Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0003888g0010 Nicotiana tabacum HOM05D013332 ORTHO05D004477 5.2e-45 184.1 100 100.0
Nitab4.5_0000241g0190 Nicotiana tabacum HOM05D008176 ORTHO05D004477 7.5e-44 180.3 100 98.0
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 1.9e-34 149.1 102 79.4
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 1.5e-31 139.4 99 75.8
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 2.5e-31 138.7 102 75.5
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 4.3e-31 137.9 103 74.8
Sopen05g029890 Solanum pennellii HOM05D008176 ORTHO05D004477 7.1e-18 94.0 95 65.3
PGSC0003DMG400016792 Solanum tuberosum HOM05D008176 ORTHO05D004477 5.1e-16 87.8 81 67.9
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 1.5e-15 86.3 102 58.8
Nitab4.5_0000128g0240 Nicotiana tabacum HOM05D008176 ORTHO05D004477 9.6e-15 83.6 77 68.8
PGSC0003DMG400016791 Solanum tuberosum HOM05D008176 ORTHO05D004477 2.7e-09 65.5 100 47.0
Sopen05g029880 Solanum pennellii HOM05D008176 ORTHO05D004477 3.0e-08 62.0 97 47.4
FAN19G2695 Fragaria x ananassa HOM05D013332 ORTHO05D004477 2.5e-07 58.9 84 46.4
FAN23G0907 Fragaria x ananassa HOM05D013332 ORTHO05D004477 4.3e-07 58.2 108 41.7
RcHm_v2.0_Chr2g0112381 Rosa chinensis HOM05D013332 ORTHO05D004477 7.4e-07 57.4 106 38.7
FAN28G1274 Fragaria x ananassa HOM05D013332 ORTHO05D004477 1.6e-06 56.2 108 40.7
FAN26G3011 Fragaria x ananassa HOM05D013332 ORTHO05D004477 2.8e-06 55.5 108 40.7
FvH4_1g20240 Fragaria vesca HOM05D013332 ORTHO05D004477 3.7e-06 55.1 84 40.5
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 3.7e-06 55.1 98 46.9
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 6.2e-06 54.3 93 47.3


User provided reference genes

Program Settings