Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.7e-174 615.9 323 100.0
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 9.6e-157 557.0 336 90.2
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 1.9e-141 506.1 327 83.5
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 2.5e-141 505.8 324 83.3
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 9.6e-141 503.8 324 83.3
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 3.4e-138 495.4 306 85.0
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 2.9e-137 492.3 328 81.1
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 3.4e-93 345.9 327 59.0
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 9.8e-93 344.4 324 59.6
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 9.8e-93 344.4 332 57.5
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 2.8e-92 342.8 340 57.1
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 7.0e-91 338.2 311 58.8
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 5.9e-90 335.1 345 55.1
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.3e-89 334.0 328 57.9
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 3.8e-89 332.4 321 59.8
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 5.0e-89 332.0 337 56.4
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 4.2e-88 328.9 329 57.4
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 4.2e-88 328.9 333 57.4
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 7.2e-88 328.2 315 58.4
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 9.5e-88 327.8 329 59.3
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 9.5e-88 327.8 355 54.9
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 1.2e-87 327.4 327 56.6
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 1.6e-87 327.0 337 54.0
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 2.8e-87 326.2 344 54.9
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 3.0e-86 322.8 342 54.4
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 4.0e-86 322.4 339 57.2
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 8.9e-86 321.2 350 54.6
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 8.9e-86 321.2 338 55.6
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.5e-85 320.5 344 53.5
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 1.5e-85 320.5 344 53.5
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 5.7e-85 318.5 347 52.7
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 1.3e-84 317.4 326 56.1
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 6.3e-84 315.1 312 59.9
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 6.3e-84 315.1 321 57.9
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 2.4e-83 313.2 308 58.8
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.4e-83 313.2 312 59.6
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 5.4e-83 312.0 313 58.5
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 7.0e-83 311.6 340 53.2
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 9.2e-83 311.2 309 59.2
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 1.6e-82 310.5 331 53.5
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 2.0e-82 310.1 340 52.6
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 2.0e-82 310.1 317 56.5
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 2.7e-82 309.7 332 55.1
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 3.5e-82 309.3 331 52.9
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 4.5e-82 308.9 361 50.4
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 5.9e-82 308.5 317 54.3
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.3e-81 307.4 308 58.8
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 2.3e-81 306.6 352 49.7
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 2.3e-81 306.6 347 50.4
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 2.3e-81 306.6 305 57.4
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 3.8e-81 305.8 343 51.0
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 6.6e-81 305.1 359 52.4
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 8.6e-81 304.7 354 48.9
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 8.6e-81 304.7 345 50.4
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.5e-80 303.9 335 53.1
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 1.9e-80 303.5 349 54.2
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 2.5e-80 303.1 334 50.6
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 2.5e-80 303.1 334 50.6
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 2.5e-80 303.1 321 54.5
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 2.5e-80 303.1 346 52.6
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 3.3e-80 302.8 328 54.9
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 4.3e-80 302.4 337 51.3
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 9.5e-80 301.2 328 51.5
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 9.5e-80 301.2 337 50.7
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 9.5e-80 301.2 321 55.8
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 2.1e-79 300.1 346 49.7
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 2.1e-79 300.1 323 52.6
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 2.8e-79 299.7 321 50.5
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 4.7e-79 298.9 328 50.3
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 1.0e-78 297.7 353 49.3
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 5.2e-78 295.4 311 55.0
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.2e-77 294.3 339 54.0
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 1.5e-77 293.9 310 55.2
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 2.0e-77 293.5 300 56.7
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 2.2e-76 290.0 324 51.2
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 8.3e-76 288.1 437 43.5
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 1.8e-75 287.0 348 47.4
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 7.0e-75 285.0 347 48.7
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 2.7e-74 283.1 297 54.9
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 3.0e-73 279.6 325 53.2
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 8.6e-73 278.1 331 48.6
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 1.9e-72 276.9 319 52.0
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 4.3e-72 275.8 333 49.5
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 9.5e-72 274.6 335 47.2
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 2.1e-71 273.5 335 49.0
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.1e-67 261.2 330 50.3
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 2.0e-66 256.9 376 44.9
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 6.6e-65 251.9 307 49.2
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 3.3e-64 249.6 248 56.9
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 1.6e-63 247.3 247 55.5
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 9.9e-61 238.0 289 49.5
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 2.1e-58 230.3 379 38.8
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 5.1e-57 225.7 248 53.6
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 2.0e-45 187.2 381 39.6
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 4.2e-43 179.5 184 53.3
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 4.2e-43 179.5 234 51.3
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 1.3e-39 167.9 364 34.9
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 1.3e-36 157.9 135 60.0
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 1.2e-34 151.4 288 38.9
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 2.7e-34 150.2 379 30.1
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 6.0e-34 149.1 217 47.5
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 5.1e-25 119.4 164 48.2
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 9.6e-24 115.2 221 36.7
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 6.2e-23 112.5 98 59.2
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 6.9e-22 109.0 473 24.5
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 7.6e-21 105.5 130 47.7
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 6.5e-20 102.4 81 66.7
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 3.2e-19 100.1 123 48.8
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 2.1e-18 97.4 62 75.8
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 2.5e-16 90.5 238 29.8
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 4.3e-16 89.7 168 39.9
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 2.8e-15 87.0 72 62.5
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 3.1e-14 83.6 232 28.4
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 1.3e-12 78.2 250 24.4
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 1.7e-12 77.8 61 63.9
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 3.2e-11 73.6 59 61.0
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.7e-10 70.5 58 60.3
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 1.1e-08 65.1 40 70.0
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 3.3e-08 63.5 47 63.8


User provided reference genes

Program Settings