOM05D005547 ORTHO05D006887 5.9e-38 160.6 99 82.8
Thecc.02G300400 Theobroma cacao HOM05D005547 ORTHO05D006887 5.9e-38 160.6 103 81.6
Duzib268G1003 Durio zibethinus HOM05D005547 ORTHO05D006887 7.8e-38 160.2 103 80.6
CSS0022085 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 1.0e-37 159.8 101 80.2
CSS0041328 Camellia sinensis var. sinensis HOM05D005547 ORTHO05D006887 1.0e-37 159.8 101 80.2
CiPaw.06G057000 Carya illinoinensis HOM05D005547 ORTHO05D006887 1.0e-37 159.8 102 80.4
Gohir.D02G138500 Gossypium hirsutum HOM05D005547 ORTHO05D006887 1.0e-37 159.8 103 80.6
BcaC04g21537 Brassica carinata HOM05D005547 ORTHO05D006887 1.3e-37 159.5 103 78.6
BcaC06g31254 Brassica carinata HOM05D005547 ORTHO05D006887 1.3e-37 159.5 103 78.6
BcaC06g31255 Brassica carinata HOM05D005547 ORTHO05D006887 1.3e-37 159.5 103 78.6
BcaC06g34084 Brassica carinata HOM05D005547 ORTHO05D006887 1.3e-37 159.5 103 78.6
A06p43870 Brassica napus HOM05D005547 ORTHO05D006887 1.3e-37 159.5 103 78.6
A09p23740 Brassica napus HOM05D005547 ORTHO05D006887 1.3e-37 159.5 103 78.6
C07p32870 Brassica napus HOM05D005547 ORTHO05D006887 1.3e-37 159.5 103 78.6
C09p30580 Brassica napus HOM05D005547 ORTHO05D006887 1.3e-37 159.5 103 78.6
BolC7t43802H Brassica oleracea HOM05D005547 ORTHO05D006887 1.3e-37 159.5 103 78.6
BolC9t55922H Brassica oleracea HOM05D005547 ORTHO05D006887 1.3e-37 159.5 103 78.6
BraA06t27263Z Brassica rapa HOM05D005547 ORTHO05D006887 1.3e-37 159.5 103 78.6
BraA09t37975Z Brassica rapa HOM05D005547 ORTHO05D006887 1.3e-37 159.5 103 78.6
Cfa015074 Carpinus fangiana HOM05D005547 ORTHO05D006887 1.3e-37 159.5 101 79.2
Thhalv10005178m.g Eutrema salsugineum HOM05D005547 ORTHO05D006887 1.3e-37 159.5 103 78.6
Sp2g13460 Schrenkiella parvula HOM05D005547 ORTHO05D006887 1.3e-37 159.5 103 78.6
Eucgr.B02628 Eucalyptus grandis HOM05D005547 ORTHO05D006887 1.7e-37 159.1 107 74.8
Manes.17G091700 Manihot esculenta HOM05D005547 ORTHO05D006887 1.7e-37 159.1 103 79.6
MSTRG.2096 Avicennia marina HOM05D005547 ORTHO05D006887 2.3e-37 158.7 101 78.2
Phvul.007G019800 Phaseolus vulgaris HOM05D005547 ORTHO05D006887 2.3e-37 158.7 99 82.8
Potri.010G099900 Populus trichocarpa HOM05D005547 ORTHO05D006887 2.3e-37 158.7 102 78.4
Prupe.1G340400 Prunus persica HOM05D005547 ORTHO05D006887 2.3e-37 158.7 103 77.7
Migut.D01210 Erythranthe guttata HOM05D005547 ORTHO05D006887 2.9e-37 158.3 105 76.2
Manes.15G140700 Manihot esculenta HOM05D005547 ORTHO05D006887 3.9e-37 157.9 103 78.6
TPR.G2488 Trifolium pratense HOM05D005547 ORTHO05D006887 3.9e-37 157.9 107 75.7
Atru.chr11.1034 Acer truncatum HOM05D005547 ORTHO05D006887 5.0e-37 157.5 102 77.5
ATR0807G170 Amborella trichopoda HOM05D005547 ORTHO05D006887 5.0e-37 157.5 100 77.0
Medtr1g112480 Medicago truncatula HOM05D005547 ORTHO05D006887 5.0e-37 157.5 106 77.4
unitig_699.g19647 Utricularia gibba HOM05D005547 ORTHO05D006887 5.0e-37 157.5 101 78.2
Lalb_Chr02g0143381 Lupinus albus HOM05D005547 ORTHO05D006887 6.6e-37 157.1 103 76.7
Haze_11478 Corylus avellana HOM05D005547 ORTHO05D006887 1.1e-36 156.4 101 77.2
MBI06_g29243_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 1.1e-36 156.4 100 78.0
Nn8g41124 Nelumbo nucifera HOM05D005547 ORTHO05D006887 1.1e-36 156.4 101 78.2
Potri.008G141900 Populus trichocarpa HOM05D005547 ORTHO05D006887 1.1e-36 156.4 102 77.5
Ah.02g120230 Amaranthus hybridus HOM05D005547 ORTHO05D006887 1.5e-36 156.0 98 80.6
Glyma.20G108500 Glycine max HOM05D005547 ORTHO05D006887 1.5e-36 156.0 99 77.8
QL03p040577 Quercus lobata HOM05D005547 ORTHO05D006887 1.5e-36 156.0 101 78.2
QL03p040948 Quercus lobata HOM05D005547 ORTHO05D006887 1.5e-36 156.0 101 78.2
DCAR_002637 Daucus carota HOM05D005547 ORTHO05D006887 1.9e-36 155.6 97 80.4
Sabra08G0107500 Salix brachista HOM05D005547 ORTHO05D006887 1.9e-36 155.6 101 76.2
TAR295G0002 Trochodendron aralioides HOM05D005547 ORTHO05D006887 3.3e-36 154.8 103 76.7
TAR622G1295 Trochodendron aralioides HOM05D005547 ORTHO05D006887 3.3e-36 154.8 103 76.7
Lj5g0000051 Lotus japonicus HOM05D005547 ORTHO05D006887 4.3e-36 154.5 100 77.0
AL5G11260 Arabidopsis lyrata HOM05D005547 ORTHO05D006887 7.3e-36 153.7 104 73.1
A02p32590 Brassica napus HOM05D005547 ORTHO05D006887 7.3e-36 153.7 103 75.7
Gohir.A03G114000 Gossypium hirsutum HOM05D005547 ORTHO05D006887 1.2e-35 152.9 103 77.7
MD13G1013300 Malus domestica HOM05D005547 ORTHO05D006887 1.2e-35 152.9 103 74.8
Nitab4.5_0000944g0080 Nicotiana tabacum HOM05D005547 ORTHO05D006887 1.2e-35 152.9 73 100.0
Sabra10G0072400 Salix brachista HOM05D005547 ORTHO05D006887 1.2e-35 152.9 102 76.5
Hma1.2p1_0068F.1_g037220 Hydrangea macrophylla HOM05D005547 ORTHO05D006887 2.8e-35 151.8 98 79.6
MBI06_g19635_MAGBIO Magnolia biondii HOM05D005547 ORTHO05D006887 2.8e-35 151.8 96 78.1
Peaxi162Scf00025g00059 Petunia axillaris HOM05D005547 ORTHO05D006887 3.6e-35 151.4 80 91.2
MD16G1010200 Malus domestica HOM05D005547 ORTHO05D006887 6.1e-35 150.6 103 72.8
AT2G02050 Arabidopsis thaliana HOM05D005547 ORTHO05D006887 8.0e-35 150.2 104 72.1
Carub.0005s0107 Capsella rubella HOM05D005547 ORTHO05D006887 8.0e-35 150.2 103 75.7
AUR62003480 Chenopodium quinoa HOM05D005547 ORTHO05D006887 1.0e-34 149.8 89 84.3
CARHR144680 Cardamine hirsuta HOM05D005547 ORTHO05D006887 1.8e-34 149.1 103 75.7
AUR62017789 Chenopodium quinoa HOM05D005547 ORTHO05D006887 4.0e-34 147.9 89 83.1
BcaB07g30717 Brassica carinata HOM05D005547 ORTHO05D006887 5.2e-34 147.5 88 80.7
BcaB07g30718 Brassica carinata HOM05D005547 ORTHO05D006887 5.2e-34 147.5 88 80.7
Aa31LG2G7900 Aethionema arabicum HOM05D000012 ORTHO05D000567 6.8e-34 147.1 80 87.5
SalBow2G0745 Salvia bowleyana HOM05D005547 ORTHO05D006887 1.5e-33 146.0 92 79.3
Zm00001eb002320 Zea mays HOM05D005547 ORTHO05D006887 7.5e-33 143.7 93 77.4
SHI04242 Sapria himalayana HOM05D005547 ORTHO05D006887 1.3e-32 142.9 100 72.0
FAN07G0567 Fragaria x ananassa HOM05D005547 ORTHO05D006887 4.9e-32 141.0 106 67.9
FAN17G0411 Fragaria x ananassa HOM05D005547 ORTHO05D006887 4.9e-32 141.0 106 67.9
FvH4_4g35970 Fragaria vesca HOM05D005547 ORTHO05D006887 8.3e-32 140.2 106 67.9
FAN12G1717 Fragaria x ananassa HOM05D005547 ORTHO05D006887 8.3e-32 140.2 106 67.9
RcHm_v2.0_Chr4g0445601 Rosa chinensis HOM05D005547 ORTHO05D006887 8.3e-32 140.2 103 70.9
FAN22G0273 Fragaria x ananassa HOM05D005547 ORTHO05D006887 1.4e-31 139.4 106 67.0
HPP92_022540 Vanilla planifolia HOM05D005547 ORTHO05D006887 2.4e-31 138.7 88 78.4
Os03g0129900 Oryza sativa ssp. japonica HOM05D005547 ORTHO05D006887 9.2e-31 136.7 95 68.4
ECA233G2357 Erigeron canadensis HOM05D005547 ORTHO05D006887 3.5e-30 134.8 91 73.6
Cc11_g05010 Coffea canephora HOM05D005547 ORTHO05D006887 7.8e-30 133.7 69 88.4
MD17G1273300 Malus domestica HOM05D005547 ORTHO05D006887 1.9e-28 129.0 73 82.2
arahy.Tifrunner.gnm1.ann1.VES97W Arachis hypogaea HOM05D005547 ORTHO05D006887 3.3e-28 128.3 70 82.9
Mapoly0058s0109 Marchantia polymorpha HOM05D005547 ORTHO05D006887 4.1e-23 111.3 70 71.4
Pp3c14_25130 Physcomitrium patens HOM05D005547 ORTHO05D006887 5.4e-23 110.9 73 68.5
Pp3c10_11190 Physcomitrium patens HOM05D005547 ORTHO05D006887 4.6e-22 107.8 79 64.6
Haze_10731 Corylus avellana HOM05D005547 ORTHO05D006887 7.8e-22 107.1 85 62.4
C02p50170 Brassica napus HOM05D005547 ORTHO05D006887 2.5e-20 102.1 68 75.0
BolC2t11096H Brassica oleracea HOM05D005547 ORTHO05D006887 2.5e-20 102.1 68 75.0
GSVIVG01000609001 Vitis vinifera HOM05D005547 ORTHO05D006887 6.2e-19 97.4 57 80.7
BcaC03g17109 Brassica carinata HOM05D005547 ORTHO05D006887 1.1e-18 96.7 54 83.3
arahy.Tifrunner.gnm1.ann1.FEK9G3 Arachis hypogaea HOM05D005547 ORTHO05D006887 1.4e-18 96.3 64 64.1
CBR_g4786 Chara braunii HOM05D005547 ORTHO05D006887 2.6e-17 92.0 71 56.3
SMO356G0087 Selaginella moellendorffii HOM05D005547 ORTHO05D006887 1.7e-16 89.4 65 58.5
MCO06G054 Micromonas commoda HOM05D005547 ORTHO05D006887 1.1e-15 86.7 55 65.5
Glyma.14G132200 Glycine max HOM05D005547 ORTHO05D006887 3.2e-15 85.1 101 56.4
Gorai.002G169600 Gossypium raimondii HOM05D005547 ORTHO05D006887 4.1e-15 84.7 103 53.4
PRCOL_00006370 Prasinoderma coloniale HOM05D005547 ORTHO05D006887 4.9e-08 61.2 67 46.3


User provided reference genes

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